SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5yf0'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1D1G_A_MTXA171_1
(DIHYDROFOLATE
REDUCTASE)
5yf0 -
(-)
5 / 12 ALA A 224
ARG A 196
ILE A 337
ARG A 406
ILE A 188
None
1.30A 1d1gA-5yf0A:
undetectable
1d1gA-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QU2_A_MRCA1993_2
(ISOLEUCYL-TRNA
SYNTHETASE)
5yf0 -
(-)
3 / 3 GLU A 217
TRP A 216
LYS A 395
None
1.32A 1qu2A-5yf0A:
undetectable
1qu2A-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QZZ_A_SAMA635_0
(ACLACINOMYCIN-10-HYD
ROXYLASE)
5yf0 -
(-)
5 / 12 TYR A 181
GLY A 208
GLY A 210
GLU A 229
ASP A 295
None
SAM  A 505 (-3.3A)
SAM  A 505 ( 3.9A)
SAM  A 505 (-2.9A)
SAM  A 505 (-3.6A)
0.99A 1qzzA-5yf0A:
14.7
1qzzA-5yf0A:
21.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1S9P_B_DESB459_2
(ESTROGEN-RELATED
RECEPTOR GAMMA)
5yf0 -
(-)
3 / 3 LEU A 235
HIS A  65
ILE A  69
None
0.56A 1s9pB-5yf0A:
undetectable
1s9pB-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1SBR_B_VIBB503_1
(YKOF)
5yf0 -
(-)
4 / 7 PHE A 403
ILE A 331
ILE A 328
THR A 311
None
0.94A 1sbrB-5yf0A:
undetectable
1sbrB-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UOB_A_PNNA1311_1
(DEACETOXYCEPHALOSPOR
IN C SYNTHETASE)
5yf0 -
(-)
3 / 3 ARG A 177
ARG A 213
ILE A 185
None
0.68A 1uobA-5yf0A:
undetectable
1uobA-5yf0A:
17.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2J2P_E_SC2E1289_1
(FICOLIN-2)
5yf0 -
(-)
4 / 6 ASP A 168
ARG A 177
ASP A 178
ASP A 277
SAM  A 505 ( 4.3A)
None
None
None
1.11A 2j2pE-5yf0A:
undetectable
2j2pF-5yf0A:
undetectable
2j2pE-5yf0A:
undetectable
2j2pF-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VDV_E_SAME1287_0
(TRNA
(GUANINE-N(7)-)-METH
YLTRANSFERASE)
5yf0 -
(-)
5 / 12 GLY A 208
GLY A 210
GLU A 229
CYH A 312
PHE A 313
SAM  A 505 (-3.3A)
SAM  A 505 ( 3.9A)
SAM  A 505 (-2.9A)
SAM  A 505 (-3.5A)
None
0.83A 2vdvE-5yf0A:
4.6
2vdvE-5yf0A:
19.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YVL_B_SAMB602_1
(HYPOTHETICAL PROTEIN)
5yf0 -
(-)
3 / 3 GLU A 229
ASP A 295
TYR A 324
SAM  A 505 (-2.9A)
SAM  A 505 (-3.6A)
None
0.83A 2yvlB-5yf0A:
14.8
2yvlB-5yf0A:
22.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YVL_C_SAMC604_1
(HYPOTHETICAL PROTEIN)
5yf0 -
(-)
4 / 4 GLY A 208
GLU A 229
ASP A 295
TYR A 324
SAM  A 505 (-3.3A)
SAM  A 505 (-2.9A)
SAM  A 505 (-3.6A)
None
0.83A 2yvlC-5yf0A:
14.6
2yvlC-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YVL_D_SAMD603_0
(HYPOTHETICAL PROTEIN)
5yf0 -
(-)
5 / 12 GLY A 208
GLY A 210
LEU A 214
ASP A 295
PHE A 296
SAM  A 505 (-3.3A)
SAM  A 505 ( 3.9A)
None
SAM  A 505 (-3.6A)
None
0.82A 2yvlD-5yf0A:
14.3
2yvlD-5yf0A:
22.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BXO_A_SAMA238_1
(N,N-DIMETHYLTRANSFER
ASE)
5yf0 -
(-)
3 / 3 TYR A 181
GLU A 229
ASP A 295
None
SAM  A 505 (-2.9A)
