******************************************************* user.XUMS ************************************************************** TRANSFORM 1.0000 0.0000 0.0000 -0.0000 1.0000 -0.0000 -0.0000 0.0000 1.0000 0.000 0.000 0.000 Match found in 3tu8_o00 BURKHOLDERIA LETHAL FACTOR 1 (BLF1) Pattern 3tu8_o00 Query structure RMSD= 0.00 A No. of residues = 3 ------- ------- --------------- A 88 THR matches A 88 THR A 94 CYH matches A 94 CYH A 106 HIS matches A 106 HIS TRANSFORM 0.3031 0.9483 -0.0939 -0.4562 0.2309 0.8594 0.8367 -0.2177 0.5026 7.160 12.188 -70.920 Match found in 2f9z_c01 PROTEIN (CHEMOTAXIS METHYLATION PROT Pattern 2f9z_c01 Query structure RMSD= 0.49 A No. of residues = 3 ------- ------- --------------- D 21 THR matches A 88 THR D 27 CYH matches A 94 CYH D 44 HIS matches A 106 HIS TRANSFORM 0.2492 -0.6873 -0.6823 -0.5306 -0.6863 0.4975 -0.8102 0.2380 -0.5357 28.065 26.527 17.240 Match found in 2f9z_c00 PROTEIN (CHEMOTAXIS METHYLATION PROT Pattern 2f9z_c00 Query structure RMSD= 0.54 A No. of residues = 3 ------- ------- --------------- C 21 THR matches A 88 THR C 27 CYH matches A 94 CYH C 44 HIS matches A 106 HIS TRANSFORM -0.1413 -0.4007 0.9053 0.4605 0.7828 0.4184 -0.8763 0.4760 0.0739 105.858 -34.274 55.324 Match found in 5c4j_d01 beta_and_beta-prime_subunits_of_DNA_ Pattern 5c4j_d01 Query structure RMSD= 0.78 A No. of residues = 3 ------- ------- --------------- A 315 LEU matches A 27 LEU A 317 LYS matches A 30 LYS A 318 SER matches A 31 SER TRANSFORM 0.3674 -0.9140 0.1719 -0.0810 -0.2156 -0.9731 0.9265 0.3436 -0.1532 53.773 49.995 83.209 Match found in 7xx7_d01 CRYSTAL STRUCTURE OF NUCLEOSOME-H1X Pattern 7xx7_d01 Query structure RMSD= 0.86 A No. of residues = 3 ------- ------- --------------- D 17 ALA matches A 138 ALA D 18 VAL matches A 137 VAL D 19 THR matches A 205 THR TRANSFORM 0.4191 0.7654 0.4884 0.8727 -0.1911 -0.4494 -0.2506 0.6145 -0.7480 95.848 126.620 197.126 Match found in 7eqg_d05 STRUCTURE OF CSY-ACRIF5 organism=PS Pattern 7eqg_d05 Query structure RMSD= 0.86 A No. of residues = 3 ------- ------- --------------- H 11 VAL matches A 96 VAL H 13 ALA matches A 98 ALA H 335 VAL matches A 104 VAL TRANSFORM 0.1782 0.3322 -0.9262 -0.4646 0.8582 0.2184 0.8674 0.3914 0.3072 32.224 26.957 39.575 Match found in 6kql_d04 Sigma2_domain_of_RNA_polymerase_sigm Pattern 6kql_d04 Query structure RMSD= 0.86 A No. of residues = 3 ------- ------- --------------- F 321 ILE matches A 48 ILE F 324 GLU matches A 57 GLU F 332 PHE matches A 87 PHE TRANSFORM 0.0964 -0.9917 0.0847 -0.8013 -0.1278 -0.5845 0.5905 -0.0115 -0.8070 25.923 -36.789 -125.589 Match found in 1xny_c00 PROPIONYL-COA CARBOXYLASE COMPLEX B Pattern 1xny_c00 Query structure RMSD= 0.87 A No. of residues = 3 ------- ------- --------------- A 183 GLY matches A 101 GLY B 419 GLY matches A 99 GLY B 420 ALA matches A 98 ALA TRANSFORM -0.0206 0.9922 0.1227 -0.7615 0.0639 -0.6450 -0.6478 -0.1068 0.7543 50.277 28.698 35.646 Match found in 1q6l_c05 3-KETO-L-GULONATE 6-PHOSPHATE DECARB Pattern 1q6l_c05 Query structure RMSD= 0.90 A No. of residues = 3 ------- ------- --------------- A 67 ASP matches A 108 ASP A 68 ALA matches A 109 ALA A 72 LEU matches A 149 LEU TRANSFORM 0.5692 0.3675 -0.7355 0.6045 -0.7934 0.0713 -0.5574 -0.4851 -0.6738 162.297 117.460 204.072 Match found in 7z9m_d00 Type_II_DNA_topoisomerase Pattern 7z9m_d00 Query structure RMSD= 0.91 A No. of residues = 3 ------- ------- --------------- C 32 ARG matches A 10 ARG C 84 ALA matches A 12 ALA C 174 ILE matches A 61 ILE TRANSFORM 0.5771 0.1620 0.8004 0.0017 0.9799 -0.1996 -0.8166 0.1166 0.5652 10.637 -100.971 -122.990 Match found in 1xny_c01 PROPIONYL-COA CARBOXYLASE COMPLEX B Pattern 1xny_c01 Query structure RMSD= 0.91 A No. of residues = 3 ------- ------- --------------- A 420 ALA matches A 98 ALA B 182 GLY matches A 101 GLY B 183 GLY matches A 102 GLY TRANSFORM 0.5820 0.3357 -0.7407 0.5973 -0.7945 0.1092 -0.5518 -0.5060 -0.6629 161.575 116.695 203.608 Match found in 7z9k_d01 Type_II_DNA_topoisomerase Pattern 7z9k_d01 Query structure RMSD= 0.95 A No. of residues = 3 ------- ------- --------------- C 32 ARG matches A 10 ARG C 84 ALA matches A 12 ALA C 174 ILE matches A 61 ILE TRANSFORM 0.1199 0.5372 -0.8349 0.9847 0.0425 0.1688 0.1262 -0.8424 -0.5239 23.327 -47.125 -5.980 Match found in 1qrz_c22 PLASMINOGEN Pattern 1qrz_c22 Query structure RMSD= 0.97 A No. of residues = 3 ------- ------- --------------- C 603 HIS matches A 40 HIS C 646 ASP matches A 24 ASP C 739 GLY matches A 44 GLY TRANSFORM -0.9886 -0.0377 -0.1461 -0.1379 -0.1661 0.9764 -0.0611 0.9854 0.1590 67.691 -65.919 -127.546 Match found in 1xny_c00 PROPIONYL-COA CARBOXYLASE COMPLEX B Pattern 1xny_c00 Query structure RMSD= 0.99 A No. of residues = 3 ------- ------- --------------- A 183 GLY matches A 170 GLY B 419 GLY matches A 165 GLY B 420 ALA matches A 143 ALA TRANSFORM -0.1123 0.9666 0.2304 -0.9744 -0.0617 -0.2161 -0.1947 -0.2487 0.9488 -26.611 40.827 -18.562 Match found in 1qrz_c21 PLASMINOGEN Pattern 1qrz_c21 Query structure RMSD= 1.00 A No. of residues = 3 ------- ------- --------------- B 603 HIS matches A 40 HIS B 646 ASP matches A 24 ASP B 739 GLY matches A 44 GLY TRANSFORM 0.1870 -0.3702 -0.9099 0.5037 0.8314 -0.2347 0.8434 -0.4145 0.3419 85.732 47.831 58.448 Match found in 1f6d_c02 UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE Pattern 1f6d_c02 Query structure RMSD= 1.02 A No. of residues = 3 ------- ------- --------------- C 95 ASP matches A 128 ASP C 117 GLU matches A 130 GLU C 131 GLU matches A 124 GLU TRANSFORM -0.1452 -0.8614 -0.4868 -0.4577 0.4947 -0.7388 0.8772 0.1156 -0.4660 41.184 -45.100 -139.462 Match found in 1xny_c00 PROPIONYL-COA CARBOXYLASE COMPLEX B Pattern 1xny_c00 Query structure RMSD= 1.03 A No. of residues = 3 ------- ------- --------------- A 183 GLY matches A 102 GLY B 419 GLY matches A 99 GLY B 420 ALA matches A 98 ALA TRANSFORM 0.7940 0.5651 -0.2241 -0.3220 0.7036 0.6335 0.5157 -0.4308 0.7406 -2.698 -27.831 -72.869 Match found in 1tz3_c03 PUTATIVE SUGAR KINASE Pattern 1tz3_c03 Query structure RMSD= 1.03 A No. of residues = 3 ------- ------- --------------- B 250 ALA matches A 98 ALA B 251 GLY matches A 99 GLY B 252 ASP matches A 100 ASP TRANSFORM -0.7409 0.0954 -0.6648 -0.6164 0.2965 0.7295 0.2667 0.9503 -0.1608 174.649 20.537 -11.947 Match found in 1lij_c01 ADENOSINE KINASE Pattern 1lij_c01 Query structure RMSD= 1.04 A No. of residues = 3 ------- ------- --------------- A 316 ALA matches A 98 ALA A 317 GLY matches A 99 GLY A 318 ASP matches A 100 ASP TRANSFORM -0.0648 0.9648 0.2547 -0.9877 -0.0256 -0.1544 -0.1425 -0.2616 0.9546 -1.166 41.120 17.405 Match found in 1qrz_c20 PLASMINOGEN Pattern 1qrz_c20 Query structure RMSD= 1.06 A No. of residues = 3 ------- ------- --------------- A 603 HIS matches A 40 HIS A 646 ASP matches A 24 ASP A 739 GLY matches A 44 GLY TRANSFORM 0.2941 -0.3806 -0.8768 -0.7176 -0.6939 0.0605 -0.6314 0.6113 -0.4771 35.678 