SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5xgu'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TUF_B_AZ1B503_1
(DIAMINOPIMELATE
DECARBOXYLASE)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 6 GLU B 522
SER B 223
ARG B 494
TYR B 516
None
1.44A 1tufA-5xguB:
undetectable
1tufB-5xguB:
undetectable
1tufA-5xguB:
20.15
1tufB-5xguB:
20.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1V54_C_CHDC3271_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE III
CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 8 LEU B 449
GLN B 450
PHE B 411
LEU B 415
None
0.78A 1v54C-5xguB:
undetectable
1v54J-5xguB:
undetectable
1v54C-5xguB:
15.24
1v54J-5xguB:
6.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1V54_P_CHDP4271_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE III
CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 8 LEU B 449
GLN B 450
PHE B 411
LEU B 415
None
0.84A 1v54P-5xguB:
undetectable
1v54W-5xguB:
undetectable
1v54P-5xguB:
15.24
1v54W-5xguB:
6.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ZZU_B_ACTB861_0
(NITRIC-OXIDE
SYNTHASE, BRAIN)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 5 GLY B 135
TRP B 547
VAL B 544
SER B 241
None
1.22A 1zzuB-5xguB:
undetectable
1zzuB-5xguB:
20.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DDW_A_PXLA1003_1
(PYRIDOXINE KINASE)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 8 VAL B 544
VAL B 138
LEU B 548
ASP B 139
None
0.91A 2ddwA-5xguB:
undetectable
2ddwA-5xguB:
18.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DYR_C_CHDC271_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART
CYTOCHROME C OXIDASE
SUBUNIT 3)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 8 LEU B 449
GLN B 450
PHE B 411
LEU B 415
None
0.80A 2dyrC-5xguB:
undetectable
2dyrJ-5xguB:
undetectable
2dyrC-5xguB:
15.24
2dyrJ-5xguB:
6.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DYR_P_CHDP1271_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART
CYTOCHROME C OXIDASE
SUBUNIT 3)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 8 LEU B 449
GLN B 450
PHE B 411
LEU B 415
None
0.81A 2dyrP-5xguB:
undetectable
2dyrW-5xguB:
undetectable
2dyrP-5xguB:
15.24
2dyrW-5xguB:
6.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EIK_C_CHDC271_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART
CYTOCHROME C OXIDASE
SUBUNIT 3)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 7 LEU B 449
GLN B 450
PHE B 411
LEU B 415
None
0.87A 2eikC-5xguB:
undetectable
2eikJ-5xguB:
undetectable
2eikC-5xguB:
15.24
2eikJ-5xguB:
6.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EIK_P_CHDP1271_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART
CYTOCHROME C OXIDASE
SUBUNIT 3)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 8 LEU B 449
GLN B 450
PHE B 411
LEU B 415
None
0.78A 2eikP-5xguB:
undetectable
2eikW-5xguB:
undetectable
2eikP-5xguB:
15.24
2eikW-5xguB:
6.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EIL_C_CHDC271_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART
CYTOCHROME C OXIDASE
SUBUNIT 3)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 8 LEU B 449
GLN B 450
PHE B 411
LEU B 415
None
0.86A 2eilC-5xguB:
undetectable
2eilJ-5xguB:
undetectable
2eilC-5xguB:
15.24
2eilJ-5xguB:
6.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2F78_A_BEZA1001_0
(HTH-TYPE
TRANSCRIPTIONAL
REGULATOR BENM)
5xgu RIBONUCLEASE R
(Escherichia
coli)
5 / 9 LEU B 321
LEU B 317
LEU B 310
ARG B 311
ILE B 303
None
1.09A 2f78A-5xguB:
undetectable
2f78A-5xguB:
19.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2F78_B_BEZB1002_0
(HTH-TYPE
TRANSCRIPTIONAL
REGULATOR BENM)
5xgu RIBONUCLEASE R
(Escherichia
coli)
5 / 9 LEU B 321
LEU B 317
LEU B 310
ARG B 311
ILE B 303
None
1.07A 2f78B-5xguB:
undetectable
2f78B-5xguB:
19.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2F7A_B_BEZB1002_0
(HTH-TYPE
TRANSCRIPTIONAL
REGULATOR BENM)
5xgu RIBONUCLEASE R
(Escherichia
coli)
5 / 9 LEU B 321
LEU B 317
LEU B 310
ARG B 311
ILE B 303
None
1.16A 2f7aB-5xguB:
undetectable
2f7aB-5xguB:
19.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2F8D_B_BEZB1003_0
(HTH-TYPE
TRANSCRIPTIONAL
REGULATOR BENM)
5xgu RIBONUCLEASE R
(Escherichia
coli)
5 / 10 LEU B 321
LEU B 317
LEU B 310
ARG B 311
ILE B 303
None
1.06A 2f8dB-5xguB:
undetectable
2f8dB-5xguB:
19.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2WEK_B_DIFB1374_1
(ZINC-BINDING ALCOHOL
DEHYDROGENASE
DOMAIN-CONTAINING
PROTEIN 2)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 6 MET B 246
PRO B 248
ILE B 484
LEU B 490
None
1.09A 2wekB-5xguB:
undetectable
2wekB-5xguB:
21.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AG2_C_CHDC271_0
(CYTOCHROME C OXIDASE
SUBUNIT 3)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 7 LEU B 449
GLN B 450
PHE B 411
LEU B 415
None
0.81A 3ag2C-5xguB:
undetectable
3ag2C-5xguB:
15.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AG2_P_CHDP1271_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE 7A1
CYTOCHROME C OXIDASE
SUBUNIT 3)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 7 LEU B 449
GLN B 450
PHE B 411
LEU B 415
None
0.82A 3ag2P-5xguB:
undetectable
3ag2W-5xguB:
undetectable
3ag2P-5xguB:
15.24
3ag2W-5xguB:
6.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AG4_C_CHDC271_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE 7A1
CYTOCHROME C OXIDASE
SUBUNIT 3)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 8 LEU B 449
GLN B 450
PHE B 411
LEU B 415
None
0.83A 3ag4C-5xguB:
undetectable
3ag4J-5xguB:
undetectable
3ag4C-5xguB:
15.24
3ag4J-5xguB:
6.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AG4_P_CHDP1271_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE 7A1
CYTOCHROME C OXIDASE
SUBUNIT 3)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 7 LEU B 449
GLN B 450
PHE B 411
LEU B 415
None
0.86A 3ag4P-5xguB:
undetectable
3ag4W-5xguB:
undetectable
3ag4P-5xguB:
15.24
3ag4W-5xguB:
6.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ASN_C_CHDC271_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 7 LEU B 449
GLN B 450
PHE B 411
LEU B 415
None
0.81A 3asnC-5xguB:
undetectable
3asnJ-5xguB:
undetectable
3asnC-5xguB:
15.24
3asnJ-5xguB:
6.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BJW_G_SVRG506_2
(PHOSPHOLIPASE A2)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 5 VAL B 107
VAL B 108
GLN B  96
PHE B 104
None
1.36A 3bjwB-5xguB:
undetectable
3bjwB-5xguB:
10.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K37_A_BCZA468_1
(NEURAMINIDASE)
5xgu RIBONUCLEASE R
(Escherichia
coli)
3 / 3 ASP B 139
ARG B 143
ARG B 356
None
0.92A 3k37A-5xguB:
undetectable
3k37A-5xguB:
21.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_H_TFPH202_1
(PROTEIN S100-A4)
5xgu RIBONUCLEASE R
(Escherichia
coli)
5 / 12 PHE B 552
ILE B 582
PHE B 350
PHE B 352
SER B 241
None
1.43A 3ko0G-5xguB:
undetectable
3ko0H-5xguB:
undetectable
3ko0I-5xguB:
undetectable
3ko0J-5xguB:
undetectable
3ko0G-5xguB:
10.73
3ko0H-5xguB:
10.73
3ko0I-5xguB:
10.73
3ko0J-5xguB:
10.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_R_TFPR202_1
(PROTEIN S100-A4)
