SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '6d0p'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BX4_A_ADNA355_1
(PROTEIN (ADENOSINE
KINASE))
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
5 / 12 VAL A  69
ALA A 173
GLY A 172
ALA A 174
ILE A 143
None
0.93A 1bx4A-6d0pA:
undetectable
1bx4A-6d0pA:
13.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DTT_A_H4BA1003_1
(HYPOTHETICAL PROTEIN
PH0634)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
5 / 10 HIS A  61
HIS A  63
HIS A 105
GLU A 107
PHE A  20
MN  A 303 ( 3.3A)
MN  A 303 (-3.4A)
MN  A 303 (-3.4A)
MN  A 303 ( 2.9A)
PEG  A 304 ( 4.2A)
1.29A 2dttA-6d0pA:
undetectable
2dttC-6d0pA:
undetectable
2dttA-6d0pA:
19.13
2dttC-6d0pA:
19.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DTT_E_H4BE1004_1
(HYPOTHETICAL PROTEIN
PH0634)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
5 / 11 PHE A  20
HIS A  61
HIS A  63
HIS A 105
GLU A 107
PEG  A 304 ( 4.2A)
MN  A 303 ( 3.3A)
MN  A 303 (-3.4A)
MN  A 303 (-3.4A)
MN  A 303 ( 2.9A)
1.24A 2dttD-6d0pA:
undetectable
2dttE-6d0pA:
undetectable
2dttD-6d0pA:
19.13
2dttE-6d0pA:
19.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CZV_A_AZMA263_1
(CARBONIC ANHYDRASE
13)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
5 / 12 HIS A  61
HIS A  63
HIS A 105
THR A  68
VAL A  22
MN  A 303 ( 3.3A)
MN  A 303 (-3.4A)
MN  A 303 (-3.4A)
MN  A 303 ( 4.9A)
None
1.14A 3czvA-6d0pA:
undetectable
3czvB-6d0pA:
undetectable
3czvA-6d0pA:
18.75
3czvB-6d0pA:
18.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3FI0_B_TRPB1001_0
(TRYPTOPHANYL-TRNA
SYNTHETASE)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
4 / 8 VAL A 127
ILE A 163
VAL A  94
GLN A 141
None
0.78A 3fi0B-6d0pA:
undetectable
3fi0B-6d0pA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3FI0_E_TRPE1001_0
(TRYPTOPHANYL-TRNA
SYNTHETASE)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
4 / 7 VAL A 127
ILE A 163
VAL A  94
GLN A 141
None
0.87A 3fi0E-6d0pA:
undetectable
3fi0E-6d0pA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3FZG_A_SAMA300_0
(16S RRNA METHYLASE)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
5 / 12 HIS A  79
THR A  78
GLY A  85
GLY A  87
VAL A 103
None
1.29A 3fzgA-6d0pA:
undetectable
3fzgA-6d0pA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NVK_I_SAMI228_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
5 / 12 GLY A 172
ALA A 174
THR A 176
ALA A 170
VAL A 162
None
1.10A 3nvkI-6d0pA:
undetectable
3nvkI-6d0pA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PFG_A_SAMA264_0
(N-METHYLTRANSFERASE)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
5 / 12 ALA A  99
GLY A  65
MET A 135
MET A  97
PHE A 263
None
1.39A 3pfgA-6d0pA:
undetectable
3pfgA-6d0pA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ACA_C_DXCC1475_0
(TRANSLATION
ELONGATION FACTOR
SELB)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
4 / 8 ILE A 148
ASP A 147
ILE A 143
VAL A  69
None
0.81A 4acaC-6d0pA:
undetectable
4acaC-6d0pA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ACB_C_DXCC1475_0
(TRANSLATION
ELONGATION FACTOR
SELB)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