4.083 18.382 Match found in 1tz3_c02 PUTATIVE SUGAR KINASE Pattern 1tz3_c02 Query structure RMSD= 1.06 A No. of residues = 3 ------- ------- --------------- A 250 ALA matches A 98 ALA A 251 GLY matches A 99 GLY A 252 ASP matches A 100 ASP TRANSFORM 0.6038 -0.7899 -0.1073 -0.7955 -0.6057 -0.0176 -0.0511 0.0960 -0.9941 111.403 157.331 192.301 Match found in 8k28_d03 ICP1 CSY-DSDNA COMPLEX (FORM 1) Pattern 8k28_d03 Query structure RMSD= 1.06 A No. of residues = 3 ------- ------- --------------- D 9 VAL matches A 96 VAL D 11 ALA matches A 98 ALA D 300 VAL matches A 104 VAL TRANSFORM 0.4777 -0.6901 -0.5436 0.5625 -0.2350 0.7927 -0.6748 -0.6845 0.2759 -17.922 -10.527 55.461 Match found in 7yul_d00 CRYSTAL STRUCTURE OF HUMAN BEND6 BEN Pattern 7yul_d00 Query structure RMSD= 1.07 A No. of residues = 3 ------- ------- --------------- A 216 SER matches A 193 SER A 217 SER matches A 194 SER A 218 THR matches A 192 THR TRANSFORM 0.1664 0.5517 -0.8173 0.9733 0.0410 0.2258 0.1581 -0.8331 -0.5301 -32.467 -47.392 31.346 Match found in 1qrz_c23 PLASMINOGEN Pattern 1qrz_c23 Query structure RMSD= 1.08 A No. of residues = 3 ------- ------- --------------- D 603 HIS matches A 40 HIS D 646 ASP matches A 24 ASP D 739 GLY matches A 44 GLY TRANSFORM -0.6488 0.2895 0.7037 0.5762 -0.4171 0.7029 0.4970 0.8615 0.1038 29.319 53.236 16.211 Match found in 1qho_c07 ALPHA-AMYLASE Pattern 1qho_c07 Query structure RMSD= 1.09 A No. of residues = 3 ------- ------- --------------- A 228 ASP matches A 123 ASP A 260 ASP matches A 100 ASP A 329 ASP matches A 128 ASP TRANSFORM -0.9153 0.2766 -0.2928 0.3651 0.2625 -0.8932 -0.1702 -0.9244 -0.3413 180.495 4.870 9.626 Match found in 1lij_c01 ADENOSINE KINASE Pattern 1lij_c01 Query structure RMSD= 1.10 A No. of residues = 3 ------- ------- --------------- A 316 ALA matches A 143 ALA A 317 GLY matches A 144 GLY A 318 ASP matches A 167 ASP TRANSFORM 0.5990 0.1479 0.7870 0.7890 -0.2766 -0.5486 0.1365 0.9495 -0.2824 19.407 31.336 44.210 Match found in 1grc_c02 GLYCINAMIDE RIBONUCLEOTIDE TRANSFORM Pattern 1grc_c02 Query structure RMSD= 1.11 A No. of residues = 3 ------- ------- --------------- A 106 ASN matches A 54 ASN A 108 HIS matches A 40 HIS A 144 ASP matches A 51 ASP TRANSFORM 0.8513 -0.4379 0.2892 0.4515 0.8920 0.0217 -0.2675 0.1120 0.9570 121.198 119.868 149.230 Match found in 7py6_d01 CRYOEM STRUCTURE OF E.COLI RNA POLYM Pattern 7py6_d01 Query structure RMSD= 1.11 A No. of residues = 3 ------- ------- --------------- D 426 ALA matches A 159 ALA D 790 THR matches A 163 THR D 791 ALA matches A 143 ALA TRANSFORM 0.8513 -0.4379 0.2892 0.4515 0.8920 0.0217 -0.2675 0.1120 0.9570 121.198 119.868 149.230 Match found in 7py6_d02 beta_and_beta-prime_subunits_of_DNA_ Pattern 7py6_d02 Query structure RMSD= 1.11 A No. of residues = 3 ------- ------- --------------- D 426 ALA matches A 159 ALA D 790 THR matches A 163 THR D 791 ALA matches A 143 ALA TRANSFORM -0.0710 -0.5972 -0.7989 0.8717 0.3522 -0.3407 0.4848 -0.7206 0.4956 -1.682 -58.241 -71.629 Match found in 5bs3_d01 Type_II_DNA_topoisomerase Pattern 5bs3_d01 Query structure RMSD= 1.11 A No. of residues = 3 ------- ------- --------------- B1085 SER matches A 4 SER B1088 GLU matches A 6 GLU B1092 ARG matches A 10 ARG TRANSFORM 0.0444 -0.9590 0.2799 0.3415 -0.2487 -0.9064 0.9388 0.1359 0.3165 19.475 -31.761 -88.146 Match found in 1tz3_c03 PUTATIVE SUGAR KINASE Pattern 1tz3_c03 Query structure RMSD= 1.12 A No. of residues = 3 ------- ------- --------------- B 250 ALA matches A 143 ALA B 251 GLY matches A 144 GLY B 252 ASP matches A 167 ASP TRANSFORM 0.2129 0.8785 0.4276 -0.9757 0.2142 0.0458 -0.0513 -0.4270 0.9028 -17.804 -2.518 -56.198 Match found in 3kqu_d02 P-loop_containing_nucleoside_triphos Pattern 3kqu_d02 Query structure RMSD= 1.13 A No. of residues = 3 ------- ------- --------------- B 412 ASP matches A 83 ASP B 432 VAL matches A 178 VAL B 434 GLN matches A 183 GLN TRANSFORM -0.6166 -0.0218 0.7870 -0.1463 0.9854 -0.0873 -0.7735 -0.1689 -0.6108 49.115 -16.124 30.418 Match found in 1tz3_c02 PUTATIVE SUGAR KINASE Pattern 1tz3_c02 Query structure RMSD= 1.13 A No. of residues = 3 ------- ------- --------------- A 250 ALA matches A 143 ALA A 251 GLY matches A 144 GLY A 252 ASP matches A 167 ASP TRANSFORM -0.7200 -0.6239 -0.3038 0.1907 0.2430 -0.9511 0.6673 -0.7427 -0.0560 65.538 79.900 -16.522 Match found in 4wqs_d00 THERMUS THERMOPHILUS RNA POLYMERASE Pattern 4wqs_d00 Query structure RMSD= 1.14 A No. of residues = 3 ------- ------- --------------- C 422 ARG matches A 142 ARG C 423 ALA matches A 143 ALA D1093 TYR matches A 90 TYR TRANSFORM -0.2579 0.7888 -0.5579 0.9011 -0.0119 -0.4334 -0.3485 -0.6145 -0.7077 236.369 217.695 289.758 Match found in 8tvy_d04 P-loop_containing_nucleoside_triphos Pattern 8tvy_d04 Query structure RMSD= 1.14 A No. of residues = 3 ------- ------- --------------- M 478 ASP matches A 123 ASP M 479 SER matches A 122 SER M 480 GLU matches A 127 GLU TRANSFORM -0.2579 0.7888 -0.5579 0.9011 -0.0119 -0.4334 -0.3485 -0.6145 -0.7077 236.369 217.695 289.758 Match found in 8tvy_d02 P-loop_containing_nucleoside_triphos Pattern 8tvy_d02 Query structure RMSD= 1.14 A No. of residues = 3 ------- ------- --------------- M 478 ASP matches A 123 ASP M 479 SER matches A 122 SER M 480 GLU matches A 127 GLU TRANSFORM -0.3144 0.0015 -0.9493 -0.5751 -0.7959 0.1892 -0.7553 0.6054 0.2511 25.788 66.309 21.326 Match found in 3ugm_d01 Thiolase-like Pattern 3ugm_d01 Query structure RMSD= 1.15 A No. of residues = 3 ------- ------- --------------- A 538 ASP matches A 51 ASP A 572 ASP matches A 49 ASP A 606 ILE matches A 48 ILE TRANSFORM 0.3609 -0.3410 0.8680 -0.9142 -0.3132 0.2570 0.1842 -0.8864 -0.4248 3.761 38.324 26.506 Match found in 2gb7_d01 Restriction_endonuclease-like Pattern 2gb7_d01 Query structure RMSD= 1.16 A No. of residues = 3 ------- ------- --------------- A 114 GLN matches A 182 GLN A 117 ARG matches A 181 ARG A 118 SER matches A 80 SER TRANSFORM 0.9210 0.3889 -0.0227 -0.1212 0.3414 0.9321 0.3702 -0.8557 0.3615 -3.484 71.117 127.969 Match found in 5fhd_d01 P-loop_containing_nucleoside_triphos Pattern 5fhd_d01 Query structure RMSD= 1.17 A No. of residues = 3 ------- ------- --------------- A 91 TYR matches A 89 TYR A 290 SER matches A 92 SER A 291 LEU matches A 91 LEU TRANSFORM 0.6971 0.0109 -0.7169 -0.3112 -0.8962 -0.3163 -0.6459 0.4436 -0.6213 23.284 51.762 51.751 Match found in 2fvq_d00 DNA/RNA_polymerases Pattern 2fvq_d00 Query structure RMSD= 1.18 A No. of residues = 3 ------- ------- --------------- A 64 TYR matches A 89 TYR A 99 LEU matches A 27 LEU A 116 ARG matches A 47 ARG TRANSFORM 0.8123 0.0205 0.5829 0.5780 0.1055 -0.8092 -0.0781 0.9942 0.0738 -34.360 -20.763 -0.880 Match found in 1be1_c02 GLUTAMATE MUTASE Pattern 1be1_c02 Query structure RMSD= 1.18 A No. of residues = 3 ------- ------- --------------- 14 ASP matches A 108 ASP 16 HIS matches A 106 HIS 67 GLY matches A 195 GLY TRANSFORM -0.2947 