SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5ykd'
List of Similar Pattern of Amino Acids| DrReposER ID / Desc. | Hit PDBID |
Hit Macromolecule |
Res. Matches |
Interface | HETATM | RMSD | Dali Z-score |
Seq. Identity (%) |
View | Dock | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1E9Y_B_HAEB800_1 (UREASE SUBUNIT BETA) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 4 / 5 | HIS A 59HIS A 183HIS A 239ASP A 316 | ZN A 502 (-3.4A) ZN A 501 (-3.3A) ZN A 501 (-3.4A) ZN A 502 (-2.9A) | 0.42A | 1e9yB-5ykdA:21.8 | 1e9yB-5ykdA:8.43 | |||
| 1FWE_C_HAEC989_1 (UREASE) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 6 | HIS A 59HIS A 61HIS A 183HIS A 239ASP A 316 | ZN A 502 (-3.4A) ZN A 502 (-3.3A) ZN A 501 (-3.3A) ZN A 501 (-3.4A) ZN A 502 (-2.9A) | 0.58A | 1fweC-5ykdA:22.7 | 1fweC-5ykdA:11.35 | |||
| 1MXG_A_ACRA443_1 (ALPHA AMYLASE) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 4 / 8 | SER A 169THR A 165ASP A 163GLU A 219 | None | 1.23A | 1mxgA-5ykdA:4.2 | 1mxgA-5ykdA:10.65 | |||
| 1O86_A_LPRA702_1 (ANGIOTENSINCONVERTING ENZYME) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 12 | GLU A 262HIS A 239PHE A 66HIS A 183TYR A 155 | None ZN A 501 (-3.4A)None ZN A 501 (-3.3A)None | 1.29A | 1o86A-5ykdA:undetectable | 1o86A-5ykdA:10.04 | |||
| 1OLT_A_SAMA501_0 (OXYGEN-INDEPENDENTCOPROPORPHYRINOGENIII OXIDASE) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 12 | CYH A 319THR A 60ASP A 57GLY A 82ALA A 406 | None | 1.28A | 1oltA-5ykdA:2.7 | 1oltA-5ykdA:undetectable | |||
| 1Q23_G_FUAG708_1 (CHLORAMPHENICOLACETYLTRANSFERASE) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 11 | PHE A 152SER A 101LEU A 140VAL A 146PHE A 149 | KCX A 150 ( 4.0A)NoneNoneNoneNone | 1.37A | 1q23G-5ykdA:undetectable | 1q23G-5ykdA:16.44 | |||
| 1Q8J_B_C2FB802_0 (5-METHYLTETRAHYDROFOLATE S-HOMOCYSTEINEMETHYLTRANSFERASE) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 12 | GLU A 343GLY A 441ILE A 90GLY A 78ILE A 342 | None | 1.13A | 1q8jB-5ykdA:2.5 | 1q8jB-5ykdA:undetectable | |||
| 2OCF_A_ESTA596_1 (ESTROGEN RECEPTOR) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 10 | LEU A 237ALA A 245GLU A 248ARG A 226LEU A 310 | None | 1.47A | 2ocfA-5ykdA:undetectable | 2ocfA-5ykdA:14.77 | |||
| 2Q0J_B_BEZB500_0 (QUINOLONE SIGNALRESPONSE PROTEIN) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 11 | ASP A 316HIS A 59GLU A 185HIS A 239SER A 289 | ZN A 502 (-2.9A) ZN A 502 (-3.4A)None ZN A 501 (-3.4A)None | 1.21A | 2q0jB-5ykdA:undetectable | 2q0jB-5ykdA:undetectable | |||
| 2V41_G_BEZG1222_0 (PEROXIREDOXIN 6.) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 4 / 8 | THR A 372GLU A 262ARG A 345ALA A 314 | None | 1.16A | 2v41G-5ykdA:undetectable2v41H-5ykdA:undetectable | 2v41G-5ykdA:undetectable2v41H-5ykdA:undetectable | |||
| 3HRD_E_NIOE5660_1 (NICOTINATEDEHYDROGENASE LARGEMOLYBDOPTERINSUBUNITNICOTINATEDEHYDROGENASE MEDIUMMOLYBDOPTERINSUBUNIT) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 3 / 3 | GLU A 171GLU A 175TRP A 129 | None | 1.20A | 3hrdA-5ykdA:undetectable3hrdE-5ykdA:undetectable3hrdF-5ykdA:undetectable | 3hrdA-5ykdA:10.593hrdE-5ykdA:10.593hrdF-5ykdA:16.10 | |||
| 3OZW_A_KKKA413_1 (FLAVOHEMOGLOBIN) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 4 / 8 | ILE A 31ALA A 389LEU A 51PRO A 380 | None | 0.83A | 3ozwA-5ykdA:undetectable | 3ozwA-5ykdA:15.41 | |||
