SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5wii'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YY8_B_SAMB500_0
(UPF0106 PROTEIN
PH0461)
5wii CONJUGAL TRANSFER
PROTEIN

(Escherichia
coli)
5 / 11 VAL A 107
VAL A 125
ILE A 198
GLU A 111
ALA A 197
None
1.05A 2yy8A-5wiiA:
undetectable
2yy8B-5wiiA:
undetectable
2yy8A-5wiiA:
22.50
2yy8B-5wiiA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3QXY_B_SAMB6735_0
(N-LYSINE
METHYLTRANSFERASE
SETD6
TRANSCRIPTION FACTOR
P65)
5wii CONJUGAL TRANSFER
PROTEIN

(Escherichia
coli)
5 / 11 VAL A 159
TYR A 113
TYR A 137
TYR A 225
TYR A 106
None
1.23A 3qxyB-5wiiA:
undetectable
3qxyQ-5wiiA:
undetectable
3qxyB-5wiiA:
14.80
3qxyQ-5wiiA:
8.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OTR_A_ACTA402_0
(CASEIN KINASE II
SUBUNIT ALPHA)
5wii CONJUGAL TRANSFER
PROTEIN

(Escherichia
coli)
4 / 5 TYR A 106
VAL A 125
ASP A 121
ALA A 124
None
1.12A 5otrA-5wiiA:
undetectable
5otrA-5wiiA:
18.88