0.9455 0.1384 0.1441 0.1872 -0.9717 -0.9447 -0.2664 -0.1914 -10.894 -2.742 2.519 Match found in 5hp4_d02 PIN_domain-like Pattern 5hp4_d02 Query structure RMSD= 1.18 A No. of residues = 3 ------- ------- --------------- A 54 LEU matches A 152 LEU A 58 TYR matches A 155 TYR A 172 ARG matches A 119 ARG TRANSFORM 0.0122 -0.7915 -0.6110 0.9348 -0.2079 0.2880 -0.3550 -0.5747 0.7374 231.456 216.883 161.643 Match found in 7zwc_d02 STRUCTURE OF SNAPC:TBP-TFIIA-TFIIB S Pattern 7zwc_d02 Query structure RMSD= 1.18 A No. of residues = 3 ------- ------- --------------- M 283 VAL matches A 131 VAL M 284 THR matches A 133 THR M 287 GLN matches A 208 GLN TRANSFORM 0.7225 0.0596 -0.6888 -0.2644 -0.8968 -0.3549 -0.6388 0.4385 -0.6322 22.478 50.843 51.685 Match found in 2fvs_d00 DNA/RNA_polymerases Pattern 2fvs_d00 Query structure RMSD= 1.20 A No. of residues = 3 ------- ------- --------------- A 64 TYR matches A 89 TYR A 99 LEU matches A 27 LEU A 116 ARG matches A 47 ARG TRANSFORM -0.3203 -0.8737 0.3662 -0.6106 0.4860 0.6253 -0.7242 -0.0234 -0.6892 32.576 -9.280 48.244 Match found in 4kb1_d00 Ribonuclease_H-like Pattern 4kb1_d00 Query structure RMSD= 1.21 A No. of residues = 3 ------- ------- --------------- B 29 PHE matches A 116 PHE B 71 GLN matches A 115 GLN B 73 GLU matches A 112 GLU TRANSFORM -0.3700 0.2993 0.8795 -0.9217 0.0000 -0.3878 -0.1161 -0.9542 0.2758 -22.842 66.166 17.170 Match found in 3v4i_d01 DNA/RNA_polymerases Pattern 3v4i_d01 Query structure RMSD= 1.22 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 87 PHE A 63 ILE matches A 61 ILE A 74 LEU matches A 85 LEU TRANSFORM -0.3700 0.2993 0.8795 -0.9217 0.0000 -0.3878 -0.1161 -0.9542 0.2758 -22.842 66.166 17.170 Match found in 3v4i_d00 DNA/RNA_polymerases Pattern 3v4i_d00 Query structure RMSD= 1.22 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 87 PHE A 63 ILE matches A 61 ILE A 74 LEU matches A 85 LEU TRANSFORM -0.5782 -0.1297 -0.8056 -0.6643 -0.4984 0.5570 -0.4737 0.8572 0.2020 164.545 139.372 147.293 Match found in 7f75_d11 Sigma2_domain_of_RNA_polymerase_sigm Pattern 7f75_d11 Query structure RMSD= 1.23 A No. of residues = 3 ------- ------- --------------- F 270 ILE matches A 48 ILE F 278 LEU matches A 27 LEU F 281 PHE matches A 23 PHE TRANSFORM -0.3210 0.2793 0.9050 -0.9200 -0.3189 -0.2279 0.2249 -0.9057 0.3593 204.791 229.006 216.807 Match found in 7khb_d06 ESCHERICHIA COLI RNA POLYMERASE AND Pattern 7khb_d06 Query structure RMSD= 1.23 A No. of residues = 3 ------- ------- --------------- C 470 ARG matches A 119 ARG C 504 GLU matches A 112 GLU C 508 SER matches A 148 SER TRANSFORM -0.0374 -0.5673 -0.8226 0.8397 0.4284 -0.3337 0.5418 -0.7033 0.4604 23.299 -11.726 8.153 Match found in 2odj_o00 PORIN D Pattern 2odj_o00 Query structure RMSD= 1.24 A No. of residues = 3 ------- ------- --------------- A 156 HIS matches A 141 HIS A 208 ASP matches A 167 ASP A 296 SER matches A 17 SER TRANSFORM 0.7532 0.6511 0.0933 0.2579 -0.4228 0.8687 0.6051 -0.6303 -0.4864 180.462 169.764 190.788 Match found in 8btg_d03 P-loop_containing_nucleoside_triphos Pattern 8btg_d03 Query structure RMSD= 1.25 A No. of residues = 3 ------- ------- --------------- C 431 ASP matches A 108 ASP C 432 GLU matches A 70 GLU C 433 GLN matches A 68 GLN TRANSFORM 0.0063 -0.9950 -0.0999 0.9114 0.0469 -0.4089 0.4115 -0.0885 0.9071 -9.044 -27.564 -53.398 Match found in 7z4d_d01 CRYSTAL STRUCTURE OF SPCAS9 BOUND TO Pattern 7z4d_d01 Query structure RMSD= 1.25 A No. of residues = 3 ------- ------- --------------- E 450 TYR matches A 139 TYR E 491 PHE matches A 97 PHE E 495 MET matches A 126 MET TRANSFORM 0.6430 -0.5682 -0.5136 0.2938 -0.4363 0.8505 -0.7073 -0.6977 -0.1136 184.172 145.362 212.937 Match found in 8ozd_d02 Toll/Interleukin_receptor_TIR_domain Pattern 8ozd_d02 Query structure RMSD= 1.25 A No. of residues = 3 ------- ------- --------------- D 245 PHE matches A 116 PHE D 248 ILE matches A 107 ILE D 251 HIS matches A 106 HIS TRANSFORM 0.7667 0.4927 -0.4116 -0.1511 -0.4846 -0.8616 -0.6240 0.7228 -0.2971 166.260 245.996 280.424 Match found in 7xg0_d07 CRYOEM STRUCTURE OF TYPE IV-A CSF-CR Pattern 7xg0_d07 Query structure RMSD= 1.25 A No. of residues = 3 ------- ------- --------------- H 106 ARG matches A 47 ARG H 228 ASP matches A 51 ASP H 229 LEU matches A 50 LEU TRANSFORM 0.9403 0.3133 -0.1332 0.0648 0.2194 0.9735 0.3343 -0.9240 0.1860 -30.135 4.701 67.439 Match found in 6kqm_d03 THERMUS THERMOPHILUS INITIAL TRANSCR Pattern 6kqm_d03 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- D 628 ARG matches A 142 ARG D 705 ALA matches A 109 ALA D 706 PRO matches A 110 PRO TRANSFORM -0.3799 0.2589 0.8881 -0.9233 -0.0468 -0.3813 -0.0571 -0.9648 0.2568 -5.728 67.126 137.897 Match found in 7lri_d01 DNA/RNA_polymerases Pattern 7lri_d01 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 87 PHE A 63 ILE matches A 61 ILE A 74 LEU matches A 85 LEU TRANSFORM -0.1066 0.9076 0.4060 -0.6650 -0.3686 0.6495 0.7392 -0.2008 0.6429 -12.177 -32.790 14.389 Match found in 3epg_d00 DNA/RNA_polymerases Pattern 3epg_d00 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- A 305 GLU matches A 127 GLU A 343 ARG matches A 118 ARG A 361 GLN matches A 115 GLN TRANSFORM -0.6651 0.5496 0.5056 -0.3162 0.4060 -0.8574 -0.6765 -0.7301 -0.0963 180.902 219.784 211.647 Match found in 8ozd_d01 Ribonuclease_H-like Pattern 8ozd_d01 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- B 245 PHE matches A 116 PHE B 248 ILE matches A 107 ILE B 251 HIS matches A 106 HIS TRANSFORM -0.6651 0.5496 0.5056 -0.3162 0.4060 -0.8574 -0.6765 -0.7301 -0.0963 180.902 219.784 211.647 Match found in 8ozd_d00 Toll/Interleukin_receptor_TIR_domain Pattern 8ozd_d00 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- B 245 PHE matches A 116 PHE B 248 ILE matches A 107 ILE B 251 HIS matches A 106 HIS TRANSFORM 0.2177 -0.4181 -0.8819 -0.8904 -0.4552 -0.0040 -0.3998 0.7861 -0.4713 -10.375 51.052 113.710 Match found in 5tkz_d03 RNA-binding_domain,_RBD Pattern 5tkz_d03 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- A 61 LEU matches A 64 LEU A 116 LYS matches A 95 LYS A 117 VAL matches A 96 VAL TRANSFORM -0.4287 0.1032 -0.8975 -0.2707 -0.9625 0.0187 -0.8619 0.2510 0.4406 163.245 164.042 184.756 Match found in 7n4e_d05 ESCHERICHIA COLI SIGMA 70-DEPENDENT Pattern 7n4e_d05 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- C 183 TRP matches A 125 TRP C 199 ASP matches A 128 ASP C 200 ARG matches A 209 ARG TRANSFORM 0.8679 0.1207 0.4818 0.3853 -0.7759 -0.4996 0.3135 0.6193 -0.7199 -0.862 -22.989 25.404 Match found in 4enk_d00 Methylated_DNA-protein_cysteine_meth Pattern 4enk_d00 Query structure RMSD= 1.27 A No. of residues = 3 ------- ------- --------------- A 39 ARG matches A 181 ARG A 40 GLN matches A 183 GLN A 43 GLN matches A 182 GLN TRANSFORM 0.5915 0.6435 0.4859 0.7340 -0.6791 0.0058 0.3337 0.3533 -0.8740 -25.130 -14.259 22.680 Match found in 7yul_d00 CRYSTAL STRUCTURE OF HUMAN BEND6 