SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '6bbd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1QZR_B_CDXB901_1 (DNA TOPOISOMERASE II)	6bbd	PULMONARY SURFACTANT-ASSOCIATE D PROTEIN D (Sus scrofa)	4 / 7	THR A 285 ASN A 236 LEU A 353 GLN A 287	None	0.94A	1qzrA-6bbdA: undetectable	1qzrA-6bbdA: 12.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4V2Z_C_Y70C151_1 (CEREBLON ISOFORM 4)	6bbd	PULMONARY SURFACTANT-ASSOCIATE D PROTEIN D (Sus scrofa)	4 / 8	ASN A 236 PRO A 235 PHE A 234 TYR A 228	None	1.18A	4v2zC-6bbdA: undetectable	4v2zC-6bbdA: 20.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5AMH_A_EF2A151_1 (CEREBLON ISOFORM 4)	6bbd	PULMONARY SURFACTANT-ASSOCIATE D PROTEIN D (Sus scrofa)	4 / 7	ASN A 236 PRO A 235 PHE A 234 TYR A 228	None	1.33A	5amhA-6bbdA: undetectable	5amhA-6bbdA: 20.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5OH1_C_9UQC202_0 (CEREBLON ISOFORM 4)	6bbd	PULMONARY SURFACTANT-ASSOCIATE D PROTEIN D (Sus scrofa)	4 / 8	ASN A 236 PRO A 235 PHE A 234 TYR A 228	None	1.39A	5oh1C-6bbdA: undetectable	5oh1C-6bbdA: undetectable

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["1QZR_B_CDXB901_1","DNA TOPOISOMERASE II;DNA TOPOISOMERASE II","6bbd","PULMONARY SURFACTANT-ASSOCIATED PROTEIN D","Sus scrofa",4,"THR A 285;ASN A 236;LEU A 353;GLN A 287","None","0.94A","1qzrA-6bbdA:undetectable","1qzrA-6bbdA:12.56"],["4V2Z_C_Y70C151_1","CEREBLON ISOFORM 4","6bbd","PULMONARY SURFACTANT-ASSOCIATED PROTEIN D","Sus scrofa",4,"ASN A 236;PRO A 235;PHE A 234;TYR A 228","None","1.18A","4v2zC-6bbdA:undetectable","4v2zC-6bbdA:20.69"],["5AMH_A_EF2A151_1","CEREBLON ISOFORM 4","6bbd","PULMONARY SURFACTANT-ASSOCIATED PROTEIN D","Sus scrofa",4,"ASN A 236;PRO A 235;PHE A 234;TYR A 228","None","1.33A","5amhA-6bbdA:undetectable","5amhA-6bbdA:20.69"],["5OH1_C_9UQC202_0","CEREBLON ISOFORM 4","6bbd","PULMONARY SURFACTANT-ASSOCIATED PROTEIN D","Sus scrofa",4,"ASN A 236;PRO A 235;PHE A 234;TYR A 228","None","1.39A","5oh1C-6bbdA:undetectable","5oh1C-6bbdA:undetectable"]]