| 3SFU_B_RBVB601_1 (RNA POLYMERASE) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 9 | ASP A 414THR A 282TYR A 286GLY A 285LEU A 270 | None | 1.25A | 3sfuB-5ykdA:undetectable | 3sfuB-5ykdA:11.38 | |||
| 3UJ7_A_SAMA301_0 (PHOSPHOETHANOLAMINEN-METHYLTRANSFERASE) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 12 | LEU A 51ILE A 5ILE A 31ASP A 390ALA A 391 | None | 0.88A | 3uj7A-5ykdA:undetectable | 3uj7A-5ykdA:undetectable | |||
| 3UJ7_B_SAMB302_0 (PHOSPHOETHANOLAMINEN-METHYLTRANSFERASE) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 12 | LEU A 51ILE A 5ILE A 31ASP A 390ALA A 391 | None | 0.89A | 3uj7B-5ykdA:undetectable | 3uj7B-5ykdA:undetectable | |||
| 4AQ7_A_LEUA902_0 (LEUCINE--TRNA LIGASE) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 4 / 7 | LEU A 264ASP A 316GLU A 185HIS A 183 | None ZN A 502 (-2.9A)None ZN A 501 (-3.3A) | 1.26A | 4aq7A-5ykdA:undetectable | 4aq7A-5ykdA:undetectable | |||
| 4FGL_D_CLQD303_1 (RIBOSYLDIHYDRONICOTINAMIDE DEHYDROGENASE[QUINONE]) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 4 / 6 | GLY A 85GLY A 86GLU A 343ILE A 342 | None | 0.94A | 4fglD-5ykdA:undetectable | 4fglD-5ykdA:undetectable | |||
| 4H9M_A_HAEA929_1 (UREASE) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 4 / 5 | HIS A 59HIS A 183HIS A 239ASP A 316 | ZN A 502 (-3.4A) ZN A 501 (-3.3A) ZN A 501 (-3.4A) ZN A 502 (-2.9A) | 0.41A | 4h9mA-5ykdA:23.5 | 4h9mA-5ykdA:7.67 | |||
| 4K17_B_OHBB701_0 (LEUCINE-RICHREPEAT-CONTAININGPROTEIN 16A) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 4 / 5 | GLU A 185ARG A 212PRO A 290SER A 241 | None | 1.36A | 4k17B-5ykdA:undetectable | 4k17B-5ykdA:undetectable | |||
| 4KIC_A_SAMA401_0 (METHYLTRANSFERASEMPPJ) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 12 | GLY A 55ALA A 373ALA A 389ARG A 386MET A 52 | None | 1.04A | 4kicA-5ykdA:undetectable | 4kicA-5ykdA:undetectable | |||
| 4KIC_B_SAMB401_0 (METHYLTRANSFERASEMPPJ) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 12 | GLY A 55ALA A 373ALA A 389ARG A 386MET A 52 | None | 1.08A | 4kicB-5ykdA:undetectable | 4kicB-5ykdA:undetectable | |||
| 4LRH_D_FOLD301_1 (FOLATE RECEPTORALPHA) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 3 / 3 | HIS A 208TRP A 280SER A 289 | None | 1.16A | 4lrhD-5ykdA:undetectable | 4lrhD-5ykdA:undetectable | |||
| 4QGI_A_ROCA101_1 (PROTEASE) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 11 | ASP A 344GLY A 341ASP A 57THR A 79GLY A 78 | None | 0.99A | 4qgiA-5ykdA:undetectable | 4qgiA-5ykdA:21.50 | |||
| 4UBP_C_HAEC800_1 (PROTEIN (UREASE(CHAIN C))) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 6 | HIS A 59HIS A 61HIS A 183HIS A 239ASP A 316 | ZN A 502 (-3.4A) ZN A 502 (-3.3A) ZN A 501 (-3.3A) ZN A 501 (-3.4A) ZN A 502 (-2.9A) | 0.44A | 4ubpC-5ykdA:22.7 | 4ubpC-5ykdA:8.87 | |||
| 4ZXI_A_GLYA1402_0 (TYROCIDINESYNTHETASE 3) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 4 / 7 | ASP A 57ILE A 90GLY A 78THR A 315 | None | 1.09A | 4zxiA-5ykdA:undetectable | 4zxiA-5ykdA:undetectable | |||
| 5BXN_V_BO2V301_1 (PROTEASOME SUBUNITBETA TYPE-2PROTEASOME SUBUNITBETA TYPE-3) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 11 | THR A 79SER A 89ALA A 117GLY A 450ASP A 390 | None | 1.35A | 5bxnV-5ykdA:undetectable5bxnW-5ykdA:undetectable | 5bxnV-5ykdA:15.025bxnW-5ykdA:17.99 | |||