5xgu RIBONUCLEASE R
(Escherichia
coli)
5 / 11 PHE B 552
ILE B 582
SER B 241
PHE B 350
PHE B 352
None
1.45A 3ko0Q-5xguB:
undetectable
3ko0R-5xguB:
undetectable
3ko0S-5xguB:
undetectable
3ko0T-5xguB:
undetectable
3ko0Q-5xguB:
10.73
3ko0R-5xguB:
10.73
3ko0S-5xguB:
10.73
3ko0T-5xguB:
10.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NAI_A_URFA521_1
(RNA DEPENDENT RNA
POLYMERASE)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 5 ASP B 186
ASP B 195
ASP B 194
ARG B 485
MG  B 701 (-2.9A)
MG  B 701 (-2.6A)
None
None
1.29A 3naiA-5xguB:
undetectable
3naiA-5xguB:
21.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3O02_B_JN3B1_1
(CELL INVASION
PROTEIN SIPD)
5xgu RIBONUCLEASE R
(Escherichia
coli)
5 / 10 ARG B 294
ILE B 185
ALA B 293
LEU B 321
LEU B 317
None
1.24A 3o02A-5xguB:
undetectable
3o02B-5xguB:
undetectable
3o02A-5xguB:
19.11
3o02B-5xguB:
19.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3QF1_A_PZEA6951_1
(LACTOPEROXIDASE)
5xgu RIBONUCLEASE R
(Escherichia
coli)
3 / 3 HIS B 479
ARG B 486
GLU B 534
None
0.91A 3qf1A-5xguB:
undetectable
3qf1A-5xguB:
24.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FP9_D_SAMD401_1
(METHYLTRANSFERASE
NSUN4)
5xgu RIBONUCLEASE R
(Escherichia
coli)
3 / 3 ASP B 546
ARG B 542
ASP B 583
None
0.85A 4fp9D-5xguB:
undetectable
4fp9D-5xguB:
19.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PO0_A_NPSA601_1
(SERUM ALBUMIN)
5xgu RIBONUCLEASE R
(Escherichia
coli)
5 / 12 VAL B 575
LEU B 605
TYR B 596
VAL B 620
SER B 590
None
1.30A 4po0A-5xguB:
undetectable
4po0A-5xguB:
22.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PO0_A_NPSA601_1
(SERUM ALBUMIN)
5xgu RIBONUCLEASE R
(Escherichia
coli)
5 / 12 VAL B 575
TYR B 596
VAL B 620
LEU B 638
SER B 590
None
1.39A 4po0A-5xguB:
undetectable
4po0A-5xguB:
22.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XEY_A_1N1A601_2
(TYROSINE-PROTEIN
KINASE ABL1)
5xgu RIBONUCLEASE R
(Escherichia
coli)
3 / 3 MET B 246
ASP B 194
PHE B 193
None
1.06A 4xeyA-5xguB:
undetectable
4xeyA-5xguB:
19.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B1B_P_CHDP306_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 7 LEU B 449
GLN B 450
PHE B 411
LEU B 415
None
0.82A 5b1bP-5xguB:
undetectable
5b1bW-5xguB:
undetectable
5b1bP-5xguB:
15.24
5b1bW-5xguB:
6.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5F9Z_B_HFGB703_0
(AMINOACYL-TRNA
SYNTHETASE)
5xgu RIBONUCLEASE R
(Escherichia
coli)
5 / 12 LEU B 585
PHE B 574
SER B 567
SER B  84
GLY B   5
None
1.34A 5f9zB-5xguB:
undetectable
5f9zB-5xguB:
20.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IKR_A_ID8A601_2
(PROSTAGLANDIN G/H
SYNTHASE 2)
5xgu RIBONUCLEASE R
(Escherichia
coli)
3 / 3 VAL B 237
LEU B 128
MET B 136
None
0.85A 5ikrA-5xguB:
undetectable
5ikrA-5xguB:
21.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5QH8_A_ACTA302_0
(PEROXISOMAL COENZYME
A DIPHOSPHATASE
NUDT7)
5xgu RIBONUCLEASE R
(Escherichia
coli)
3 / 3 CYH B 550
MET B 629
ASN B 628
None
1.28A 5qh8A-5xguB:
undetectable
5qh8A-5xguB:
14.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5T7B_A_IPHA902_0
(PROTEIN ARGONAUTE-2)
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 7 LEU B 317
PRO B 316
LEU B 321
GLU B 322
None
1.05A 5t7bA-5xguB:
undetectable
5t7bA-5xguB:
22.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6C06_D_FI8D1404_0
(DNA-DIRECTED RNA
POLYMERASE SUBUNIT
BETA
DNA-DIRECTED RNA
POLYMERASE SUBUNIT
BETA')
5xgu RIBONUCLEASE R
(Escherichia
coli)
4 / 8 THR B 364
GLN B 365
THR B 298
GLU B 188
None
0.91A 6c06C-5xguB:
2.4
6c06C-5xguB:
undetectable