SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5np4'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L78_A_ACTA1327_0
(PHOSPHORIBOSYLFORMYL
GLYCINAMIDINE
SYNTHASE)
5np4 TRANSCOBALAMIN-2
(Homo
sapiens)
4 / 4 VAL A 314
THR A 315
GLU A 400
GLU A 403
None
1.30A 4l78A-5np4A:
undetectable
4l78A-5np4A:
5.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EKZ_A_SNPA414_0
(AROMATIC
PEROXYGENASE)
5np4 TRANSCOBALAMIN-2
(Homo
sapiens)
4 / 5 PHE A 376
VAL A 337
PRO A 386
VAL A 407
CNC  A 502 ( 4.2A)
None
None
None
1.42A 6ekzA-5np4A:
undetectable
6ekzA-5np4A:
20.00