SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5vyf'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5HW4_A_SAMA801_0 (RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE I)	5vyf	CHIMERA OF MAJOR ALLERGEN I POLYPEPTIDE CHAIN 2,MAJOR ALLERGEN I POLYPEPTIDE CHAIN 1 (Felis catus)	5 / 12	ASP F 138 ALA F 130 TYR F 113 LEU F 127 VAL F 117	None	1.22A	5hw4A-5vyfF: undetectable	5hw4A-5vyfF: undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5HW4_B_SAMB801_0 (RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE I)	5vyf	CHIMERA OF MAJOR ALLERGEN I POLYPEPTIDE CHAIN 2,MAJOR ALLERGEN I POLYPEPTIDE CHAIN 1 (Felis catus)	5 / 11	ASP F 138 ALA F 130 TYR F 113 LEU F 127 VAL F 117	None	1.24A	5hw4B-5vyfF: undetectable	5hw4B-5vyfF: undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5HW4_C_SAMC801_0 (RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE I)	5vyf	CHIMERA OF MAJOR ALLERGEN I POLYPEPTIDE CHAIN 2,MAJOR ALLERGEN I POLYPEPTIDE CHAIN 1 (Felis catus)	5 / 12	ASP F 138 ALA F 130 TYR F 113 LEU F 127 VAL F 117	None	1.20A	5hw4C-5vyfF: undetectable	5hw4C-5vyfF: undetectable

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["5HW4_A_SAMA801_0","RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE I","5vyf","CHIMERA OF MAJOR ALLERGEN I POLYPEPTIDE CHAIN 2,MAJOR ALLERGEN I POLYPEPTIDE CHAIN 1","Felis catus",5,"ASP F 138;ALA F 130;TYR F 113;LEU F 127;VAL F 117","None","1.22A","5hw4A-5vyfF:undetectable","5hw4A-5vyfF:undetectable"],["5HW4_B_SAMB801_0","RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE I","5vyf","CHIMERA OF MAJOR ALLERGEN I POLYPEPTIDE CHAIN 2,MAJOR ALLERGEN I POLYPEPTIDE CHAIN 1","Felis catus",5,"ASP F 138;ALA F 130;TYR F 113;LEU F 127;VAL F 117","None","1.24A","5hw4B-5vyfF:undetectable","5hw4B-5vyfF:undetectable"],["5HW4_C_SAMC801_0","RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE I","5vyf","CHIMERA OF MAJOR ALLERGEN I POLYPEPTIDE CHAIN 2,MAJOR ALLERGEN I POLYPEPTIDE CHAIN 1","Felis catus",5,"ASP F 138;ALA F 130;TYR F 113;LEU F 127;VAL F 117","None","1.20A","5hw4C-5vyfF:undetectable","5hw4C-5vyfF:undetectable"]]