BEN Pattern 7yul_d00 Query structure RMSD= 1.27 A No. of residues = 3 ------- ------- --------------- A 216 SER matches A 197 SER A 217 SER matches A 196 SER A 218 THR matches A 191 THR TRANSFORM -0.1641 -0.9822 -0.0910 -0.4979 0.0029 0.8672 -0.8515 0.1876 -0.4896 -35.350 -57.704 22.481 Match found in 3v4i_d02 DNA/RNA_polymerases Pattern 3v4i_d02 Query structure RMSD= 1.27 A No. of residues = 3 ------- ------- --------------- C 61 PHE matches A 86 PHE C 63 ILE matches A 79 ILE C 74 LEU matches A 62 LEU TRANSFORM -0.3033 -0.3742 0.8763 0.5231 -0.8341 -0.1751 0.7965 0.4053 0.4488 -31.840 5.799 -3.114 Match found in 3v4i_d01 DNA/RNA_polymerases Pattern 3v4i_d01 Query structure RMSD= 1.27 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 87 PHE A 63 ILE matches A 9 ILE A 74 LEU matches A 85 LEU TRANSFORM -0.3033 -0.3742 0.8763 0.5231 -0.8341 -0.1751 0.7965 0.4053 0.4488 -31.840 5.799 -3.114 Match found in 3v4i_d00 DNA/RNA_polymerases Pattern 3v4i_d00 Query structure RMSD= 1.27 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 87 PHE A 63 ILE matches A 9 ILE A 74 LEU matches A 85 LEU TRANSFORM 0.0126 -0.9880 -0.1542 -0.9409 0.0405 -0.3363 0.3385 0.1493 -0.9291 33.535 40.086 9.769 Match found in 2i0q_d02 Nucleic_acid-binding_proteins Pattern 2i0q_d02 Query structure RMSD= 1.27 A No. of residues = 3 ------- ------- --------------- A 128 ARG matches A 209 ARG A 130 TYR matches A 155 TYR A 135 GLN matches A 211 GLN TRANSFORM 0.0126 -0.9880 -0.1542 -0.9409 0.0405 -0.3363 0.3385 0.1493 -0.9291 33.535 40.086 9.769 Match found in 2i0q_d06 Nucleic_acid-binding_proteins Pattern 2i0q_d06 Query structure RMSD= 1.27 A No. of residues = 3 ------- ------- --------------- A 128 ARG matches A 209 ARG A 130 TYR matches A 155 TYR A 135 GLN matches A 211 GLN TRANSFORM -0.2713 -0.3636 0.8912 0.5656 -0.8094 -0.1580 0.7788 0.4612 0.4253 -15.725 5.789 120.905 Match found in 7lri_d01 DNA/RNA_polymerases Pattern 7lri_d01 Query structure RMSD= 1.28 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 87 PHE A 63 ILE matches A 9 ILE A 74 LEU matches A 85 LEU TRANSFORM 0.2972 0.3705 0.8800 -0.8549 -0.3072 0.4180 0.4252 -0.8766 0.2254 -59.129 -36.886 -38.071 Match found in 3v4i_d02 DNA/RNA_polymerases Pattern 3v4i_d02 Query structure RMSD= 1.29 A No. of residues = 3 ------- ------- --------------- C 61 PHE matches A 87 PHE C 63 ILE matches A 61 ILE C 74 LEU matches A 85 LEU TRANSFORM 0.0960 0.7577 0.6455 -0.9800 -0.0415 0.1945 0.1741 -0.6513 0.7386 181.236 255.079 259.417 Match found in 8way_d01 beta_and_beta-prime_subunits_of_DNA_ Pattern 8way_d01 Query structure RMSD= 1.29 A No. of residues = 3 ------- ------- --------------- o 461 GLN matches A 11 GLN o 854 THR matches A 18 THR o 855 ALA matches A 198 ALA TRANSFORM -0.6696 0.3744 0.6415 -0.0336 0.8475 -0.5298 -0.7420 -0.3763 -0.5549 184.241 147.873 187.682 Match found in 7z9g_d00 Type_II_DNA_topoisomerase Pattern 7z9g_d00 Query structure RMSD= 1.29 A No. of residues = 3 ------- ------- --------------- A 82 ASP matches A 147 ASP A 83 SER matches A 148 SER A 119 ALA matches A 154 ALA TRANSFORM 0.1055 -0.9024 0.4177 0.2245 0.4308 0.8740 -0.9687 0.0016 0.2481 33.607 -125.070 -110.780 Match found in 1xny_c01 PROPIONYL-COA CARBOXYLASE COMPLEX B Pattern 1xny_c01 Query structure RMSD= 1.30 A No. of residues = 3 ------- ------- --------------- A 420 ALA matches A 138 ALA B 182 GLY matches A 102 GLY B 183 GLY matches A 99 GLY TRANSFORM -0.4396 0.8778 -0.1903 -0.5618 -0.1034 0.8208 0.7008 0.4677 0.5386 5.786 -1.132 36.333 Match found in 6kqm_d02 THERMUS THERMOPHILUS INITIAL TRANSCR Pattern 6kqm_d02 Query structure RMSD= 1.30 A No. of residues = 3 ------- ------- --------------- C 447 ALA matches A 159 ALA D1088 THR matches A 203 THR D1089 ALA matches A 138 ALA TRANSFORM -0.2417 0.2133 0.9466 -0.9703 -0.0454 -0.2376 -0.0077 -0.9759 0.2179 -15.297 60.173 138.011 Match found in 5i3u_d01 DNA/RNA_polymerases Pattern 5i3u_d01 Query structure RMSD= 1.31 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 87 PHE A 63 ILE matches A 61 ILE A 74 LEU matches A 85 LEU TRANSFORM -0.0911 -0.8175 0.5687 -0.1949 -0.5454 -0.8152 0.9766 -0.1851 -0.1096 136.230 161.240 109.369 Match found in 7z4g_d00 SPCAS9 BOUND TO 12-NUCLEOTIDE COMPLE Pattern 7z4g_d00 Query structure RMSD= 1.31 A No. of residues = 3 ------- ------- --------------- B 450 TYR matches A 139 TYR B 491 PHE matches A 97 PHE B 495 MET matches A 126 MET TRANSFORM -0.2065 0.5250 0.8257 0.0189 0.8458 -0.5331 -0.9783 -0.0945 -0.1846 42.626 7.286 35.730 Match found in 1f0v_d00 RNase_A-like Pattern 1f0v_d00 Query structure RMSD= 1.31 A No. of residues = 3 ------- ------- --------------- A 12 HIS matches A 106 HIS A 45 THR matches A 88 THR A 86 GLU matches A 22 GLU TRANSFORM -0.9796 0.1875 0.0720 0.0078 0.3939 -0.9191 -0.2007 -0.8998 -0.3874 122.466 160.965 130.468 Match found in 7wwv_d07 DNA BOUND-ICP1 CSY COMPLEX Pattern 7wwv_d07 Query structure RMSD= 1.32 A No. of residues = 3 ------- ------- --------------- F 9 VAL matches A 174 VAL F 94 LEU matches A 186 LEU F 300 VAL matches A 96 VAL TRANSFORM -0.1795 0.9541 0.2398 0.5931 0.2994 -0.7474 -0.7849 0.0080 -0.6196 -9.945 34.821 -12.520 Match found in 4fs1_d00 DNA/RNA_polymerases Pattern 4fs1_d00 Query structure RMSD= 1.32 A No. of residues = 3 ------- ------- --------------- A 305 GLU matches A 127 GLU A 343 ARG matches A 118 ARG A 361 GLN matches A 115 GLN TRANSFORM -0.5095 0.8472 0.1505 0.7435 0.3454 0.5726 0.4331 0.4037 -0.8059 172.451 81.385 155.876 Match found in 5w64_d02 RNA POLYMERASE I INITIAL TRANSCRIBIN Pattern 5w64_d02 Query structure RMSD= 1.33 A No. of residues = 3 ------- ------- --------------- A1013 THR matches A 18 THR A1014 SER matches A 17 SER A1018 TYR matches A 187 TYR TRANSFORM 0.1741 -0.9334 -0.3138 0.6110 0.3523 -0.7089 0.7723 -0.0683 0.6316 10.336 34.040 13.136 Match found in 4ebd_d00 DNA/RNA_polymerases Pattern 4ebd_d00 Query structure RMSD= 1.33 A No. of residues = 3 ------- ------- --------------- A 305 GLU matches A 127 GLU A 343 ARG matches A 118 ARG A 361 GLN matches A 115 GLN TRANSFORM -0.6195 -0.2048 -0.7578 -0.7398 -0.1705 0.6508 -0.2625 0.9638 -0.0460 -6.698 -47.510 1.889 Match found in 3v4i_d02 DNA/RNA_polymerases Pattern 3v4i_d02 Query structure RMSD= 1.33 A No. of residues = 3 ------- ------- --------------- C 61 PHE matches A 86 PHE C 63 ILE matches A 79 ILE C 74 LEU matches A 74 LEU TRANSFORM -0.5997 0.6436 -0.4756 0.6695 0.0781 -0.7387 -0.4382 -0.7614 -0.4777 200.152 232.274 206.749 Match found in 6x43_d02 MFD-BOUND E.COLI RNA POLYMERASE ELON Pattern 6x43_d02 Query structure RMSD= 1.34 A No. of residues = 3 ------- ------- --------------- I1041 ASP matches A 123 ASP I1044 PRO matches A 76 PRO J 259 ARG matches A 181 ARG TRANSFORM -0.6831 0.1678 0.7108 0.5539 -0.5153 0.6540 0.4760 0.8404 0.2590 -25.386 -90.479 -23.390 Match found in 3v4i_d02 DNA/RNA_polymerases Pattern 3v4i_d02 Query structure RMSD= 1.34 A No. of