SAM  A 505 (-3.6A)
0.87A 3bxoA-5yf0A:
14.6
3bxoA-5yf0A:
19.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DXY_A_SAMA1_0
(TRNA
(GUANINE-N(7)-)-METH
YLTRANSFERASE)
5yf0 -
(-)
5 / 11 GLY A 208
GLY A 210
GLU A 229
ASP A 295
PHE A 313
SAM  A 505 (-3.3A)
SAM  A 505 ( 3.9A)
SAM  A 505 (-2.9A)
SAM  A 505 (-3.6A)
None
0.71A 3dxyA-5yf0A:
11.9
3dxyA-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3G2O_A_SAMA500_1
(PCZA361.24)
5yf0 -
(-)
3 / 3 ARG A 167
GLU A 229
ASP A 295
SAM  A 505 (-4.0A)
SAM  A 505 (-2.9A)
SAM  A 505 (-3.6A)
0.63A 3g2oA-5yf0A:
undetectable
3g2oA-5yf0A:
19.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_I_TFPI202_1
(PROTEIN S100-A4)
5yf0 -
(-)
5 / 12 SER A 231
SER A 237
PHE A 240
ILE A 122
LEU A 253
SAM  A 505 (-4.4A)
None
None
None
None
1.14A 3ko0G-5yf0A:
undetectable
3ko0H-5yf0A:
undetectable
3ko0I-5yf0A:
undetectable
3ko0J-5yf0A:
undetectable
3ko0G-5yf0A:
undetectable
3ko0H-5yf0A:
undetectable
3ko0I-5yf0A:
undetectable
3ko0J-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3M0W_A_P77A203_1
(PROTEIN S100-A4)
5yf0 -
(-)
5 / 10 SER A 231
PHE A  73
LEU A 253
SER A 237
PHE A 240
SAM  A 505 (-4.4A)
None
None
None
None
1.45A 3m0wA-5yf0A:
undetectable
3m0wB-5yf0A:
undetectable
3m0wI-5yf0A:
undetectable
3m0wJ-5yf0A:
undetectable
3m0wA-5yf0A:
undetectable
3m0wB-5yf0A:
undetectable
3m0wI-5yf0A:
undetectable
3m0wJ-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3M0W_C_P77C203_1
(PROTEIN S100-A4)
5yf0 -
(-)
6 / 10 SER A 231
PHE A  73
SER A 237
PHE A 240
ILE A 122
LEU A 253
SAM  A 505 (-4.4A)
None
None
None
None
None
1.35A 3m0wC-5yf0A:
undetectable
3m0wD-5yf0A:
undetectable
3m0wE-5yf0A:
undetectable
3m0wF-5yf0A:
undetectable
3m0wC-5yf0A:
undetectable
3m0wD-5yf0A:
undetectable
3m0wE-5yf0A:
undetectable
3m0wF-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3M0W_D_P77D203_1
(PROTEIN S100-A4)
5yf0 -
(-)
5 / 10 SER A 237
PHE A 240
LEU A 253
PHE A  73
SER A 231
None
None
None
None
SAM  A 505 (-4.4A)
1.37A 3m0wA-5yf0A:
undetectable
3m0wB-5yf0A:
undetectable
3m0wC-5yf0A:
undetectable
3m0wD-5yf0A:
undetectable
3m0wA-5yf0A:
undetectable
3m0wB-5yf0A:
undetectable
3m0wC-5yf0A:
undetectable
3m0wD-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3M0W_I_P77I203_1
(PROTEIN S100-A4)
5yf0 -
(-)
5 / 10 LEU A 253
SER A 237
PHE A 240
ILE A 122
SER A 231
None
None
None
None
SAM  A 505 (-4.4A)
1.23A 3m0wA-5yf0A:
undetectable
3m0wB-5yf0A:
undetectable
3m0wI-5yf0A:
undetectable
3m0wJ-5yf0A:
undetectable
3m0wA-5yf0A:
undetectable
3m0wB-5yf0A:
undetectable
3m0wI-5yf0A:
undetectable
3m0wJ-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OPE_A_SAMA7_0
(PROBABLE
HISTONE-LYSINE
N-METHYLTRANSFERASE
ASH1L)
5yf0 -
(-)
5 / 12 GLY A 294
TRP A 230
TYR A 324
ASN A 228
ILE A 331
None
None
None
SAM  A 505 (-3.7A)
None
1.36A 3opeA-5yf0A:
undetectable
3opeA-5yf0A:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OPE_B_SAMB8_0
(PROBABLE
HISTONE-LYSINE
N-METHYLTRANSFERASE
ASH1L)
5yf0 -
(-)
5 / 9 GLY A 294
TRP A 230
TYR A 324
ASN A 228
ILE A 331
None
None
None
SAM  A 505 (-3.7A)
None
1.43A 3opeB-5yf0A:
undetectable
3opeB-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A7T_A_5FWA1002_1
(SUPEROXIDE DISMUTASE
[CU-ZN])
5yf0 -
(-)
3 / 3 ASN A 340
TRP A 338
ASP A 316
None
1.27A 4a7tA-5yf0A:
undetectable
4a7tF-5yf0A:
undetectable
4a7tA-5yf0A:
undetectable
4a7tF-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4P6X_G_HCYG900_2
(GLUCOCORTICOID
RECEPTOR)
5yf0 -
(-)
3 / 3 LEU A 162
MET A 234
TYR A 251
None
SAM  A 505 (-4.2A)
None
0.71A 4p6xG-5yf0A:
undetectable
4p6xG-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QC6_B_KANB201_2
(BIFUNCTIONAL AAC/APH)
5yf0 -
(-)
3 / 3 LEU A 344
ASP A 316
TYR A 346
None
0.63A 4qc6B-5yf0A:
2.0
4qc6B-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YPA_A_SAMA3004_0
(HISTONE-LYSINE
N-METHYLTRANSFERASE
ASH1L)
5yf0 -
(-)
5 / 12 GLY A 294
TRP A 230
TYR A 324
ASN A 228
ILE A 331
None
None
None
SAM  A 505 (-3.7A)
None
1.49A 4ypaA-5yf0A:
undetectable
4ypaA-5yf0A:
20.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YPE_A_SAMA2304_0
(HISTONE-LYSINE
N-METHYLTRANSFERASE
ASH1L)
5yf0 -
(-)
5 / 12 GLY A 294
TRP A 230
TYR A 324
ASN A 228
ILE A 331
None
None
None
SAM  A 505 (-3.7A)
None
1.49A 4ypeA-5yf0A:
undetectable
4ypeA-5yf0A:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YPE_B_SAMB2304_0
(HISTONE-LYSINE
N-METHYLTRANSFERASE
ASH1L)
5yf0 -
(-)
5 / 11 GLY A 294
TRP A 230
TYR A 324
ASN A 228
ILE A 331
None
None
None
SAM  A 505 (-3.7A)
None
1.48A 4ypeB-5yf0A:
undetectable
4ypeB-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DZK_3_BEZ3801_0
(ATP-DEPENDENT CLP
PROTEASE PROTEOLYTIC
SUBUNIT 1
BEZ-LEU-LEU)
5yf0 -
(-)
4 / 4 LEU A 205
ILE A 204
GLY A 227
ILE A 218
None
0.87A 5dzk3-5yf0A:
undetectable
5dzkm-5yf0A:
undetectable
5dzk3-5yf0A:
undetectable
5dzkm-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5EML_A_SAMA701_1
(PROTEIN ARGININE
N-METHYLTRANSFERASE
5)
5yf0 -
(-)
4 / 6 TYR A 181
GLY A 208
GLU A 229
ASP A 295
None
SAM  A 505 (-3.3A)
SAM  A 505 (-2.9A)
SAM  A 505 (-3.6A)
0.84A 5emlA-5yf0A:
8.8
5emlA-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ERG_B_SAMB401_1
(TRNA
(ADENINE(58)-N(1))-M
ETHYLTRANSFERASE
CATALYTIC SUBUNIT
TRM61)
5yf0 -
(-)
4 / 7 GLY A 208
GLY A 210
GLU A 229
ASP A 295
SAM  A 505 (-3.3A)
SAM  A 505 ( 3.9A)
SAM  A 505 (-2.9A)
SAM  A 505 (-3.6A)
0.71A 5ergB-5yf0A:
11.1
5ergB-5yf0A:
19.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JWA_H_ACTH614_0
(NADH DEHYDROGENASE,
PUTATIVE)
5yf0 -
(-)
4 / 6 ILE A 325
VAL A 405
VAL A 368
TRP A 338
None
0.82A 5jwaH-5yf0A:
2.9
5jwaH-5yf0A:
22.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5YF0_A_ACTA504_0
(CARNOSINE
N-METHYLTRANSFERASE)
5yf0 -
(-)
4 / 4 VAL A 388
ASN A 389
LYS A 395
TYR A 396
ACT  A 504 (-4.0A)
None
None
ACT  A 504 (-4.7A)
0.02A 5yf0A-5yf0A:
55.3
5yf0A-5yf0A:
undetectable
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5YF0_A_SAMA505_0
(CARNOSINE
N-METHYLTRANSFERASE)
5yf0 -
(-)
11 / 12 GLY A 208
GLY A 210
ASN A 228
SER A 231
MET A 234
PHE A 296
CYH A 312
PHE A 313
THR A 317
TYR A 324
TYR A 386
SAM  A 505 (-3.3A)
SAM  A 505 ( 3.9A)
SAM  A 505 (-3.7A)
SAM  A 505 (-4.4A)
SAM  A 505 (-4.2A)
None
SAM  A 505 (-3.5A)
None
SAM  A 505 (-3.4A)
None
SAM  A 505 (-4.5A)
0.00A 5yf0A-5yf0A:
55.3
5yf0A-5yf0A:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5YF0_A_SAMA505_0
(CARNOSINE
N-METHYLTRANSFERASE)
5yf0 -
(-)
9 / 12 GLY A 208
GLY A 210
ASN A 228
TRP A 230
MET A 234
CYH A 312
PHE A 313
THR A 317
TYR A 386
SAM  A 505 (-3.3A)
SAM  A 505 ( 3.9A)
SAM  A 505 (-3.7A)
None
SAM  A 505 (-4.2A)
SAM  A 505 (-3.5A)
None
SAM  A 505 (-3.4A)
SAM  A 505 (-4.5A)
0.79A 5yf0A-5yf0A:
55.3
5yf0A-5yf0A:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5YF0_A_SAMA505_1
(CARNOSINE
N-METHYLTRANSFERASE)
5yf0 -
(-)
5 / 5 GLN A 164
ARG A 167
TYR A 181
GLU A 229
ASP A 295
SAM  A 505 (-3.6A)
SAM  A 505 (-4.0A)
None
SAM  A 505 (-2.9A)
SAM  A 505 (-3.6A)
0.00A 5yf0A-5yf0A:
55.3
5yf0A-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5YF0_B_ACTB502_0
(CARNOSINE
N-METHYLTRANSFERASE)
5yf0 -
(-)
4 / 4 VAL A 388
ASN A 389
LYS A 395
TYR A 396
ACT  A 504 (-4.0A)
None
None
ACT  A 504 (-4.7A)
0.09A 5yf0B-5yf0A:
52.3
5yf0B-5yf0A:
undetectable
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5YF0_B_SAMB503_0
(CARNOSINE
N-METHYLTRANSFERASE)
5yf0 -
(-)
12 / 12 GLN A 164
GLY A 208
ASN A 228
TRP A 230
SER A 231
MET A 234
PHE A 296
CYH A 312
PHE A 313
THR A 317
TYR A 324
TYR A 386
SAM  A 505 (-3.6A)
SAM  A 505 (-3.3A)
SAM  A 505 (-3.7A)
None
SAM  A 505 (-4.4A)
SAM  A 505 (-4.2A)
None
SAM  A 505 (-3.5A)
None
SAM  A 505 (-3.4A)
None
SAM  A 505 (-4.5A)
0.14A 5yf0B-5yf0A:
52.3
5yf0B-5yf0A:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5YF0_B_SAMB503_1
(CARNOSINE
N-METHYLTRANSFERASE)
5yf0 -
(-)
4 / 4 ARG A 167
TYR A 181
GLU A 229
ASP A 295
SAM  A 505 (-4.0A)
None
SAM  A 505 (-2.9A)
SAM  A 505 (-3.6A)
0.07A 5yf0B-5yf0A:
52.3
5yf0B-5yf0A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B54_A_OAQA302_0
(SULFOTRANSFERASE)
5yf0 -
(-)
5 / 12 ILE A 122
LEU A 123
PHE A 240
THR A 161
LEU A 158
None
1.21A 6b54A-5yf0A:
undetectable
6b54A-5yf0A:
21.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6NM4_A_SAMA402_0
(HISTONE-LYSINE
N-METHYLTRANSFERASE
PRDM9)
5yf0 -
(-)
4 / 7 ALA A 209
GLY A 210
LEU A 211
TYR A 386
None
SAM  A 505 ( 3.9A)
None
SAM  A 505 (-4.5A)
0.80A 6nm4A-5yf0A:
undetectable
6nm4A-5yf0A:
18.89