SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5ubg'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4KR3_A_GLYA701_0 (GLYCINE--TRNA LIGASE)	5ubg	ATP PHOSPHORIBOSYLTRANSF ERASE (Campylobacter jejuni)	4 / 6	GLU A 23 ARG A 224 GLU A 27 SER A 26	None	1.47A	4kr3A-5ubgA: undetectable	4kr3A-5ubgA: undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5FEP_A_SAMA407_0 ([FEFE] HYDROGENASE MATURASE SUBUNIT HYDE)	5ubg	ATP PHOSPHORIBOSYLTRANSF ERASE (Campylobacter jejuni)	5 / 12	GLN A 85 GLY A 88 LEU A 87 ILE A 196 TYR A 93	None	1.41A	5fepA-5ubgA: undetectable	5fepA-5ubgA: undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5FES_A_SAMA408_0 ([FEFE] HYDROGENASE MATURASE SUBUNIT HYDE)	5ubg	ATP PHOSPHORIBOSYLTRANSF ERASE (Campylobacter jejuni)	5 / 12	GLN A 85 GLY A 88 LEU A 87 ILE A 196 TYR A 93	None	1.41A	5fesA-5ubgA: undetectable	5fesA-5ubgA: undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	6F88_B_STRB502_1 (CYTOCHROME P450 CYP260A1)	5ubg	ATP PHOSPHORIBOSYLTRANSF ERASE (Campylobacter jejuni)	4 / 6	LEU A 170 LEU A 134 SER A 191 ASN A 80	PRT A 302 (-4.2A) None PRT A 302 ( 4.2A) None	0.81A	6f88B-5ubgA: undetectable	6f88B-5ubgA: 17.02

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["4KR3_A_GLYA701_0","GLYCINE--TRNA LIGASE","5ubg","ATP PHOSPHORIBOSYLTRANSFERASE","Campylobacter jejuni",4,"GLU A  23;ARG A 224;GLU A  27;SER A  26","None","1.47A","4kr3A-5ubgA:undetectable","4kr3A-5ubgA:undetectable"],["5FEP_A_SAMA407_0","[FEFE] HYDROGENASE MATURASE SUBUNIT HYDE","5ubg","ATP PHOSPHORIBOSYLTRANSFERASE","Campylobacter jejuni",5,"GLN A  85;GLY A  88;LEU A  87;ILE A 196;TYR A  93","None","1.41A","5fepA-5ubgA:undetectable","5fepA-5ubgA:undetectable"],["5FES_A_SAMA408_0","[FEFE] HYDROGENASE MATURASE SUBUNIT HYDE","5ubg","ATP PHOSPHORIBOSYLTRANSFERASE","Campylobacter jejuni",5,"GLN A  85;GLY A  88;LEU A  87;ILE A 196;TYR A  93","None","1.41A","5fesA-5ubgA:undetectable","5fesA-5ubgA:undetectable"],["6F88_B_STRB502_1","CYTOCHROME P450 CYP260A1","5ubg","ATP PHOSPHORIBOSYLTRANSFERASE","Campylobacter jejuni",4,"LEU A 170;LEU A 134;SER A 191;ASN A  80","PRT A 302 (-4.2A);None;PRT A 302 ( 4.2A);None","0.81A","6f88B-5ubgA:undetectable","6f88B-5ubgA:17.02"]]