SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5nfb'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Q23_I_FUAI707_1
(CHLORAMPHENICOL
ACETYLTRANSFERASE)
5nfb GALECTIN-3
(Homo
sapiens)
3 / 3 VAL A 155
ALA A 156
HIS A 223
None
0.76A 1q23G-5nfbA:
undetectable
1q23G-5nfbA:
21.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Q23_L_FUAL710_1
(CHLORAMPHENICOL
ACETYLTRANSFERASE)
5nfb GALECTIN-3
(Homo
sapiens)
3 / 3 VAL A 155
ALA A 156
HIS A 223
None
0.64A 1q23J-5nfbA:
undetectable
1q23J-5nfbA:
21.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ZZ1_B_SHHB2552_1
(HISTONE
DEACETYLASE-LIKE
AMIDOHYDROLASE)
5nfb GALECTIN-3
(Homo
sapiens)
5 / 12 ILE A 171
PHE A 192
ASP A 239
GLY A 238
PHE A 190
None
1.23A 1zz1B-5nfbA:
undetectable
1zz1C-5nfbA:
undetectable
1zz1B-5nfbA:
18.78
1zz1C-5nfbA:
18.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2F6D_A_ACRA996_1
(GLUCOAMYLASE GLU1)
5nfb GALECTIN-3
(Homo
sapiens)
4 / 7 ASN A 214
ASP A 215
THR A 243
GLY A 136
None
1.01A 2f6dA-5nfbA:
undetectable
2f6dA-5nfbA:
16.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3APW_A_DP0A190_1
(ALPHA-1-ACID
GLYCOPROTEIN 2)
5nfb GALECTIN-3
(Homo
sapiens)
5 / 12 PHE A 157
VAL A 211
PHE A 190
PHE A 163
ALA A 146
None
1.50A 3apwA-5nfbA:
undetectable
3apwA-5nfbA:
20.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BJW_A_SVRA508_1
(PHOSPHOLIPASE A2)
5nfb GALECTIN-3
(Homo
sapiens)
4 / 5 VAL A 172
PHE A 149
ARG A 186
ARG A 169
None
None
8VT  A 301 (-3.4A)
None
1.43A 3bjwE-5nfbA:
undetectable
3bjwE-5nfbA:
19.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GAL_A_1GNA998_1
(GALECTIN-7)
5nfb GALECTIN-3
(Homo
sapiens)
6 / 6 HIS A 158
ASN A 160
ARG A 162
ASN A 174
TRP A 181
GLU A 184
8VT  A 301 (-3.9A)
8VT  A 301 (-4.0A)
8VT  A 301 (-2.7A)
8VT  A 301 (-3.8A)
8VT  A 301 ( 3.7A)
8VT  A 301 (-2.7A)
0.21A 3galA-5nfbA:
22.9
3galA-5nfbA:
29.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GAL_B_1GNB999_1
(GALECTIN-7)
5nfb GALECTIN-3
(Homo
sapiens)
6 / 6 HIS A 158
ASN A 160
ARG A 162
ASN A 174
TRP A 181
GLU A 184
8VT  A 301 (-3.9A)
8VT  A 301 (-4.0A)
8VT  A 301 (-2.7A)
8VT  A 301 (-3.8A)
8VT  A 301 ( 3.7A)
8VT  A 301 (-2.7A)
0.29A 3galB-5nfbA:
23.1
3galB-5nfbA:
29.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NU4_B_478B401_1
(PROTEASE)
5nfb GALECTIN-3
(Homo
sapiens)
5 / 9 ALA A 156
ASP A 154
GLY A 235
VAL A 126
ILE A 231
None
1.06A 3nu4A-5nfbA:
undetectable
3nu4A-5nfbA:
17.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NUO_B_478B478_1
(PROTEASE)
5nfb GALECTIN-3
(Homo
sapiens)
5 / 9 ALA A 156
ASP A 154
GLY A 235
VAL A 126
ILE A 231
None
1.10A 3nuoA-5nfbA:
undetectable
3nuoA-5nfbA:
17.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3Q1E_C_T44C128_1
(5-HYDROXYISOURATE
HYDROLASE)
5nfb GALECTIN-3
(Homo
sapiens)
4 / 6 LEU A 218
LEU A 219
LEU A 147
PRO A 161
None
1.04A 3q1eA-5nfbA:
undetectable
3q1eC-5nfbA:
undetectable
3q1eA-5nfbA:
23.30
3q1eC-5nfbA:
23.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BYJ_A_OQRA302_0
(SULFOTRANSFERASE)
5nfb GALECTIN-3
(Homo
sapiens)
5 / 12 PHE A 198