| 5DQF_A_CZEA613_1 (SERUM ALBUMIN) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 9 | ARG A 345LEU A 264GLY A 266LEU A 268LEU A 305 | None | 1.16A | 5dqfA-5ykdA:undetectable | 5dqfA-5ykdA:8.28 | |||
| 5HWA_A_GCSA303_1 (CHITOSANASE) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 4 / 5 | ASP A 57HIS A 59GLY A 341ALA A 340 | None ZN A 502 (-3.4A)NoneNone | 0.94A | 5hwaA-5ykdA:undetectable | 5hwaA-5ykdA:14.45 | |||
| 5LF3_K_BO2K305_1 (PROTEASOME SUBUNITBETA TYPE-5PROTEASOME SUBUNITBETA TYPE-1) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 11 | ALA A 80THR A 79GLY A 86GLY A 85ALA A 84 | None | 0.90A | 5lf3K-5ykdA:undetectable5lf3L-5ykdA:undetectable | 5lf3K-5ykdA:17.655lf3L-5ykdA:17.71 | |||
| 5LF3_Y_BO2Y305_1 (PROTEASOME SUBUNITBETA TYPE-5PROTEASOME SUBUNITBETA TYPE-1) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 11 | ALA A 80THR A 79GLY A 86GLY A 85ALA A 84 | None | 0.89A | 5lf3Y-5ykdA:undetectable5lf3Z-5ykdA:undetectable | 5lf3Y-5ykdA:17.655lf3Z-5ykdA:17.71 | |||
| 5LF7_K_6V8K305_0 (PROTEASOME SUBUNITBETA TYPE-1PROTEASOME SUBUNITBETA TYPE-5) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 11 | ALA A 80THR A 79GLY A 86GLY A 85ALA A 84 | None | 0.92A | 5lf7K-5ykdA:undetectable5lf7L-5ykdA:undetectable | 5lf7K-5ykdA:undetectable5lf7L-5ykdA:undetectable | |||
| 5LF7_Y_6V8Y306_0 (PROTEASOME SUBUNITBETA TYPE-1PROTEASOME SUBUNITBETA TYPE-5) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 11 | ALA A 80THR A 79GLY A 86GLY A 85ALA A 84 | None | 0.92A | 5lf7Y-5ykdA:undetectable5lf7Z-5ykdA:undetectable | 5lf7Y-5ykdA:undetectable5lf7Z-5ykdA:undetectable | |||
| 5SYJ_A_NIZA810_1 (CATALASE-PEROXIDASE) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 4 / 6 | ARG A 253HIS A 311LEU A 367SER A 307 | None | 1.11A | 5syjA-5ykdA:undetectable | 5syjA-5ykdA:8.10 | |||
| 5SYJ_B_NIZB810_1 (CATALASE-PEROXIDASE) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 4 / 6 | ARG A 253HIS A 311LEU A 367SER A 307 | None | 1.12A | 5syjB-5ykdA:undetectable | 5syjB-5ykdA:8.10 | |||
| 5X23_A_LSNA504_1 (CYTOCHROME P450 2C9) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 4 / 8 | PHE A 93ILE A 95PHE A 152PRO A 336 | KCX A 150 ( 4.0A)NoneKCX A 150 ( 4.0A)None | 1.12A | 5x23A-5ykdA:undetectable | 5x23A-5ykdA:10.16 | |||
| 5Y2T_A_8LXA501_0 (PEROXISOMEPROLIFERATOR-ACTIVATED RECEPTOR GAMMA) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 12 | LEU A 235PHE A 152LEU A 264ILE A 240HIS A 61 | NoneKCX A 150 ( 4.0A)NoneNone ZN A 502 (-3.3A) | 1.28A | 5y2tA-5ykdA:undetectable | 5y2tA-5ykdA:undetectable | |||
| 6A94_B_ZOTB3001_0 (5-HYDROXYTRYPTAMINERECEPTOR 2A,SOLUBLECYTOCHROME B562) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 5 / 12 | THR A 370VAL A 394GLY A 54SER A 369VAL A 354 | None | 1.19A | 6a94B-5ykdA:undetectable | 6a94B-5ykdA:undetectable | |||
| 6JI6_A_ACTA305_0 (GLUTATHIONES-TRANSFERASECLASS-MU 26 KDAISOZYME) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 4 / 5 | GLY A 46LEU A 44SER A 428GLN A 49 | None | 1.11A | 6ji6A-5ykdA:undetectable | 6ji6A-5ykdA:undetectable | |||
| 6N7F_A_RBFA502_0 (PUTATIVE GLUTATHIONEREDUCTASE (GR)) |
5ykd | D-HYDANTOINASE/DIHYDROPYRIMIDINASE (Pseudomonasaeruginosa) | 4 / 7 | GLY A 266HIS A 409ASN A 416GLY A 285 | None | 0.96A | 6n7fA-5ykdA:undetectable | 6n7fA-5ykdA:20.93 |