SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5xdm'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LBD_A_9CRA424_1
(RETINOIC ACID
RECEPTOR GAMMA)		 5xdm SEPTUM
SITE-DETERMINING
PROTEIN MINC
(Escherichia
coli) 		5 / 12 ALA A  70
SER A  73
GLY A  66
ALA A  87
ILE A  80
 None
 1.23A 3lbdA-5xdmA:
undetectable		 3lbdA-5xdmA:
15.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5C0O_H_SAMH301_0
(TRNA
(ADENINE(58)-N(1))-M
ETHYLTRANSFERASE
TRMI)		 5xdm SEPTUM
SITE-DETERMINING
PROTEIN MINC
(Escherichia
coli) 		5 / 12 ALA A  48
GLY A  49
SER A  29
GLY A  30
LEU A  89
 None
 1.07A 5c0oH-5xdmA:
undetectable		 5c0oH-5xdmA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DWD_D_GLYD713_0
(DEOXYNUCLEOSIDE
TRIPHOSPHATE
TRIPHOSPHOHYDROLASE
SAMHD1)		 5xdm SEPTUM
SITE-DETERMINING
PROTEIN MINC
(Escherichia
coli) 		3 / 3 ARG A  28
HIS A  45
ARG A  65
 None
 0.98A 6dwdD-5xdmA:
undetectable		 6dwdD-5xdmA:
undetectable