SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5nvd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KPB_A_SAMA1000_0
(UNCHARACTERIZED
PROTEIN MJ0100)
5nvd CBS-CP12
(Microcystis
aeruginosa)
6 / 12 ILE A  52
THR A  54
ASP A  57
LYS A  61
ILE A 103
PRO A 107
None
0.95A 3kpbA-5nvdA:
15.0
3kpbA-5nvdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KPB_A_SAMA1000_0
(UNCHARACTERIZED
PROTEIN MJ0100)
5nvd CBS-CP12
(Microcystis
aeruginosa)
5 / 12 ILE A 117
ASP A 122
LYS A 126
THR A  12
VAL A  15
None
0.85A 3kpbA-5nvdA:
15.0
3kpbA-5nvdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KPB_C_SAMC1000_0
(UNCHARACTERIZED
PROTEIN MJ0100)
5nvd CBS-CP12
(Microcystis
aeruginosa)
6 / 12 ILE A  52
THR A  54
ASP A  57
LYS A  61
ILE A 103
PRO A 107
None
0.93A 3kpbC-5nvdA:
14.7
3kpbC-5nvdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KPB_C_SAMC1000_0
(UNCHARACTERIZED
PROTEIN MJ0100)
5nvd CBS-CP12
(Microcystis
aeruginosa)
5 / 12 ILE A 117
ASP A 122
LYS A 126
THR A  12
VAL A  15
None
0.84A 3kpbC-5nvdA:
14.7
3kpbC-5nvdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KPB_D_SAMD1000_0
(UNCHARACTERIZED
PROTEIN MJ0100)
5nvd CBS-CP12
(Microcystis
aeruginosa)
5 / 10 ILE A  52
THR A  54
ASP A  57
LYS A  61
ILE A 103
None
0.83A 3kpbD-5nvdA:
14.6
3kpbD-5nvdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KPB_D_SAMD1000_0
(UNCHARACTERIZED
PROTEIN MJ0100)
5nvd CBS-CP12
(Microcystis
aeruginosa)
5 / 10 ILE A 117
ASP A 122
LYS A 126
THR A  12
VAL A  15
None
0.90A 3kpbD-5nvdA:
14.6
3kpbD-5nvdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KPD_B_SAMB1000_0
(UNCHARACTERIZED
PROTEIN MJ0100)
5nvd CBS-CP12
(Microcystis
aeruginosa)
5 / 12 ILE A  52
ASP A  57
LYS A  61
ILE A 103
PRO A 107
None
1.01A 3kpdB-5nvdA:
15.3
3kpdB-5nvdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KPD_B_SAMB1000_0
(UNCHARACTERIZED
PROTEIN MJ0100)
5nvd CBS-CP12
(Microcystis
aeruginosa)
5 / 12 ILE A  52
THR A  54
ASP A  57
LYS A  61
ILE A 103
None
0.62A 3kpdB-5nvdA:
15.3
3kpdB-5nvdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KPD_B_SAMB1000_0
(UNCHARACTERIZED
PROTEIN MJ0100)
5nvd CBS-CP12
(Microcystis
aeruginosa)
5 / 12 ILE A 117
ASP A 122
LYS A 126
THR A  12
VAL A  15
None
0.94A 3kpdB-5nvdA:
15.3
3kpdB-5nvdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KPD_C_SAMC1000_1
(UNCHARACTERIZED
PROTEIN MJ0100)
5nvd CBS-CP12
(Microcystis
aeruginosa)
5 / 12 ILE A  52
THR A  54
ASP A  57
ILE A 103
PRO A 107
None
0.69A 3kpdC-5nvdA:
16.0
3kpdC-5nvdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4OKW_A_198A1001_1
(ANDROGEN RECEPTOR)
5nvd CBS-CP12
(Microcystis
aeruginosa)
5 / 12 GLY A  51
VAL A  16
MET A  78
ILE A  77
VAL A  24
None
1.33A 4okwA-5nvdA:
undetectable
4okwA-5nvdA:
15.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ECO_A_LEUA602_0
(JASMONIC ACID-AMIDO
SYNTHETASE JAR1)
5nvd CBS-CP12
(Microcystis
aeruginosa)
4 / 6 THR A  54
THR A  56
VAL A  59
TYR A  60
None
0.74A 5ecoA-5nvdA:
undetectable
5ecoA-5nvdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JWA_H_ACTH614_0
(NADH DEHYDROGENASE,
PUTATIVE)
5nvd CBS-CP12
(Microcystis
aeruginosa)
4 / 6 ILE A  77
VAL A  41
TYR A  75
VAL A  74
None
0.82A 5jwaH-5nvdA:
undetectable
5jwaH-5nvdA:
undetectable