SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5odj'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BSZ_E_RTLE177_0
(PLASMA
RETINOL-BINDING
PROTEIN)
5odj SINGLE-STRANDED
DNA-BINDING PROTEIN

(Enterobacter
phage
Enc34)
5 / 11 LEU A  51
ALA A 162
ALA A 111
VAL A 143
LEU A  33
None
1.29A 3bszE-5odjA:
undetectable
3bszE-5odjA:
17.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3V4T_A_ACTA502_0
(UDP-N-ACETYLGLUCOSAM
INE
1-CARBOXYVINYLTRANSF
ERASE)
5odj SINGLE-STRANDED
DNA-BINDING PROTEIN

(Enterobacter
phage
Enc34)
4 / 5 TYR A  30
SER A  29
GLY A 177
ARG A 180
CL  A 202 (-4.4A)
None
None
CL  A 202 (-4.1A)
1.29A 3v4tA-5odjA:
undetectable
3v4tD-5odjA:
undetectable
3v4tA-5odjA:
18.99
3v4tD-5odjA:
18.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X5I_A_FOLA201_1
(DIHYDROFOLATE
REDUCTASE)
5odj SINGLE-STRANDED
DNA-BINDING PROTEIN

(Enterobacter
phage
Enc34)
3 / 3 ASP A  96
ARG A 112
ARG A 159
None
0.86A 4x5iA-5odjA:
undetectable
4x5iA-5odjA:
22.49