ILE A 200
GLY A 235
PHE A 159
LEU A 242
None
0.96A 5byjA-5nfbA:
undetectable
5byjA-5nfbA:
22.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5I71_A_68PA701_1
(SODIUM-DEPENDENT
SEROTONIN
TRANSPORTER)
5nfb GALECTIN-3
(Homo
sapiens)
5 / 12 ASP A 215
ILE A 200
PHE A 192
LEU A 219
GLY A 136
None
1.04A 5i71A-5nfbA:
undetectable
5i71A-5nfbA:
14.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5I75_A_68PA701_1
(SODIUM-DEPENDENT
SEROTONIN
TRANSPORTER)
5nfb GALECTIN-3
(Homo
sapiens)
5 / 12 ASP A 215
ILE A 200
PHE A 192
LEU A 219
GLY A 136
None
1.05A 5i75A-5nfbA:
undetectable
5i75A-5nfbA:
14.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M0O_A_EPAA502_1
(TERMINAL
OLEFIN-FORMING FATTY
ACID DECARBOXYLASE)
5nfb GALECTIN-3
(Homo
sapiens)
5 / 10 LEU A 122
ILE A 231
ALA A 156
PHE A 209
VAL A 202
None
0.95A 5m0oA-5nfbA:
undetectable
5m0oA-5nfbA:
17.39
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6B8K_A_W9TA300_0
(GALECTIN-3)
5nfb GALECTIN-3
(Homo
sapiens)
4 / 7 ARG A 186
ASN A 166
GLU A 165
ARG A 162
8VT  A 301 (-3.4A)
None
8VT  A 301 (-3.5A)
8VT  A 301 (-2.7A)
1.28A 6b8kA-5nfbA:
29.9
6b8kA-5nfbA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6B8K_A_W9TA300_0
(GALECTIN-3)
5nfb GALECTIN-3
(Homo
sapiens)
7 / 7 HIS A 158
ASN A 160
ARG A 162
ASN A 174
TRP A 181
GLU A 184
ARG A 186
8VT  A 301 (-3.9A)
8VT  A 301 (-4.0A)
8VT  A 301 (-2.7A)
8VT  A 301 (-3.8A)
8VT  A 301 ( 3.7A)
8VT  A 301 (-2.7A)
8VT  A 301 (-3.4A)
0.09A 6b8kA-5nfbA:
29.9
6b8kA-5nfbA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6B94_A_W9TA201_0
(GALECTIN-1)
5nfb GALECTIN-3
(Homo
sapiens)
7 / 8 HIS A 158
ASN A 160
ARG A 162
ASN A 174
TRP A 181
GLU A 184
ARG A 186
8VT  A 301 (-3.9A)
8VT  A 301 (-4.0A)
8VT  A 301 (-2.7A)
8VT  A 301 (-3.8A)
8VT  A 301 ( 3.7A)
8VT  A 301 (-2.7A)
8VT  A 301 (-3.4A)
0.48A 6b94A-5nfbA:
19.8
6b94A-5nfbA:
37.63
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6B94_B_W9TB201_0
(GALECTIN-1)
5nfb GALECTIN-3
(Homo
sapiens)
7 / 10 HIS A 158
ASN A 160
ARG A 162
ASN A 174
TRP A 181
GLU A 184
ARG A 186
8VT  A 301 (-3.9A)
8VT  A 301 (-4.0A)
8VT  A 301 (-2.7A)
8VT  A 301 (-3.8A)
8VT  A 301 ( 3.7A)
8VT  A 301 (-2.7A)
8VT  A 301 (-3.4A)
0.34A 6b94A-5nfbA:
19.8
6b94B-5nfbA:
19.4
6b94A-5nfbA:
37.63
6b94B-5nfbA:
37.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DEB_B_MTXB302_1
(BIFUNCTIONAL PROTEIN
FOLD)
5nfb GALECTIN-3
(Homo
sapiens)
5 / 12 LEU A 242
LEU A 120
PRO A 121
ILE A 132
VAL A 202
None
1.21A 6debB-5nfbA:
undetectable
6debB-5nfbA:
18.07
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6FK2_A_SORA302_0
(GALECTIN-3)
5nfb GALECTIN-3
(Homo
sapiens)
4 / 4 ARG A 162
GLU A 165
GLU A 184
ARG A 186
8VT  A 301 (-2.7A)
8VT  A 301 (-3.5A)
8VT  A 301 (-2.7A)
8VT  A 301 (-3.4A)
0.07A 6fk2A-5nfbA:
29.8
6fk2A-5nfbA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6FK2_A_SORA302_0
(GALECTIN-3)
5nfb GALECTIN-3
(Homo
sapiens)
4 / 4 ARG A 186
GLU A 184
GLU A 165
ARG A 162
8VT  A 301 (-3.4A)
8VT  A 301 (-2.7A)
8VT  A 301 (-3.5A)
8VT  A 301 (-2.7A)
1.06A 6fk2A-5nfbA:
29.8
6fk2A-5nfbA:
100.00