SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5waq'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3B6H_A_MXDA551_1
(PROSTACYCLIN
SYNTHASE)		 5waq OUTER MEMBRANE
PROTEIN ASSEMBLY
FACTOR BAMD
(Neisseria
gonorrhoeae) 		4 / 6 TYR A 110
ALA A 111
LEU A 114
ALA A  79
 None
 0.73A 3b6hA-5waqA:
undetectable		 3b6hA-5waqA:
12.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3B6H_B_MXDB551_1
(PROSTACYCLIN
SYNTHASE)		 5waq OUTER MEMBRANE
PROTEIN ASSEMBLY
FACTOR BAMD
(Neisseria
gonorrhoeae) 		4 / 6 TYR A 110
ALA A 111
LEU A 114
ALA A  79
 None
 0.78A 3b6hB-5waqA:
undetectable		 3b6hB-5waqA:
12.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3V4T_H_ACTH502_0
(UDP-N-ACETYLGLUCOSAM
INE
1-CARBOXYVINYLTRANSF
ERASE)		 5waq OUTER MEMBRANE
PROTEIN ASSEMBLY
FACTOR BAMD
(Neisseria
gonorrhoeae) 		3 / 3 SER A 207
GLY A 206
GLN A 209
 None
 0.65A 3v4tH-5waqA:
undetectable		 3v4tH-5waqA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YV5_B_SVRB207_1
(BASIC PHOSPHOLIPASE
A2 HOMOLOG 2)		 5waq OUTER MEMBRANE
PROTEIN ASSEMBLY
FACTOR BAMD
(Neisseria
gonorrhoeae) 		4 / 6 LEU A 177
ASN A 143
PRO A 140
ARG A 186
 None
 1.41A 4yv5A-5waqA:
undetectable		 4yv5A-5waqA:
20.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5TJY_A_BEZA304_0
(4-HYDROXY-TETRAHYDRO
DIPICOLINATE
REDUCTASE)		 5waq OUTER MEMBRANE
PROTEIN ASSEMBLY
FACTOR BAMD
(Neisseria
gonorrhoeae) 		3 / 3 MET A 108
GLU A  96
ARG A  99
 None
 0.92A 5tjyA-5waqA:
undetectable		 5tjyA-5waqA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5TJZ_A_BEZA302_0
(4-HYDROXY-TETRAHYDRO
DIPICOLINATE
REDUCTASE)		 5waq OUTER MEMBRANE
PROTEIN ASSEMBLY
FACTOR BAMD
(Neisseria
gonorrhoeae) 		3 / 3 MET A 108
GLU A  96
ARG A  99
 None
 0.91A 5tjzA-5waqA:
undetectable		 5tjzA-5waqA:
undetectable