SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5ucd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DF7_A_MTXA501_1
(DIHYDROFOLATE
REDUCTASE)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		6 / 12 ALA A 251
GLN A 247
LEU A 319
VAL A 292
LEU A 295
ILE A 342
 None
 1.30A 1df7A-5ucdA:
undetectable		 1df7A-5ucdA:
17.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RMT_C_ADNC1503_1
(CLASS B ACID
PHOSPHATASE)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		4 / 8 PHE A 119
LEU A  57
GLY A 246
TYR A 121
 NAP  A 501 (-4.5A)
None
None
ZBZ  A 249 ( 4.0A)
 0.84A 1rmtC-5ucdA:
3.9		 1rmtC-5ucdA:
19.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1VPT_A_SAMA400_0
(VP39)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		5 / 12 ILE A 381
GLY A 380
VAL A 370
VAL A 377
LEU A 225
 None
 0.98A 1vptA-5ucdA:
undetectable		 1vptA-5ucdA:
20.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Z2B_C_VLBC800_2
(TUBULIN ALPHA CHAIN)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		4 / 5 VAL A 358
ASN A 359
VAL A 368
ILE A 223
 None
 0.80A 1z2bC-5ucdA:
undetectable		 1z2bC-5ucdA:
20.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DPZ_A_TYLA2001_1
(PHOSPHOLIPASE A2
VRV-PL-VIIIA)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		4 / 6 LEU A 125
ALA A  67
HIS A 418
TYR A 417
 ZBZ  A 249 ( 4.6A)
None
None
None
 1.15A 2dpzA-5ucdA:
undetectable		 2dpzA-5ucdA:
14.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3A50_A_VD3A2001_1
(VITAMIN D
HYDROXYLASE)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		5 / 12 ILE A 134
ASN A  45
LEU A  35
ILE A  76
ALA A  79
 None
 1.18A 3a50A-5ucdA:
undetectable		 3a50A-5ucdA:
20.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BRF_A_SORA2_0
(LIN-12 AND GLP-1
PHENOTYPE PROTEIN 1,
ISOFORM A)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		3 / 3 LYS A  46
LYS A  39
VAL A  42
 None
 1.08A 3brfA-5ucdA:
undetectable		 3brfA-5ucdA:
21.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3H5G_B_LEIB16_0
(COIL SER L16D-PEN)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		4 / 5 LEU A  80
GLN A  33
LEU A  35
GLU A  36
 None
 1.04A 3h5gA-5ucdA:
undetectable
3h5gB-5ucdA:
undetectable		 3h5gA-5ucdA:
5.22
3h5gB-5ucdA:
5.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HCR_A_CHDA424_0
(FERROCHELATASE,
MITOCHONDRIAL)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		4 / 8 ARG A 294
PRO A 344
GLY A 340
PRO A 341
 None
 0.86A 3hcrA-5ucdA:
2.2		 3hcrA-5ucdA:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HRD_B_NIOB5661_1
(NICOTINATE
DEHYDROGENASE LARGE
MOLYBDOPTERIN
SUBUNIT
NICOTINATE
DEHYDROGENASE MEDIUM
MOLYBDOPTERIN
SUBUNIT)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		4 / 8 ILE A 250
ALA A 399
PHE A 400
ALA A  71
 ZBZ  A 249 ( 4.0A)
ZBZ  A 249 ( 4.3A)
None
None
 0.86A 3hrdA-5ucdA:
undetectable
3hrdB-5ucdA:
undetectable		 3hrdA-5ucdA:
23.48
3hrdB-5ucdA:
21.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3QL6_A_NIMA614_1
(LACTOPEROXIDASE)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		4 / 7 GLU A  75
GLU A 215
PHE A 190
PRO A 129
 None
NAP  A 501 (-4.0A)
None
None
 1.42A 3ql6A-5ucdA:
undetectable		 3ql6A-5ucdA:
20.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TBG_A_RTZA2_1
(CYTOCHROME P450 2D6)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		5 / 11 LEU A 265
VAL A 257
LEU A 343
VAL A 324
PHE A 242
 None
 1.10A 3tbgA-5ucdA:
1.4		 3tbgA-5ucdA:
21.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TBG_C_RTZC2_1
(CYTOCHROME P450 2D6)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		5 / 10 LEU A 265
VAL A 257
LEU A 343
VAL A 324
PHE A 242
 None
 1.07A 3tbgC-5ucdA:
1.4		 3tbgC-5ucdA:
21.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4F93_B_SANB3004_1
(U5 SMALL NUCLEAR
RIBONUCLEOPROTEIN
200 KDA HELICASE)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		4 / 8 GLU A 300
GLN A 311
GLY A 309
SER A 320
 None
 0.98A 4f93B-5ucdA:
undetectable		 4f93B-5ucdA:
12.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4H2F_A_ADNA601_1
(5'-NUCLEOTIDASE)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		5 / 9 ASN A 138
GLY A 136
GLY A 137
ARG A  31
PHE A  20
 None
 1.41A 4h2fA-5ucdA:
undetectable		 4h2fA-5ucdA:
24.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4H2G_A_ADNA603_1
(5'-NUCLEOTIDASE)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		5 / 9 ASN A 138