residues = 3 ------- ------- --------------- C 61 PHE matches A 87 PHE C 63 ILE matches A 9 ILE C 74 LEU matches A 85 LEU TRANSFORM 0.1543 -0.8978 0.4125 0.7240 -0.1814 -0.6656 0.6724 0.4013 0.6220 85.009 100.686 29.517 Match found in 6b44_d01 CRYO-EM STRUCTURE OF TYPE I-F CRISPR Pattern 6b44_d01 Query structure RMSD= 1.34 A No. of residues = 3 ------- ------- --------------- B 85 ARG matches A 209 ARG H 231 LEU matches A 156 LEU H 233 LEU matches A 152 LEU TRANSFORM -0.5494 -0.1198 0.8269 -0.1185 -0.9685 -0.2190 0.8271 -0.2183 0.5179 27.323 72.725 66.499 Match found in 1bd3_c03 URACIL PHOSPHORIBOSYLTRANSFERASE Pattern 1bd3_c03 Query structure RMSD= 1.34 A No. of residues = 3 ------- ------- --------------- B 137 ARG matches A 142 ARG B 141 THR matches A 192 THR B 235 ASP matches A 108 ASP TRANSFORM 0.3056 0.4886 -0.8173 -0.8635 0.5039 -0.0216 0.4012 0.7123 0.5758 191.036 233.352 184.946 Match found in 8w8f_d01 Translation_proteins_SH3-like_domain Pattern 8w8f_d01 Query structure RMSD= 1.35 A No. of residues = 3 ------- ------- --------------- A 854 THR matches A 163 THR A 855 ALA matches A 143 ALA B 492 ASP matches A 167 ASP TRANSFORM -0.2274 -0.8097 0.5409 -0.8152 0.4621 0.3491 -0.5327 -0.3616 -0.7652 226.934 257.648 263.067 Match found in 5vvr_d02 P-loop_containing_nucleoside_triphos Pattern 5vvr_d02 Query structure RMSD= 1.35 A No. of residues = 3 ------- ------- --------------- A 448 PRO matches A 201 PRO A 831 THR matches A 15 THR A 832 ALA matches A 12 ALA TRANSFORM 0.4150 0.6674 0.6183 -0.0892 0.7062 -0.7024 -0.9054 0.2363 0.3526 128.925 146.851 177.284 Match found in 7py6_d02 beta_and_beta-prime_subunits_of_DNA_ Pattern 7py6_d02 Query structure RMSD= 1.35 A No. of residues = 3 ------- ------- --------------- D 426 ALA matches A 113 ALA D 790 THR matches A 163 THR D 791 ALA matches A 143 ALA TRANSFORM 0.4150 0.6674 0.6183 -0.0892 0.7062 -0.7024 -0.9054 0.2363 0.3526 128.925 146.851 177.284 Match found in 7py6_d01 CRYOEM STRUCTURE OF E.COLI RNA POLYM Pattern 7py6_d01 Query structure RMSD= 1.35 A No. of residues = 3 ------- ------- --------------- D 426 ALA matches A 113 ALA D 790 THR matches A 163 THR D 791 ALA matches A 143 ALA TRANSFORM 0.2536 0.4986 -0.8289 -0.9024 0.4306 -0.0170 0.3485 0.7523 0.5591 192.039 237.513 185.757 Match found in 8w8e_d02 Translation_proteins_SH3-like_domain Pattern 8w8e_d02 Query structure RMSD= 1.35 A No. of residues = 3 ------- ------- --------------- A 854 THR matches A 163 THR A 855 ALA matches A 143 ALA B 492 ASP matches A 167 ASP TRANSFORM -0.0883 0.5831 -0.8076 0.9913 0.1310 -0.0137 0.0978 -0.8018 -0.5896 15.429 -50.194 74.860 Match found in 6kqm_d02 THERMUS THERMOPHILUS INITIAL TRANSCR Pattern 6kqm_d02 Query structure RMSD= 1.35 A No. of residues = 3 ------- ------- --------------- C 447 ALA matches A 190 ALA D1088 THR matches A 18 THR D1089 ALA matches A 198 ALA TRANSFORM -0.6933 -0.6475 -0.3163 0.7195 -0.5979 -0.3532 0.0396 -0.4725 0.8804 51.343 -61.644 26.127 Match found in 3rzd_d00 RNA POLYMERASE II INITIATION COMPLEX Pattern 3rzd_d00 Query structure RMSD= 1.36 A No. of residues = 3 ------- ------- --------------- A 448 PRO matches A 201 PRO A 831 THR matches A 15 THR A 832 ALA matches A 12 ALA TRANSFORM 0.0778 -0.9526 -0.2940 -0.0202 0.2933 -0.9558 0.9968 0.0803 0.0036 172.097 200.614 182.193 Match found in 6xh8_d05 cAMP-binding_domain-like Pattern 6xh8_d05 Query structure RMSD= 1.36 A No. of residues = 3 ------- ------- --------------- F 394 TYR matches A 139 TYR F 437 GLN matches A 145 GLN F 443 ILE matches A 107 ILE TRANSFORM 0.3065 0.9148 0.2630 -0.8692 0.3816 -0.3144 -0.3879 -0.1322 0.9122 79.881 70.312 8.583 Match found in 3x1l_d03 CRYSTAL STRUCTURE OF THE CRISPR-CAS Pattern 3x1l_d03 Query structure RMSD= 1.37 A No. of residues = 3 ------- ------- --------------- B 158 VAL matches A 178 VAL B 163 LEU matches A 85 LEU D 117 SER matches A 80 SER TRANSFORM 0.1820 -0.0300 -0.9828 -0.9592 0.2145 -0.1842 0.2164 0.9763 0.0103 139.768 162.825 138.688 Match found in 7u19_d00 RFC:PCNA BOUND TO NICKED DNA Pattern 7u19_d00 Query structure RMSD= 1.37 A No. of residues = 3 ------- ------- --------------- B 146 GLN matches A 145 GLN B 148 ASN matches A 168 ASN C 155 PRO matches A 161 PRO TRANSFORM 0.1921 -0.8465 0.4965 0.6799 0.4796 0.5547 -0.7077 0.2311 0.6677 116.640 291.643 71.561 Match found in 6dve_d01 Sigma2_domain_of_RNA_polymerase_sigm Pattern 6dve_d01 Query structure RMSD= 1.37 A No. of residues = 3 ------- ------- --------------- F 25 VAL matches A 82 VAL F 28 ARG matches A 10 ARG F 31 LEU matches A 85 LEU TRANSFORM -0.0849 -0.8521 -0.5165 0.4578 0.4270 -0.7798 0.8850 -0.3026 0.3539 136.071 158.919 124.662 Match found in 8k28_d04 ICP1 CSY-DSDNA COMPLEX (FORM 1) Pattern 8k28_d04 Query structure RMSD= 1.38 A No. of residues = 3 ------- ------- --------------- E 9 VAL matches A 174 VAL E 94 LEU matches A 186 LEU E 300 VAL matches A 96 VAL TRANSFORM -0.1241 0.0848 0.9886 -0.8857 -0.4587 -0.0719 0.4473 -0.8846 0.1321 -10.220 32.263 48.472 Match found in 6kqm_d02 THERMUS THERMOPHILUS INITIAL TRANSCR Pattern 6kqm_d02 Query structure RMSD= 1.38 A No. of residues = 3 ------- ------- --------------- C 447 ALA matches A 198 ALA D1088 THR matches A 191 THR D1089 ALA matches A 190 ALA TRANSFORM 0.1954 -0.4476 -0.8726 0.9776 0.1593 0.1372 0.0776 -0.8799 0.4687 -30.317 8.771 -29.980 Match found in 1ddj_c13 PLASMINOGEN Pattern 1ddj_c13 Query structure RMSD= 1.38 A No. of residues = 3 ------- ------- --------------- B 603 HIS matches A 106 HIS B 646 ASP matches A 108 ASP B 739 GLY matches A 170 GLY TRANSFORM 0.9510 -0.0824 0.2980 -0.1720 0.6597 0.7315 -0.2569 -0.7470 0.6132 -53.710 -1.128 19.793 Match found in 5ua2_d00 Homeodomain-like Pattern 5ua2_d00 Query structure RMSD= 1.38 A No. of residues = 3 ------- ------- --------------- A 61 ARG matches A 166 ARG A 70 ALA matches A 190 ALA A 73 THR matches A 191 THR TRANSFORM -0.5825 -0.5189 -0.6257 0.3629 -0.8548 0.3710 -0.7274 -0.0110 0.6862 166.969 106.527 151.664 Match found in 6m6c_d01 CRYOEM STRUCTURE OF THERMUS THERMOPH Pattern 6m6c_d01 Query structure RMSD= 1.38 A No. of residues = 3 ------- ------- --------------- D 706 PRO matches A 201 PRO D1088 THR matches A 15 THR D1089 ALA matches A 12 ALA TRANSFORM -0.5825 -0.5189 -0.6257 0.3629 -0.8548 0.3710 -0.7274 -0.0110 0.6862 166.969 106.527 151.664 Match found in 6m6c_d02 beta_and_beta-prime_subunits_of_DNA_ Pattern 6m6c_d02 Query structure RMSD= 1.38 A No. of residues = 3 ------- ------- --------------- D 706 PRO matches A 201 PRO D1088 THR matches A 15 THR D1089 ALA matches A 12 ALA TRANSFORM -0.1523 0.8994 -0.4096 0.9772 0.1990 0.0736 0.1477 -0.3891 -0.9093 195.863 120.673 159.931 Match found in 5ld2_d06 P-loop_containing_nucleoside_triphos Pattern 5ld2_d06 Query structure RMSD= 1.38 A No. of residues = 3 ------- ------- --------------- B 249 SER matches A 185 SER B 252 ILE matches A 177 ILE B 254 ARG matches A 10 ARG