SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5t3s'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y03_A_5FWA601_1
(BETA-1 ADRENERGIC
RECEPTOR)
5t3s FAB 35022 HEAVY
CHAIN

(Homo
sapiens)
5 / 12 VAL D 163
VAL D 182
SER D 180
ASN D 197
ASN D 155
None
1.45A 2y03A-5t3sD:
undetectable
2y03A-5t3sD:
20.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NYA_A_JTZA1203_1
(BETA-2 ADRENERGIC
RECEPTOR, LYSOZYME)
5t3s FAB 35022 HEAVY
CHAIN

(Homo
sapiens)
5 / 12 VAL D 163
VAL D 182
SER D 180
ASN D 197
ASN D 155
None
1.40A 3nyaA-5t3sD:
undetectable
3nyaA-5t3sD:
18.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LB0_A_ACTA401_0
(UNCHARACTERIZED
PROTEIN)
5t3s FAB 35022 HEAVY
CHAIN

(Homo
sapiens)
5 / 9 SER D 130
GLY D 133
SER D 132
GLY D 134
THR D 135
None
1.42A 4lb0A-5t3sD:
undetectable
4lb0A-5t3sD:
22.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UMW_B_RBFB201_1
(GLYOXALASE/BLEOMYCIN
RESISANCE
PROTEIN/DIOXYGENASE)
5t3s FAB 35022 HEAVY
CHAIN

(Homo
sapiens)
4 / 7 VAL D  18
ARG D  38
TYR D  90
LEU D  59
None
0.92A 5umwB-5t3sD:
undetectable
5umwE-5t3sD:
undetectable
5umwB-5t3sD:
15.16
5umwE-5t3sD:
15.16