SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5ya1'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BX4_A_ADNA350_1
(PROTEIN (ADENOSINE
KINASE))		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 12 ASP A 253
GLY A  20
CYH A  90
ALA A  89
LEU A 175
 None
 1.03A 1bx4A-5ya1A:
undetectable		 1bx4A-5ya1A:
12.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HXB_A_ROCA100_1
(HIV-1 PROTEASE)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 12 GLY A  20
ALA A  19
GLY A 251
GLY A 252
ILE A 171
 None
 0.70A 1hxbA-5ya1A:
undetectable		 1hxbA-5ya1A:
20.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KXH_A_ACRA598_1
(ALPHA-AMYLASE)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 12 HIS A 299
VAL A 254
GLY A 252
ASN A 282
ILE A 412
 None
HEZ  A 703 ( 4.5A)
None
None
None
 1.21A 1kxhA-5ya1A:
undetectable		 1kxhA-5ya1A:
11.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NV8_A_SAMA300_0
(HEMK PROTEIN)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 12 THR A 224
GLY A 260
GLY A 257
VAL A 452
ALA A 457
 None
None
HEZ  A 703 ( 4.2A)
None
None
 0.91A 1nv8A-5ya1A:
undetectable		 1nv8A-5ya1A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1OHR_A_1UNA201_1
(ASPARTYLPROTEASE)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		6 / 11 GLY A  20
ALA A  19
ASP A  18
GLY A 252
VAL A  97
ILE A 171
 None
 1.39A 1ohrA-5ya1A:
undetectable		 1ohrA-5ya1A:
20.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1P93_B_DEXB2999_1
(GLUCOCORTICOID
RECEPTOR)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 12 MET A  92
ASN A 189
GLY A 191
GLN A 141
LEU A 145
 HEZ  A 703 (-4.1A)
None
None
None
None
 1.45A 1p93B-5ya1A:
undetectable		 1p93B-5ya1A:
16.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1P93_C_DEXC3999_1
(GLUCOCORTICOID
RECEPTOR)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 12 MET A  92
ASN A 189
GLY A 191
GLN A 141
LEU A 145
 HEZ  A 703 (-4.1A)
None
None
None
None
 1.50A 1p93C-5ya1A:
undetectable		 1p93C-5ya1A:
16.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Q8J_B_C2FB802_0
(5-METHYLTETRAHYDROFO
LATE S-HOMOCYSTEINE
METHYLTRANSFERASE)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 12 GLY A 428
ASP A 253
ILE A 171
GLY A  22
ARG A 319
 ATP  A 701 (-3.3A)
None
None
None
ATP  A 701 (-3.7A)
 1.19A 1q8jB-5ya1A:
undetectable		 1q8jB-5ya1A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WOP_A_FFOA2887_1
(AMINOMETHYLTRANSFERA
SE)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		3 / 3 ASP A 186
GLU A 308
ARG A 150
 None
 0.81A 1wopA-5ya1A:
undetectable		 1wopA-5ya1A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2A1H_A_GBNA502_1
(BRANCHED CHAIN
AMINOTRANSFERASE)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		4 / 8 GLY A 459
THR A 456
ALA A 455
VAL A 424
 None
HEZ  A 703 (-4.4A)
HEZ  A 703 (-3.7A)
None
 0.87A 2a1hA-5ya1A:
undetectable
2a1hB-5ya1A:
undetectable		 2a1hA-5ya1A:
13.26
2a1hB-5ya1A:
13.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVD_A_SAMA501_0
(CATECHOL-O-METHYLTRA
NSFERASE)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 12 GLY A 250
SER A 188
VAL A 248
ALA A 176
ALA A  89
 None
 1.45A 2avdA-5ya1A:
undetectable		 2avdA-5ya1A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2F16_H_BO2H1400_1
(PROTEASOME COMPONENT
PUP1
PROTEASOME COMPONENT
PUP3)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 11 SER A  88
ALA A  89
ALA A 468
GLY A 467
ALA A 463
 None
 1.11A 2f16H-5ya1A:
undetectable
2f16I-5ya1A:
undetectable		 2f16H-5ya1A:
15.32
2f16I-5ya1A:
14.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2F16_V_BO2V1401_1
(PROTEASOME COMPONENT
PUP1
PROTEASOME COMPONENT
PUP3)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 11 SER A  88
ALA A  89
ALA A 468
GLY A 467
ALA A 463
 None
 1.11A 2f16V-5ya1A:
undetectable
2f16W-5ya1A:
undetectable		 2f16V-5ya1A:
15.32
2f16W-5ya1A:
14.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VCT_B_ASDB1223_1
(GLUTATHIONE
S-TRANSFERASE A2)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		4 / 8 GLY A 478
LEU A 259
LEU A 256
PHE A  29
 None
 0.90A 2vctB-5ya1A:
undetectable		 2vctB-5ya1A:
15.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VCT_C_ASDC1223_1
(GLUTATHIONE
S-TRANSFERASE A2)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		4 / 8 GLY A 478
LEU A 259
LEU A 256
PHE A  29
 None
 0.87A 2vctC-5ya1A:
undetectable		 2vctC-5ya1A:
15.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2WUZ_B_TPFB1460_1
(LANOSTEROL
14-ALPHA-DEMETHYLASE
, PUTATIVE)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 10 ALA A 464
ALA A  86
THR A 245
LEU A 241
VAL A 231
 None
 1.30A 2wuzB-5ya1A:
undetectable		 2wuzB-5ya1A:
9.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XFS_B_J01B600_1