TRANSFORM -0.1523 0.8994 -0.4096 0.9772 0.1990 0.0736 0.1477 -0.3891 -0.9093 195.863 120.673 159.931 Match found in 5ld2_d00 P-loop_containing_nucleoside_triphos Pattern 5ld2_d00 Query structure RMSD= 1.38 A No. of residues = 3 ------- ------- --------------- B 249 SER matches A 185 SER B 252 ILE matches A 177 ILE B 254 ARG matches A 10 ARG TRANSFORM -0.0661 0.0133 0.9977 -0.7286 -0.6839 -0.0391 0.6818 -0.7295 0.0549 -8.073 3.545 -60.490 Match found in 4aqu_d02 Homing_endonucleases Pattern 4aqu_d02 Query structure RMSD= 1.39 A No. of residues = 3 ------- ------- --------------- A 22 SER matches A 4 SER A 139 LYS matches A 14 LYS A 140 THR matches A 15 THR TRANSFORM 0.1333 -0.0112 -0.9910 0.8383 0.5347 0.1067 0.5287 -0.8450 0.0807 -17.957 13.762 2.977 Match found in 1ddj_c15 PLASMINOGEN Pattern 1ddj_c15 Query structure RMSD= 1.39 A No. of residues = 3 ------- ------- --------------- D 603 HIS matches A 40 HIS D 646 ASP matches A 49 ASP D 739 GLY matches A 44 GLY TRANSFORM 0.0790 -0.9563 -0.2816 0.1847 -0.2636 0.9468 -0.9796 -0.1269 0.1558 43.683 -26.827 37.512 Match found in 6p4f_d00 CRYSTAL STRUCTURE OF THE XPB-BAX1-FO Pattern 6p4f_d00 Query structure RMSD= 1.39 A No. of residues = 3 ------- ------- --------------- B 9 PHE matches A 87 PHE B 11 ILE matches A 21 ILE B 233 LYS matches A 14 LYS TRANSFORM -0.5279 -0.7679 -0.3629 0.1999 0.3030 -0.9318 0.8255 -0.5644 -0.0064 35.946 80.152 28.939 Match found in 2i3p_d05 Homing_endonucleases Pattern 2i3p_d05 Query structure RMSD= 1.40 A No. of residues = 3 ------- ------- --------------- B 322 SER matches A 4 SER B 439 LYS matches A 14 LYS B 440 THR matches A 15 THR TRANSFORM -0.5279 -0.7679 -0.3629 0.1999 0.3030 -0.9318 0.8255 -0.5644 -0.0064 35.946 80.152 28.939 Match found in 2i3p_d03 Homing_endonucleases Pattern 2i3p_d03 Query structure RMSD= 1.40 A No. of residues = 3 ------- ------- --------------- B 322 SER matches A 4 SER B 439 LYS matches A 14 LYS B 440 THR matches A 15 THR TRANSFORM 0.1880 0.3813 0.9051 0.6324 0.6581 -0.4086 -0.7515 0.6492 -0.1174 -10.116 100.748 77.514 Match found in 1dfo_c04 SERINE HYDROXYMETHYLTRANSFERASE Pattern 1dfo_c04 Query structure RMSD= 1.41 A No. of residues = 3 ------- ------- --------------- A 57 GLU matches A 124 GLU A 226 THR matches A 34 THR A 229 LYS matches A 60 LYS TRANSFORM 0.7608 -0.3760 0.5290 -0.6211 -0.6584 0.4252 0.1884 -0.6520 -0.7344 -10.603 42.019 75.460 Match found in 1dfo_c06 SERINE HYDROXYMETHYLTRANSFERASE Pattern 1dfo_c06 Query structure RMSD= 1.41 A No. of residues = 3 ------- ------- --------------- C 57 GLU matches A 124 GLU C 226 THR matches A 34 THR C 229 LYS matches A 60 LYS TRANSFORM 0.2558 0.9478 -0.1904 -0.5640 -0.0136 -0.8257 -0.7851 0.3186 0.5311 22.942 76.727 63.646 Match found in 1dfo_c07 SERINE HYDROXYMETHYLTRANSFERASE Pattern 1dfo_c07 Query structure RMSD= 1.41 A No. of residues = 3 ------- ------- --------------- D 57 GLU matches A 124 GLU D 226 THR matches A 34 THR D 229 LYS matches A 60 LYS TRANSFORM 0.8024 0.1749 -0.5706 0.5757 0.0254 0.8173 0.1574 -0.9843 -0.0802 16.930 66.745 53.363 Match found in 1dfo_c05 SERINE HYDROXYMETHYLTRANSFERASE Pattern 1dfo_c05 Query structure RMSD= 1.41 A No. of residues = 3 ------- ------- --------------- B 57 GLU matches A 124 GLU B 226 THR matches A 34 THR B 229 LYS matches A 60 LYS TRANSFORM 0.6766 0.1615 0.7185 0.5138 0.5954 -0.6176 -0.5275 0.7870 0.3199 -8.118 -72.163 33.641 Match found in 3j9x_d00 A VIRUS THAT INFECTS A HYPERTHERMOPH Pattern 3j9x_d00 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- A 71 PRO matches A 103 PRO A 74 ALA matches A 98 ALA A 81 LEU matches A 202 LEU TRANSFORM 0.0648 0.8860 0.4592 0.7491 -0.3472 0.5642 0.6593 0.3075 -0.6862 34.635 -136.156 -152.106 Match found in 1xny_c01 PROPIONYL-COA CARBOXYLASE COMPLEX B Pattern 1xny_c01 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- A 420 ALA matches A 172 ALA B 182 GLY matches A 165 GLY B 183 GLY matches A 170 GLY TRANSFORM 0.6938 0.6106 0.3817 -0.4527 0.7821 -0.4282 -0.5600 0.1243 0.8191 -21.647 45.216 77.914 Match found in 6kqm_d03 THERMUS THERMOPHILUS INITIAL TRANSCR Pattern 6kqm_d03 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- D 628 ARG matches A 10 ARG D 705 ALA matches A 59 ALA D 706 PRO matches A 58 PRO TRANSFORM -0.2705 -0.7842 0.5585 0.1710 0.5318 0.8294 -0.9474 0.3199 -0.0098 -11.847 11.885 177.867 Match found in 7lri_d01 DNA/RNA_polymerases Pattern 7lri_d01 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 86 PHE A 63 ILE matches A 79 ILE A 74 LEU matches A 62 LEU TRANSFORM -0.4210 -0.6153 0.6665 0.8456 -0.5321 0.0430 0.3282 0.5817 0.7442 -1.173 -2.229 9.657 Match found in 1pnl_c00 PENICILLIN AMIDOHYDROLASE Pattern 1pnl_c00 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- B 1 SER matches A 4 SER B 69 ALA matches A 7 ALA B 241 ASN matches A 3 ASN TRANSFORM -0.9664 -0.1445 0.2126 0.1612 -0.9849 0.0634 0.2002 0.0956 0.9751 23.525 14.476 94.499 Match found in 1ct9_c07 ASPARAGINE SYNTHETASE B Pattern 1ct9_c07 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- D 1 ALA matches A 42 ALA D 74 ASN matches A 43 ASN D 75 GLY matches A 44 GLY TRANSFORM 0.5711 0.7563 0.3190 0.1012 0.3208 -0.9417 -0.8146 0.5702 0.1067 -17.184 84.523 55.315 Match found in 1u0c_d05 Homing_endonucleases Pattern 1u0c_d05 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- B 322 SER matches A 4 SER B 439 LYS matches A 14 LYS B 440 THR matches A 15 THR TRANSFORM -0.9051 -0.2793 -0.3207 -0.2160 0.9515 -0.2191 0.3664 -0.1290 -0.9215 203.827 157.265 158.401 Match found in 8e8m_d02 MYCOBACTERIUM TUBERCULOSIS RNAP PAUS Pattern 8e8m_d02 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- D 502 PRO matches A 161 PRO D 867 THR matches A 163 THR D 868 ALA matches A 143 ALA TRANSFORM 0.0432 -0.7734 0.6324 0.6739 -0.4447 -0.5900 0.7376 0.4517 0.5020 217.465 179.661 211.843 Match found in 8b3d_d02 P-loop_containing_nucleoside_triphos Pattern 8b3d_d02 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- b 795 ILE matches A 61 ILE b 796 PHE matches A 86 PHE b 800 ILE matches A 79 ILE TRANSFORM 0.3578 0.7137 -0.6021 -0.1840 0.6861 0.7039 0.9155 -0.1410 0.3768 -1.025 38.725 1.581 Match found in 3qym_d06 p53-like_transcription_factors Pattern 3qym_d06 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- C 307 ALA matches A 109 ALA C 308 CYH matches A 94 CYH C 311 ARG matches A 142 ARG TRANSFORM 0.3578 0.7137 -0.6021 -0.1840 0.6861 0.7039 0.9155 -0.1410 0.3768 -1.025 38.725 1.581 Match found in 3qym_d01 p53-like_transcription_factors Pattern 3qym_d01 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- C 307 ALA matches A 109 ALA C 308 CYH matches A 94 CYH C 311 ARG matches A 142 ARG TRANSFORM 0.2578 0.3209 -0.9114 -0.1610 -0.9158 -0.3680 -0.9527 0.2416 -0.1844 57.983 -6.477 18.386 Match found in 4aqu_d05 Homing_endonucleases Pattern 4aqu_d05 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- B 222 SER matches A 4 SER B 339 LYS matches