SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5t3b'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DY4_A_SNPA437_1
(EXOGLUCANASE 1)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
5 / 12 ALA A 383
TYR A 341
GLU A 367
ARG A 108
ASP A 421
EDO  A 505 (-3.4A)
EDO  A 505 ( 3.7A)
EDO  A 505 ( 4.9A)
None
None
1.38A 1dy4A-5t3bA:
undetectable
1dy4A-5t3bA:
20.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1T9W_A_NFNA6002_1
(ACRIFLAVINE
RESISTANCE PROTEIN B)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
4 / 7 PHE A 263
ARG A 241
ASN A 322
GLU A 279
None
None
EDO  A 510 (-4.6A)
EDO  A 510 ( 4.0A)
1.28A 1t9wA-5t3bA:
undetectable
1t9wA-5t3bA:
18.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TT0_A_ACTA4901_0
(PYRANOSE OXIDASE)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
4 / 6 THR A 401
PHE A 368
PHE A 139
ASN A 447
None
1.25A 1tt0A-5t3bA:
undetectable
1tt0A-5t3bA:
22.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TT0_B_ACTB3901_0
(PYRANOSE OXIDASE)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
4 / 6 THR A 401
PHE A 368
PHE A 139
ASN A 447
None
1.24A 1tt0B-5t3bA:
undetectable
1tt0B-5t3bA:
22.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TT0_C_ACTC6901_0
(PYRANOSE OXIDASE)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
4 / 6 THR A 401
PHE A 368
PHE A 139
ASN A 447
None
1.24A 1tt0C-5t3bA:
0.7
1tt0C-5t3bA:
22.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TT0_D_ACTD5901_0
(PYRANOSE OXIDASE)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
4 / 6 THR A 401
PHE A 368
PHE A 139
ASN A 447
None
1.26A 1tt0D-5t3bA:
undetectable
1tt0D-5t3bA:
22.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HA4_A_ACHA546_0
(ACETYLCHOLINESTERASE)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
4 / 8 TYR A  57
TYR A 397
TYR A  99
GLY A 412
None
1.01A 2ha4A-5t3bA:
undetectable
2ha4A-5t3bA:
21.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HA4_B_ACHB603_0
(ACETYLCHOLINESTERASE)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
4 / 7 TYR A  57
TYR A 397
TYR A  99
GLY A 412
None
0.98A 2ha4B-5t3bA:
undetectable
2ha4B-5t3bA:
21.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HZN_D_ACTD229_0
(OXYGEN-INSENSITIVE
NAD(P)H
NITROREDUCTASE)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
4 / 4 ASP A 352
GLY A 349
LYS A 348
GLU A 347
None
1.48A 3hznD-5t3bA:
undetectable
3hznD-5t3bA:
18.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OSH_A_OINA5811_1
(PHOSPHOLIPASE A2
ISOFORM 3)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
5 / 9 LEU A 242
PHE A 284
ILE A 287
GLY A 195
LYS A 193
None
1.17A 3oshA-5t3bA:
undetectable
3oshA-5t3bA:
13.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3P6H_A_IBPA133_1
(FATTY ACID-BINDING
PROTEIN, ADIPOCYTE)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
4 / 7 PHE A 457
ILE A 446
VAL A 450
TYR A 100
None
1.11A 3p6hA-5t3bA:
undetectable
3p6hA-5t3bA:
17.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WRI_B_CAMB502_0
(CAMPHOR
5-MONOOXYGENASE)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
4 / 5 LEU A 404
GLY A 412
ILE A 336
VAL A 335
None
0.84A 3wriB-5t3bA:
undetectable
3wriB-5t3bA:
21.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WRK_A_CAMA502_0
(CAMPHOR
5-MONOOXYGENASE)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
4 / 5 LEU A 404
GLY A 412
ILE A 336
VAL A 335
None
0.76A 3wrkA-5t3bA:
undetectable
3wrkA-5t3bA:
21.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4HTF_A_ACTA303_0
(S-ADENOSYLMETHIONINE
-DEPENDENT
METHYLTRANSFERASE)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
3 / 3 TYR A 451
HIS A 140
ARG A 102
None
0.93A 4htfA-5t3bA:
undetectable
4htfA-5t3bA:
22.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4MWX_A_ZMRA513_2
(NEURAMINIDASE)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
3 / 3 ARG A  88
TRP A  90
ILE A 454
None
0.85A 4mwxA-5t3bA:
undetectable
4mwxA-5t3bA:
22.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4P65_G_IPHG101_0
(INSULIN)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
5 / 11 LEU A 192
VAL A 197
LEU A 174
CYH A 288
LEU A 242
None
1.06A 4p65B-5t3bA:
undetectable
4p65D-5t3bA:
undetectable
4p65G-5t3bA:
undetectable
4p65H-5t3bA:
undetectable
4p65B-5t3bA:
4.79
4p65D-5t3bA:
4.79
4p65G-5t3bA:
4.26
4p65H-5t3bA:
4.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RZV_A_032A801_2
(SERINE/THREONINE-PRO
TEIN KINASE B-RAF)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
4 / 5 ILE A 454
VAL A 450
PHE A 415
CYH A 410
None
1.35A 4rzvA-5t3bA:
undetectable
4rzvA-5t3bA:
20.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4WQ4_B_ACTB403_0
(TRNA N6-ADENOSINE
THREONYLCARBAMOYLTRA
NSFERASE)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
3 / 3 ARG A 245
ASP A 244
ARG A 241
None
0.62A 4wq4B-5t3bA:
undetectable
4wq4B-5t3bA:
19.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XMF_A_HSMA202_1
(NITROPHORIN-7)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
3 / 3 ASP A 254
LEU A 196
GLY A 195
None
0.49A 4xmfA-5t3bA:
undetectable
4xmfA-5t3bA:
18.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XP6_A_B40A601_1
(TRANSPORTER)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
4 / 5 VAL A 154
ASP A 151
PHE A 107
GLY A 146
None
1.25A 4xp6A-5t3bA:
undetectable
4xp6A-5t3bA:
20.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DBY_A_ACTA610_0
(SERUM ALBUMIN)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
3 / 3 TYR A 369
LYS A 417
LYS A 426
EDO  A 505 (-4.6A)
None
EDO  A 505 ( 4.1A)
1.31A 5dbyA-5t3bA:
undetectable
5dbyA-5t3bA:
21.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6I0Y_A_TRPA3001_0
(23S RIBOSOMAL RNA
TRYPTOPHANASE OPERON
LEADER PEPTIDE)
5t3b GLYCOSIDE HYDROLASE
(Bacteroides
plebeius)
3 / 3 TRP A 448
ILE A 446
ASP A 445
None
0.55A 6i0y7-5t3bA:
undetectable
6i0y7-5t3bA:
3.33