SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5wo6'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1G50_A_ESTA600_1
(ESTROGEN RECEPTOR)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
5 / 11 LEU A  50
LEU A  51
ALA A  52
LEU A  64
LEU A  98
LEU  A  50 ( 0.6A)
LEU  A  51 ( 0.6A)
ALA  A  52 ( 0.0A)
LEU  A  64 ( 0.6A)
LEU  A  98 ( 0.6A)
1.28A 1g50A-5wo6A:
undetectable
1g50A-5wo6A:
16.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GWR_A_ESTA600_1
(OESTROGEN RECEPTOR)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
5 / 10 LEU A  50
LEU A  51
ALA A  52
LEU A  64
LEU A  98
LEU  A  50 ( 0.6A)
LEU  A  51 ( 0.6A)
ALA  A  52 ( 0.0A)
LEU  A  64 ( 0.6A)
LEU  A  98 ( 0.6A)
1.28A 1gwrA-5wo6A:
undetectable
1gwrA-5wo6A:
16.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MXF_A_MTXA1278_1
(PTERIDINE REDUCTASE
2)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
5 / 10 TYR A 154
LEU A 205
TYR A 161
LEU A 240
THR A 298
TYR  A 154 ( 1.3A)
LEU  A 205 ( 0.6A)
TYR  A 161 ( 1.3A)
LEU  A 240 ( 0.6A)
THR  A 298 ( 0.8A)
1.13A 1mxfA-5wo6A:
undetectable
1mxfA-5wo6A:
19.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MXF_B_MTXB2278_1
(PTERIDINE REDUCTASE
2)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
5 / 11 TYR A 154
LEU A 205
TYR A 161
LEU A 240
THR A 298
TYR  A 154 ( 1.3A)
LEU  A 205 ( 0.6A)
TYR  A 161 ( 1.3A)
LEU  A 240 ( 0.6A)
THR  A 298 ( 0.8A)
1.13A 1mxfB-5wo6A:
undetectable
1mxfB-5wo6A:
19.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MXF_C_MTXC3278_1
(PTERIDINE REDUCTASE
2)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
5 / 11 TYR A 154
LEU A 205
TYR A 161
LEU A 240
THR A 298
TYR  A 154 ( 1.3A)
LEU  A 205 ( 0.6A)
TYR  A 161 ( 1.3A)
LEU  A 240 ( 0.6A)
THR  A 298 ( 0.8A)
1.17A 1mxfC-5wo6A:
undetectable
1mxfC-5wo6A:
19.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MXF_D_MTXD4278_1
(PTERIDINE REDUCTASE
2)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
5 / 11 TYR A 154
LEU A 205
TYR A 161
LEU A 240
THR A 298
TYR  A 154 ( 1.3A)
LEU  A 205 ( 0.6A)
TYR  A 161 ( 1.3A)
LEU  A 240 ( 0.6A)
THR  A 298 ( 0.8A)
1.18A 1mxfD-5wo6A:
undetectable
1mxfD-5wo6A:
19.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2W3B_B_FOLB401_1
(DIHYDROFOLATE
REDUCTASE)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
3 / 3 GLU A 249
GLN A 305
ARG A 304
GLU  A 249 ( 0.6A)
GLN  A 305 ( 0.6A)
ARG  A 304 ( 0.6A)
0.79A 2w3bB-5wo6A:
undetectable
2w3bB-5wo6A:
13.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ERD_A_DESA600_1
(ESTROGEN RECEPTOR
ALPHA)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
5 / 12 LEU A  50
ALA A  52
LEU A  65
LEU A  64
LEU A  98
LEU  A  50 ( 0.6A)
ALA  A  52 ( 0.0A)
LEU  A  65 ( 0.5A)
LEU  A  64 ( 0.6A)
LEU  A  98 ( 0.6A)
1.10A 3erdA-5wo6A:
2.1
3erdA-5wo6A:
18.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HM1_A_J3ZA2_1
(ESTROGEN RECEPTOR)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
5 / 12 LEU A  50
ALA A  52
LEU A  65
LEU A  64
LEU A  98
LEU  A  50 ( 0.6A)
ALA  A  52 ( 0.0A)
LEU  A  65 ( 0.5A)
LEU  A  64 ( 0.6A)