A 14 LYS B 340 THR matches A 15 THR TRANSFORM 0.2578 0.3209 -0.9114 -0.1610 -0.9158 -0.3680 -0.9527 0.2416 -0.1844 57.983 -6.477 18.386 Match found in 4aqu_d03 Homing_endonucleases Pattern 4aqu_d03 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- B 222 SER matches A 4 SER B 339 LYS matches A 14 LYS B 340 THR matches A 15 THR TRANSFORM 0.2780 0.2036 -0.9388 0.3266 0.8990 0.2917 0.9034 -0.3877 0.1834 46.589 -5.901 -38.418 Match found in 4gg4_d00 Thiolase-like Pattern 4gg4_d00 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- A 301 ASP matches A 51 ASP A 335 ASP matches A 49 ASP A 369 ASP matches A 24 ASP TRANSFORM -0.0150 -0.9902 -0.1386 -0.4382 0.1311 -0.8893 0.8988 0.0474 -0.4359 171.377 190.974 184.392 Match found in 8dy7_d00 STREPTOMYCES VENEZUELAE RNAP TRANSCR Pattern 8dy7_d00 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- F 219 VAL matches A 96 VAL F 220 LYS matches A 95 LYS F 223 LEU matches A 91 LEU TRANSFORM -0.2341 -0.7943 0.5607 0.2164 0.5197 0.8265 -0.9478 0.3148 0.0502 -30.287 9.175 54.268 Match found in 3v4i_d01 DNA/RNA_polymerases Pattern 3v4i_d01 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 86 PHE A 63 ILE matches A 79 ILE A 74 LEU matches A 62 LEU TRANSFORM -0.2341 -0.7943 0.5607 0.2164 0.5197 0.8265 -0.9478 0.3148 0.0502 -30.287 9.175 54.268 Match found in 3v4i_d00 DNA/RNA_polymerases Pattern 3v4i_d00 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 86 PHE A 63 ILE matches A 79 ILE A 74 LEU matches A 62 LEU TRANSFORM 0.8271 -0.4847 -0.2847 0.2407 0.7630 -0.5999 0.5080 0.4276 0.7477 73.797 150.403 96.664 Match found in 7wwv_d07 DNA BOUND-ICP1 CSY COMPLEX Pattern 7wwv_d07 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- F 9 VAL matches A 104 VAL F 94 LEU matches A 64 LEU F 300 VAL matches A 96 VAL TRANSFORM 0.8125 0.1602 -0.5606 0.5643 -0.4578 0.6870 -0.1466 -0.8745 -0.4623 156.008 123.444 133.357 Match found in 7ye2_d06 Insert_subdomain_of_RNA_polymerase_a Pattern 7ye2_d06 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- F 116 VAL matches A 111 VAL F 120 LEU matches A 149 LEU F 441 PHE matches A 116 PHE TRANSFORM -0.2864 0.2915 0.9127 0.8620 -0.3375 0.3783 0.4183 0.8951 -0.1546 168.051 146.862 153.289 Match found in 6xl5_d09 cAMP-binding_domain-like Pattern 6xl5_d09 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- C 542 ARG matches A 142 ARG C 567 PRO matches A 161 PRO D 790 THR matches A 203 THR TRANSFORM -0.9612 0.2461 0.1243 -0.0669 0.2293 -0.9711 -0.2675 -0.9417 -0.2039 86.486 21.995 7.544 Match found in 1t4c_c02 FORMYL-COENZYME A TRANSFERASE Pattern 1t4c_c02 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- A 261 GLY matches A 69 GLY B 17 GLN matches A 72 GLN B 140 GLU matches A 70 GLU TRANSFORM 0.3229 0.9455 -0.0429 -0.9379 0.3257 0.1191 0.1266 0.0018 0.9920 44.020 61.155 6.694 Match found in 1ct9_c05 ASPARAGINE SYNTHETASE B Pattern 1ct9_c05 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- B 1 ALA matches A 42 ALA B 74 ASN matches A 43 ASN B 75 GLY matches A 44 GLY TRANSFORM -0.4932 -0.2861 0.8215 0.8385 -0.4079 0.3613 0.2318 0.8670 0.4411 177.061 126.705 152.448 Match found in 6vvy_d10 beta_and_beta-prime_subunits_of_DNA_ Pattern 6vvy_d10 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- D 502 PRO matches A 201 PRO D 867 THR matches A 15 THR D 868 ALA matches A 12 ALA TRANSFORM -0.4932 -0.2861 0.8215 0.8385 -0.4079 0.3613 0.2318 0.8670 0.4411 177.061 126.705 152.448 Match found in 6vvy_d08 MYCOBACTERIUM TUBERCULOSIS WT RNAP T Pattern 6vvy_d08 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- D 502 PRO matches A 201 PRO D 867 THR matches A 15 THR D 868 ALA matches A 12 ALA TRANSFORM 0.8248 -0.3686 0.4287 -0.3118 -0.9291 -0.1990 0.4716 0.0305 -0.8813 131.468 191.775 148.813 Match found in 8e74_d05 beta_and_beta-prime_subunits_of_DNA_ Pattern 8e74_d05 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- D 502 PRO matches A 161 PRO D 867 THR matches A 163 THR D 868 ALA matches A 143 ALA TRANSFORM 0.8248 -0.3686 0.4287 -0.3118 -0.9291 -0.1990 0.4716 0.0305 -0.8813 131.468 191.775 148.813 Match found in 8e74_d03 MYCOBACTERIUM TUBERCULOSIS RNAP PAUS Pattern 8e74_d03 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- D 502 PRO matches A 161 PRO D 867 THR matches A 163 THR D 868 ALA matches A 143 ALA TRANSFORM 0.4273 0.8263 -0.3669 -0.4025 0.5372 0.7412 0.8096 -0.1690 0.5621 -36.724 52.716 6.460 Match found in 3qym_d03 p53-like_transcription_factors Pattern 3qym_d03 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- E 307 ALA matches A 109 ALA E 308 CYH matches A 94 CYH E 311 ARG matches A 142 ARG TRANSFORM -0.6396 0.7680 -0.0320 -0.5443 -0.4231 0.7244 0.5428 0.4808 0.6886 37.132 68.566 41.440 Match found in 1ddj_c14 PLASMINOGEN Pattern 1ddj_c14 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- C 603 HIS matches A 106 HIS C 646 ASP matches A 108 ASP C 739 GLY matches A 170 GLY TRANSFORM -0.3870 -0.8327 0.3960 0.5592 -0.5534 -0.6173 0.7332 -0.0174 0.6798 30.122 -2.142 10.366 Match found in 3qym_d02 p53-like_transcription_factors Pattern 3qym_d02 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- D 307 ALA matches A 109 ALA D 308 CYH matches A 94 CYH D 311 ARG matches A 142 ARG TRANSFORM 0.4092 0.7871 -0.4615 0.6489 0.1045 0.7537 0.6414 -0.6079 -0.4680 28.180 -6.719 15.118 Match found in 3qym_d00 p53-like_transcription_factors Pattern 3qym_d00 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- A 307 ALA matches A 109 ALA A 308 CYH matches A 94 CYH A 311 ARG matches A 142 ARG TRANSFORM 0.4034 0.9108 0.0872 -0.0418 -0.0769 0.9962 0.9140 -0.4055 0.0071 -0.003 9.442 -14.432 Match found in 1g9y_d01 Homing_endonucleases Pattern 1g9y_d01 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- A 22 SER matches A 4 SER A 139 LYS matches A 14 LYS A 140 THR matches A 15 THR TRANSFORM -0.4723 -0.3821 0.7943 -0.4464 0.8807 0.1582 -0.7601 -0.2798 -0.5865 -11.626 62.151 187.016 Match found in 1pjh_c00 ENOYL-COA ISOMERASE; ECI1P Pattern 1pjh_c00 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- A 70 ALA matches A 7 ALA A 126 LEU matches A 5 LEU A 158 GLU matches A 57 GLU TRANSFORM -0.3046 -0.7138 0.6307 0.3765 -0.6984 -0.6086 0.8749 0.0520 0.4815 -6.011 10.210 3.881 Match found in 3qym_d04 p53-like_transcription_factors Pattern 3qym_d04 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- F 307 ALA matches A 109 ALA F 308 CYH matches A 94 CYH F 311 ARG matches A 142 ARG TRANSFORM -0.3692 -0.8522 0.3707 0.0877 0.3652 0.9268 -0.9252 0.3747 -0.0601 -9.306 5.457 179.696 Match found in 5i3u_d01 DNA/RNA_polymerases Pattern 5i3u_d01 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 86 PHE A 63 ILE matches A 79 ILE A 74 LEU matches A 62 LEU TRANSFORM 0.5356 0.7598 0.3685 0.2006 0.3095 -0.9295 -0.8203 0.5718 0.0134 -16.899 80.029 58.149 Match found in 1t9j_d05 Homing_endonucleases Pattern 1t9j_d05 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- B 322 SER matches