SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '6apd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ICV_D_NIOD706_1
(OXYGEN-INSENSITIVE
NAD(P)H
NITROREDUCTASE)		 6apd AM22 FAB HEAVY
CHAIN,IGH@ PROTEIN
(Homo
sapiens) 		4 / 5 GLU D  52
GLY D  50
SER D  33
THR D  94
 None
 1.28A 1icvC-6apdD:
undetectable
1icvD-6apdD:
undetectable		 1icvC-6apdD:
15.38
1icvD-6apdD:
15.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BRF_A_SORA2_0
(LIN-12 AND GLP-1
PHENOTYPE PROTEIN 1,
ISOFORM A)		 6apd AM22 FAB HEAVY
CHAIN,IGH@ PROTEIN
(Homo
sapiens) 		3 / 3 LYS D  12
LYS D  19
VAL D  18
 None
 0.95A 3brfA-6apdD:
undetectable		 3brfA-6apdD:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DRZ_A_H8JA1206_0
(5HT2B RECEPTOR, BRIL
CHIMERA)		 6apd AM22 FAB HEAVY
CHAIN,IGH@ PROTEIN
(Homo
sapiens) 		5 / 12 VAL D 207
THR D 205
VAL D 211
GLY D 118
VAL D 152
 None
 1.02A 6drzA-6apdD:
undetectable		 6drzA-6apdD:
undetectable