LEU  A  98 ( 0.6A)
1.10A 3hm1A-5wo6A:
undetectable
3hm1A-5wo6A:
18.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IA4_C_MTXC164_2
(DIHYDROFOLATE
REDUCTASE)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
4 / 4 ILE A 295
ARG A 262
ILE A 306
THR A 297
ILE  A 295 ( 0.7A)
ARG  A 262 ( 0.6A)
ILE  A 306 ( 0.7A)
THR  A 297 ( 0.8A)
1.16A 3ia4C-5wo6A:
undetectable
3ia4C-5wo6A:
13.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KPD_B_SAMB1000_1
(UNCHARACTERIZED
PROTEIN MJ0100)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
3 / 3 ASN A  57
ASN A  91
GLU A  93
ASN  A  57 ( 0.6A)
ASN  A  91 ( 0.6A)
GLU  A  93 ( 0.6A)
0.88A 3kpdC-5wo6A:
undetectable
3kpdC-5wo6A:
9.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MNO_A_DEXA784_1
(GLUCOCORTICOID
RECEPTOR)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
5 / 12 GLY A 448
VAL A 437
MET A 434
ILE A 556
PHE A 552
GLY  A 448 ( 0.0A)
VAL  A 437 ( 0.6A)
MET  A 434 ( 0.0A)
ILE  A 556 ( 0.7A)
PHE  A 552 ( 1.3A)
1.41A 3mnoA-5wo6A:
undetectable
3mnoA-5wo6A:
15.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4F4D_B_CHDB504_0
(FERROCHELATASE,
MITOCHONDRIAL)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
4 / 4 LEU A 167
PRO A 166
LEU A 182
ILE A 183
LEU  A 167 ( 0.6A)
PRO  A 166 ( 1.1A)
LEU  A 182 ( 0.6A)
ILE  A 183 ( 0.7A)
0.98A 4f4dB-5wo6A:
undetectable
4f4dB-5wo6A:
19.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X20_B_LOCB502_1
(TUBULIN BETA CHAIN)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
5 / 12 LEU A 136
ALA A 135
ASN A  92
ALA A  86
ALA A 120
LEU  A 136 ( 0.6A)
ALA  A 135 ( 0.0A)
ASN  A  92 ( 0.6A)
ALA  A  86 ( 0.0A)
ALA  A 120 ( 0.0A)
1.00A 4x20B-5wo6A:
undetectable
4x20B-5wo6A:
20.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X20_B_LOCB502_1
(TUBULIN BETA CHAIN)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
5 / 12 LEU A 137
LEU A 132
ALA A 120
VAL A 106
ALA A 141
LEU  A 137 ( 0.6A)
LEU  A 132 ( 0.6A)
ALA  A 120 ( 0.0A)
VAL  A 106 ( 0.6A)
ALA  A 141 ( 0.0A)
0.99A 4x20B-5wo6A:
undetectable
4x20B-5wo6A:
20.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZN7_B_DESB600_1
(ESTROGEN RECEPTOR)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
5 / 11 LEU A  50
ALA A  52
LEU A  65
LEU A  64
LEU A  98
LEU  A  50 ( 0.6A)
ALA  A  52 ( 0.0A)
LEU  A  65 ( 0.5A)
LEU  A  64 ( 0.6A)
LEU  A  98 ( 0.6A)
1.14A 4zn7B-5wo6A:
undetectable
4zn7B-5wo6A:
16.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5U4S_B_BEZB301_0
(PUTATIVE SHORT CHAIN
DEHYDROGENASE)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
4 / 8 ILE A 189
LEU A 219
MET A 215
LEU A 218
ILE  A 189 ( 0.7A)
LEU  A 219 ( 0.6A)
MET  A 215 ( 0.0A)
LEU  A 218 ( 0.6A)
1.02A 5u4sB-5wo6A:
undetectable
5u4sB-5wo6A:
15.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VCG_A_08YA602_2
(CYTOCHROME P450 3A4)
5wo6 TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Rattus
norvegicus)
3 / 3 ARG A 588
ARG A 491
ARG A 593
ARG  A 588 ( 0.6A)
ARG  A 491 ( 0.6A)
ARG  A 593 ( 0.6A)
0.82A 5vcgA-5wo6A:
undetectable
5vcgA-5wo6A:
20.94