GLY A 136
GLY A 137
ARG A  31
PHE A  20
 None
 1.40A 4h2gA-5ucdA:
2.3		 4h2gA-5ucdA:
24.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4O7G_B_ASCB304_0
(PROBABLE
TRANSMEMBRANE
ASCORBATE
FERRIREDUCTASE 2)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		4 / 6 PHE A 406
HIS A 398
ILE A 250
TYR A 369
 NAP  A 501 (-4.6A)
None
ZBZ  A 249 ( 4.0A)
None
 1.39A 4o7gB-5ucdA:
undetectable		 4o7gB-5ucdA:
20.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QZU_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 2)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		5 / 12 ALA A 153
THR A 128
THR A 126
VAL A  72
LEU A  49
 None
 1.37A 4qzuA-5ucdA:
undetectable		 4qzuA-5ucdA:
16.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RP8_C_ASCC501_1
(ASCORBATE-SPECIFIC
PERMEASE IIC
COMPONENT ULAA)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		3 / 3 SER A  34
TYR A 167
ASP A  27
 None
 0.65A 4rp8C-5ucdA:
undetectable		 4rp8C-5ucdA:
20.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5N0T_B_SAMB501_0
(PEPTIDE
N-METHYLTRANSFERASE)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		5 / 12 ILE A 135
GLY A 136
PHE A 190
ILE A  76
ALA A  79
 None
 1.05A 5n0tB-5ucdA:
1.6		 5n0tB-5ucdA:
23.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5N0X_A_SAMA501_0
(PEPTIDE
N-METHYLTRANSFERASE)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		5 / 12 ILE A 135
GLY A 136
PHE A 190
ILE A  76
ALA A  79
 None
 1.00A 5n0xA-5ucdA:
1.3		 5n0xA-5ucdA:
23.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EBP_A_DAHA123_0
(RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE,
BETA SUBUNIT)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		5 / 9 LEU A 127
THR A 128
GLY A 132
ILE A 134
ILE A 142
 None
 1.05A 6ebpA-5ucdA:
undetectable		 6ebpA-5ucdA:
11.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EBP_B_DAHB123_0
(RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE,
BETA SUBUNIT)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		5 / 10 LEU A 127
THR A 128
GLY A 132
ILE A 134
ILE A 142
 None
 1.03A 6ebpB-5ucdA:
undetectable		 6ebpB-5ucdA:
11.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EBP_C_DAHC123_0
(RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE,
BETA SUBUNIT)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		5 / 10 LEU A 127
THR A 128
GLY A 132
ILE A 134
ILE A 142
 None
 0.99A 6ebpC-5ucdA:
undetectable		 6ebpC-5ucdA:
11.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EBP_D_DAHD123_0
(RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE,
BETA SUBUNIT)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		6 / 10 LEU A 127
THR A 128
GLY A 132
ILE A 134
ILE A 159
ILE A 142
 None
 1.11A 6ebpD-5ucdA:
undetectable		 6ebpD-5ucdA:
11.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EBZ_A_DAHA123_0
(RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE,
BETA SUBUNIT)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		6 / 11 LEU A 127
THR A 128
GLY A 132
ILE A 134
ILE A 159
ILE A 142
 None
 1.15A 6ebzA-5ucdA:
undetectable		 6ebzA-5ucdA:
11.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EBZ_B_DAHB123_0
(RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE,
BETA SUBUNIT)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		6 / 11 LEU A 127
THR A 128
GLY A 132
ILE A 134
ILE A 159
ILE A 142
 None
 1.13A 6ebzB-5ucdA:
undetectable		 6ebzB-5ucdA:
11.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EBZ_C_DAHC123_0
(RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE,
BETA SUBUNIT)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		6 / 11 LEU A 127
THR A 128
GLY A 132
ILE A 134
ILE A 159
ILE A 142
 None
 1.12A 6ebzC-5ucdA:
undetectable		 6ebzC-5ucdA:
11.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EBZ_D_DAHD123_0
(RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE,
BETA SUBUNIT)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		6 / 11 LEU A 127
THR A 128
GLY A 132
ILE A 134
ILE A 159
ILE A 142
 None
 1.16A 6ebzD-5ucdA:
undetectable		 6ebzD-5ucdA:
11.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6GP2_A_DAHA126_0
(RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE
BETA CHAIN)		 5ucd NAD(P)-DEPENDENT
BENZALDEHYDE
DEHYDROGENASE
(Pseudomonas
putida) 		5 / 11 LEU A 127
GLY A 132
ILE A 134
ILE A 159
ILE A 142
 None
 0.92A 6gp2A-5ucdA:
undetectable		 6gp2A-5ucdA:
10.71