4 / 8 ILE A 148
ASP A 147
ILE A 143
VAL A  69
None
0.79A 4acbC-6d0pA:
undetectable
4acbC-6d0pA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4G1B_B_ECNB403_1
(FLAVOHEMOGLOBIN)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
5 / 11 ILE A  71
GLN A 141
ALA A 174
VAL A 182
LEU A 125
None
1.12A 4g1bB-6d0pA:
undetectable
4g1bB-6d0pA:
9.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KT0_A_PQNA2001_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1
PHOTOSYSTEM I
REACTION CENTER
SUBUNIT IX)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
5 / 11 PHE A 120
GLY A 118
GLY A  75
ILE A 286
LEU A 104
None
1.12A 4kt0A-6d0pA:
undetectable
4kt0J-6d0pA:
undetectable
4kt0A-6d0pA:
7.77
4kt0J-6d0pA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L78_A_ACTA1327_0
(PHOSPHORIBOSYLFORMYL
GLYCINAMIDINE
SYNTHASE)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
4 / 4 VAL A  77
THR A  78
GLU A 107
GLU A 106
None
None
MN  A 303 ( 2.9A)
MG  A 301 ( 4.0A)
1.40A 4l78A-6d0pA:
undetectable
4l78A-6d0pA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4WRY_A_URFA302_1
(URACIL-DNA
GLYCOSYLASE)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
4 / 8 GLY A  57
GLN A  56
PHE A  20
HIS A 109
None
None
PEG  A 304 ( 4.2A)
None
0.87A 4wryA-6d0pA:
undetectable
4wryA-6d0pA:
18.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4WRZ_A_URFA302_1
(URACIL-DNA
GLYCOSYLASE)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
4 / 8 GLY A  57
GLN A  56
PHE A  20
HIS A 109
None
None
PEG  A 304 ( 4.2A)
None
0.86A 4wrzA-6d0pA:
undetectable
4wrzA-6d0pA:
18.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XIW_B_AZMB402_1
(CARBONIC ANHYDRASE,
ALPHA TYPE)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
5 / 12 HIS A 105
GLU A 107
HIS A  61
THR A  68
VAL A 264
MN  A 303 (-3.4A)
MN  A 303 ( 2.9A)
MN  A 303 ( 3.3A)
MN  A 303 ( 4.9A)
None
1.03A 4xiwB-6d0pA:
undetectable
4xiwE-6d0pA:
undetectable
4xiwB-6d0pA:
15.90
4xiwE-6d0pA:
15.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IEN_A_VDYA201_2
(CDL2.2)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
5 / 12 PRO A 198
LEU A 237
LEU A 160
PRO A 149
LEU A 228
None
0.97A 5ienA-6d0pA:
undetectable
5ienA-6d0pA:
20.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5O96_H_SAMH501_0
(RIBOSOMAL RNA SMALL
SUBUNIT
METHYLTRANSFERASE E)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
5 / 10 LEU A 208
GLY A 222
LEU A 246
VAL A 205
THR A 224
None
1.02A 5o96G-6d0pA:
undetectable
5o96H-6d0pA:
undetectable
5o96G-6d0pA:
undetectable
5o96H-6d0pA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OHH_A_ACTA307_0
(CARBONIC ANHYDRASE
13)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
4 / 5 HIS A  61
HIS A  63
VAL A 103
THR A  68
MN  A 303 ( 3.3A)
MN  A 303 (-3.4A)
None
MN  A 303 ( 4.9A)
1.36A 5ohhA-6d0pA:
undetectable
5ohhA-6d0pA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZRD_A_CUA607_0
(TYROSINASE)
6d0p PIRIN FAMILY PROTEIN
(Acinetobacter
baumannii)
3 / 3 HIS A  61
HIS A 105
HIS A  63
MN  A 303 ( 3.3A)
MN  A 303 (-3.4A)
MN  A 303 (-3.4A)
0.52A 5zrdA-6d0pA:
undetectable
5zrdA-6d0pA:
undetectable