SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5ygh'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1M8E_B_H4BB903_1
(INDUCIBLE NITRIC
OXIDE SYNTHASE)
5ygh CAPSID PROTEIN
(Zika
virus)
3 / 3 ARG A  55
ILE A  66
TRP A  69
None
1.04A 1m8eB-5yghA:
undetectable
1m8eB-5yghA:
12.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NOD_B_H4BB902_1
(NITRIC OXIDE
SYNTHASE)
5ygh CAPSID PROTEIN
(Zika
virus)
3 / 3 ARG A  55
ILE A  66
TRP A  69
None
0.94A 1nodB-5yghA:
undetectable
1nodB-5yghA:
12.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QOM_A_H4BA902_1
(NITRIC OXIDE
SYNTHASE)
5ygh CAPSID PROTEIN
(Zika
virus)
3 / 3 ARG A  55
ILE A  66
TRP A  69
None
1.03A 1qomA-5yghA:
undetectable
1qomA-5yghA:
12.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NOD_B_H4BB902_1
(NITRIC OXIDE
SYNTHASE)
5ygh CAPSID PROTEIN
(Zika
virus)
3 / 3 ARG A  55
ILE A  66
TRP A  69
None
0.95A 2nodB-5yghA:
undetectable
2nodB-5yghA:
12.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3E68_A_H4BA902_1
(NITRIC OXIDE
SYNTHASE, INDUCIBLE)
5ygh CAPSID PROTEIN
(Zika
virus)
3 / 3 ARG A  55
ILE A  66
TRP A  69
None
0.96A 3e68A-5yghA:
undetectable
3e68A-5yghA:
12.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3E6T_B_H4BB902_1
(NITRIC OXIDE
SYNTHASE, INDUCIBLE)
5ygh CAPSID PROTEIN
(Zika
virus)
3 / 3 ARG A  55
ILE A  66
TRP A  69
None
1.00A 3e6tB-5yghA:
undetectable
3e6tB-5yghA:
12.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3E7I_B_H4BB2902_1
(NITRIC OXIDE
SYNTHASE, INDUCIBLE)
5ygh CAPSID PROTEIN
(Zika
virus)
3 / 3 ARG A  55
ILE A  66
TRP A  69
None
1.12A 3e7iB-5yghA:
undetectable
3e7iB-5yghA:
12.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NW2_B_H4BB902_1
(NITRIC OXIDE
SYNTHASE, INDUCIBLE)
5ygh CAPSID PROTEIN
(Zika
virus)
3 / 3 ARG A  55
ILE A  66
TRP A  69
None
1.08A 3nw2B-5yghA:
undetectable
3nw2B-5yghA:
12.63