SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5vn8'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1FKO_A_EFZA999_1
(HIV-1 RT, A-CHAIN)		 5vn8 B12 FAB HEAVY CHAIN
(Homo
sapiens) 		5 / 10 VAL H  95
TYR H 100
TYR H 100
GLY H  96
TYR H  98
 None
 1.40A 1fkoA-5vn8H:
undetectable		 1fkoA-5vn8H:
16.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BRF_A_SORA2_0
(LIN-12 AND GLP-1
PHENOTYPE PROTEIN 1,
ISOFORM A)		 5vn8 B12 FAB HEAVY CHAIN
(Homo
sapiens) 		3 / 3 LYS H  12
LYS H  19
VAL H  18
 None
 0.97A 3brfA-5vn8H:
2.2		 3brfA-5vn8H:
18.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SUG_A_SUEA1201_1
(NS3 PROTEASE, NS4A
PROTEIN)		 5vn8 B12 FAB HEAVY CHAIN
(Homo
sapiens) 		5 / 12 ALA H  24
PHE H  29
THR H  77
ALA H  78
ASP H  72
 None
 1.08A 3sugA-5vn8H:
undetectable		 3sugA-5vn8H:
22.83