SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5ocd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C4D_A_DVAA8_0
(GRAMICIDIN A)		 5ocd -
(-) 		3 / 3 VAL A  63
TRP A 117
TRP A 187
 None
 1.13A 1c4dA-5ocdA:
undetectable
1c4dB-5ocdA:
undetectable		 1c4dA-5ocdA:
undetectable
1c4dB-5ocdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K13_C_THHC643_1
(5-METHYLTETRAHYDROFO
LATE-HOMOCYSTEINE
METHYLTRANSFERASE)		 5ocd -
(-) 		3 / 3 ASN A  98
ASP A  42
ARG A 154
 None
 0.93A 3k13C-5ocdA:
undetectable		 3k13C-5ocdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A81_A_DXCA1161_0
(MAJOR POLLEN
ALLERGEN BET V 1-A)		 5ocd -
(-) 		5 / 12 ILE A 111
ASP A 116
VAL A  67
ASP A  65
LEU A  30
 None
 1.05A 4a81A-5ocdA:
undetectable		 4a81A-5ocdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KSZ_A_CYSA620_0
(LACTOPEROXIDASE)		 5ocd -
(-) 		3 / 3 ARG A  21
GLU A  20
PHE A 194
 None
 0.90A 4kszA-5ocdA:
undetectable		 4kszA-5ocdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZJL_A_ERYA1101_1
(MULTIDRUG EFFLUX
PUMP SUBUNIT ACRB)		 5ocd -
(-) 		4 / 5 ASN A 147
SER A 199
ASP A  64
GLU A 180
 None
 1.23A 4zjlA-5ocdA:
0.0		 4zjlA-5ocdA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OY0_1_PQN1842_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1
PHOTOSYSTEM I
REACTION CENTER
SUBUNIT IX)		 5ocd -
(-) 		5 / 10 PHE A 228
ALA A 225
LEU A 226
ILE A 111
LEU A  95
 None
 1.10A 5oy01-5ocdA:
undetectable
5oy07-5ocdA:
undetectable		 5oy01-5ocdA:
undetectable
5oy07-5ocdA:
undetectable