(ORF12)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 11 ALA A 463
SER A  88
ALA A 461
GLY A 459
PHE A  29
 None
 1.27A 2xfsB-5ya1A:
undetectable		 2xfsB-5ya1A:
10.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Z0Y_A_SAMA300_0
(PUTATIVE
UNCHARACTERIZED
PROTEIN TTHA0657)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		6 / 9 GLY A 251
GLY A 252
LEU A  17
ILE A 171
LEU A 175
ALA A  89
 None
 1.44A 2z0yA-5ya1A:
undetectable		 2z0yA-5ya1A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Z0Y_B_SAMB400_0
(PUTATIVE
UNCHARACTERIZED
PROTEIN TTHA0657)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		6 / 9 GLY A 251
GLY A 252
LEU A  17
ILE A 171
LEU A 175
ALA A  89
 None
 1.46A 2z0yB-5ya1A:
undetectable		 2z0yB-5ya1A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AQI_B_CHDB5_0
(FERROCHELATASE)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		3 / 3 PRO A 205
LEU A 208
ARG A 214
 PO4  A 704 (-4.4A)
None
None
 0.75A 3aqiB-5ya1A:
undetectable		 3aqiB-5ya1A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3EM4_A_DR7A100_1
(PROTEASE)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		6 / 11 GLY A  20
ALA A  19
ASP A  18
GLY A 252
VAL A  97
ILE A 171
 None
 1.41A 3em4A-5ya1A:
undetectable		 3em4A-5ya1A:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MG0_V_BO2V1401_1
(PROTEASOME COMPONENT
PUP1
PROTEASOME COMPONENT
PUP3)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 11 SER A  88
ALA A  89
ALA A 468
GLY A 467
ALA A 463
 None
 1.11A 3mg0V-5ya1A:
undetectable
3mg0W-5ya1A:
undetectable		 3mg0V-5ya1A:
15.32
3mg0W-5ya1A:
14.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MG0_Y_BO2Y1403_1
(PROTEASOME COMPONENT
PRE2
PROTEASOME COMPONENT
C5)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		6 / 12 ALA A 457
THR A 456
ALA A 455
VAL A  27
ALA A  89
ALA A 461
 None
HEZ  A 703 (-4.4A)
HEZ  A 703 (-3.7A)
None
None
None
 1.33A 3mg0Y-5ya1A:
undetectable
3mg0Z-5ya1A:
undetectable		 3mg0Y-5ya1A:
16.67
3mg0Z-5ya1A:
16.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LB0_A_ACTA401_0
(UNCHARACTERIZED
PROTEIN)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 9 GLY A 251
ASP A 173
SER A 172
GLY A 250
THR A 224
 None
 1.26A 4lb0A-5ya1A:
undetectable		 4lb0A-5ya1A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PH9_A_IBPA601_1
(PROSTAGLANDIN G/H
SYNTHASE 2)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 10 VAL A  87
LEU A 179
GLY A  39
ALA A  26
LEU A  17
 None
 1.09A 4ph9A-5ya1A:
undetectable		 4ph9A-5ya1A:
9.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PH9_B_IBPB601_1
(PROSTAGLANDIN G/H
SYNTHASE 2)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 10 VAL A  87
LEU A 179
GLY A  39
ALA A  26
LEU A  17
 None
 1.07A 4ph9B-5ya1A:
1.1		 4ph9B-5ya1A:
9.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RN6_B_15UB301_1
(THROMBIN HEAVY CHAIN)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 12 LEU A 179
ALA A 463
ALA A  86
VAL A 248
GLY A 250
 None
 0.97A 4rn6B-5ya1A:
undetectable		 4rn6B-5ya1A:
12.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4WNU_D_QDND602_1
(CYTOCHROME P450 2D6)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 10 GLY A 103
LEU A 213
ALA A 215
SER A 219
ALA A 184
 None
 1.35A 4wnuD-5ya1A:
undetectable		 4wnuD-5ya1A:
9.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5H4D_A_BBIA403_1
(NAD-DEPENDENT
PROTEIN DEACETYLASE
SIRTUIN-3,
MITOCHONDRIAL)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		4 / 6 ARG A  25
PHE A  29
GLU A 454
VAL A 452
 None
None
HEZ  A 703 (-4.3A)
None
 1.26A 5h4dA-5ya1A:
undetectable		 5h4dA-5ya1A:
15.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HFJ_E_SAME301_0
(ADENINE SPECIFIC DNA
METHYLTRANSFERASE
(DPNA))		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 12 ASP A 216
ALA A 215
ASP A 186
PRO A 298
GLY A 191
 None
 1.28A 5hfjE-5ya1A:
undetectable		 5hfjE-5ya1A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UUN_A_ACTA309_0
(GLUTATHIONE
S-TRANSFERASE-LIKE
PROTEIN)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		4 / 4 LEU A 256
GLY A 252
SER A  91
SER A 172
 None
 1.00A 5uunA-5ya1A:
undetectable		 5uunA-5ya1A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UUN_B_ACTB306_0
(GLUTATHIONE
S-TRANSFERASE-LIKE
PROTEIN)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		4 / 4 LEU A 256
GLY A 252
SER A  91
SER A 172
 None
 1.08A 5uunB-5ya1A:
undetectable		 5uunB-5ya1A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6ECT_A_SAMA1300_0
(STIE PROTEIN)		 5ya1 AUTOINDUCER-2 KINASE
(Escherichia
coli) 		5 / 12 LEU A 272
GLY A 429
GLY A 427
ILE A 449
LEU A 439
 HEZ  A 703 ( 4.3A)
ATP  A 701 ( 3.8A)
None
None
None
 1.02A 6ectA-5ya1A:
undetectable		 6ectA-5ya1A:
undetectable