A 4 SER B 439 LYS matches A 14 LYS B 440 THR matches A 15 THR TRANSFORM -0.1175 -0.7557 0.6443 -0.7432 0.4973 0.4476 -0.6587 -0.4262 -0.6201 220.804 250.544 267.711 Match found in 5vvs_d00 RNA POL II ELONGATION COMPLEX Pattern 5vvs_d00 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- A 448 PRO matches A 201 PRO A 831 THR matches A 15 THR A 832 ALA matches A 12 ALA TRANSFORM -0.3467 -0.7921 0.5023 -0.5582 -0.2561 -0.7892 0.7538 -0.5540 -0.3534 -35.719 58.429 10.862 Match found in 3qym_d05 p53-like_transcription_factors Pattern 3qym_d05 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- H 307 ALA matches A 109 ALA H 308 CYH matches A 94 CYH H 311 ARG matches A 142 ARG TRANSFORM -0.7299 0.6662 0.1529 -0.2808 -0.0883 -0.9557 -0.6232 -0.7405 0.2515 114.230 169.682 135.561 Match found in 7wwv_d07 DNA BOUND-ICP1 CSY COMPLEX Pattern 7wwv_d07 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- F 9 VAL matches A 174 VAL F 94 LEU matches A 202 LEU F 300 VAL matches A 96 VAL TRANSFORM 0.8871 -0.4379 -0.1457 -0.0627 0.1984 -0.9781 0.4572 0.8769 0.1486 -15.522 -17.032 27.401 Match found in 4yg7_d04 lambda_repressor-like_DNA-binding_do Pattern 4yg7_d04 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- E 38 LYS matches A 67 LYS E 39 GLN matches A 72 GLN E 43 SER matches A 31 SER TRANSFORM 0.5348 -0.6707 0.5140 0.5472 -0.1887 -0.8154 0.6439 0.7174 0.2661 5.012 36.828 11.696 Match found in 2fll_d01 DNA/RNA_polymerases Pattern 2fll_d01 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- A 301 SER matches A 122 SER A 343 ARG matches A 118 ARG A 361 GLN matches A 115 GLN TRANSFORM 0.5506 -0.5956 -0.5849 -0.1933 -0.7726 0.6048 -0.8121 -0.2200 -0.5405 -52.406 -15.345 191.110 Match found in 1pjh_c01 ENOYL-COA ISOMERASE; ECI1P Pattern 1pjh_c01 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- B 70 ALA matches A 7 ALA B 126 LEU matches A 5 LEU B 158 GLU matches A 57 GLU TRANSFORM 0.3203 -0.8909 0.3221 -0.4264 -0.4392 -0.7907 0.8459 0.1159 -0.5206 214.039 215.039 225.030 Match found in 8b3d_d02 P-loop_containing_nucleoside_triphos Pattern 8b3d_d02 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- b 795 ILE matches A 61 ILE b 796 PHE matches A 86 PHE b 800 ILE matches A 177 ILE TRANSFORM -0.3925 -0.9153 -0.0908 -0.0492 -0.0777 0.9958 -0.9184 0.3953 -0.0146 18.865 9.852 102.478 Match found in 2i3p_d02 Homing_endonucleases Pattern 2i3p_d02 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- A 22 SER matches A 4 SER A 139 LYS matches A 14 LYS A 140 THR matches A 15 THR TRANSFORM 0.7940 0.5915 -0.1404 0.5962 -0.7123 0.3704 0.1191 -0.3778 -0.9182 97.675 68.246 126.057 Match found in 6kj6_d04 CRYO-EM STRUCTURE OF ESCHERICHIA COL Pattern 6kj6_d04 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- C 508 SER matches A 52 SER F 226 LEU matches A 39 LEU F 237 ILE matches A 9 ILE TRANSFORM 0.4694 0.1051 -0.8767 -0.8789 -0.0398 -0.4754 -0.0849 0.9937 0.0736 79.169 109.160 77.125 Match found in 1lxa_c00 acyl-[acyl-carrier-protein]-UDP-N-ac Pattern 1lxa_c00 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- A 125 HIS matches A 40 HIS A 126 ASP matches A 51 ASP A 143 GLY matches A 56 GLY TRANSFORM -0.3351 -0.9400 -0.0633 -0.6292 0.1733 0.7577 -0.7013 0.2938 -0.6496 34.672 -10.548 28.325 Match found in 4uqm_d00 Uracil-DNA_glycosylase-like Pattern 4uqm_d00 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- A 209 PRO matches A 201 PRO A 210 LEU matches A 202 LEU A 214 TYR matches A 189 TYR TRANSFORM 0.4293 -0.3654 -0.8259 0.8538 -0.1339 0.5031 -0.2944 -0.9212 0.2545 -28.290 1.243 28.421 Match found in 3exj_d02 p53-like_transcription_factors Pattern 3exj_d02 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- A 273 ALA matches A 109 ALA A 274 CYH matches A 94 CYH A 277 ARG matches A 142 ARG TRANSFORM -0.6766 -0.6766 -0.2904 0.7292 -0.5610 -0.3918 0.1022 -0.4769 0.8730 49.982 -61.850 23.740 Match found in 1i6h_d01 RNA POLYMERASE II ELONGATION COMPLEX Pattern 1i6h_d01 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- A 448 PRO matches A 201 PRO A 831 THR matches A 15 THR A 832 ALA matches A 12 ALA TRANSFORM -0.6766 -0.6766 -0.2904 0.7292 -0.5610 -0.3918 0.1022 -0.4769 0.8730 49.982 -61.850 23.740 Match found in 1i6h_d00 beta_and_beta-prime_subunits_of_DNA_ Pattern 1i6h_d00 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- A 448 PRO matches A 201 PRO A 831 THR matches A 15 THR A 832 ALA matches A 12 ALA TRANSFORM -0.8504 -0.3236 -0.4149 0.0840 -0.8619 0.5001 -0.5194 0.3904 0.7601 -6.875 -73.940 1.746 Match found in 3v4i_d02 DNA/RNA_polymerases Pattern 3v4i_d02 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- C 61 PHE matches A 23 PHE C 63 ILE matches A 48 ILE C 74 LEU matches A 27 LEU TRANSFORM 0.5481 -0.8239 -0.1443 -0.0636 0.1310 -0.9893 0.8340 0.5514 0.0194 -68.094 91.221 -51.242 Match found in 3ksb_d02 Type_II_DNA_topoisomerase Pattern 3ksb_d02 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- B 28 ARG matches A 10 ARG B 80 SER matches A 4 SER B 170 ILE matches A 61 ILE TRANSFORM -0.1849 -0.1092 -0.9767 -0.9416 -0.2650 0.2079 -0.2816 0.9580 -0.0538 224.046 236.674 244.077 Match found in 7vpz_d09 "Winged_helix"_DNA-binding_domain Pattern 7vpz_d09 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- F 410 LEU matches A 27 LEU F 412 GLU matches A 22 GLU F 415 ASP matches A 24 ASP TRANSFORM 0.5612 -0.3903 0.7299 0.1600 -0.8140 -0.5584 0.8121 0.4302 -0.3944 -90.287 0.681 -25.482 Match found in 6uqi_d00 DNA/RNA_polymerases Pattern 6uqi_d00 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- A 322 SER matches A 162 SER A 378 LEU matches A 91 LEU A 382 ARG matches A 142 ARG TRANSFORM -0.0096 0.3259 -0.9454 -0.5604 0.7812 0.2750 0.8281 0.5325 0.1751 175.270 128.099 71.857 Match found in 8k27_d07 ICP1 CSY-DSDNA COMPLEX (PARTIAL DUPL Pattern 8k27_d07 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- H 9 VAL matches A 104 VAL H 94 LEU matches A 64 LEU H 300 VAL matches A 96 VAL TRANSFORM 0.9995 -0.0214 0.0226 -0.0246 -0.0999 0.9947 -0.0191 -0.9948 -0.1004 -8.699 -6.566 15.796 Match found in 2ivk_d02 His-Me_finger_endonucleases Pattern 2ivk_d02 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- C 69 GLN matches A 115 GLN C 72 ARG matches A 118 ARG C 131 SER matches A 122 SER TRANSFORM 0.9995 -0.0214 0.0226 -0.0246 -0.0999 0.9947 -0.0191 -0.9948 -0.1004 -8.699 -6.566 15.796 Match found in 2ivk_d01 His-Me_finger_endonucleases Pattern 2ivk_d01 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- C 69 GLN matches A 115 GLN C 72 ARG matches A 118 ARG C 131 SER matches A 122 SER TRANSFORM -0.6838 0.7297 -0.0012 -0.4804 -0.4489 0.7535 0.5493 0.5158 0.6575 40.700 67.264 -21.636 Match found in 1ddj_c12 PLASMINOGEN Pattern 1ddj_c12 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- A 603 HIS matches A 106 HIS A 646 ASP matches A 108 ASP A 739 GLY matches A 170 GLY TRANSFORM 0.8213 0.4276 0.3776 0.0558 0.5985 -0.7992 -0.5678 0.6774 0.4677 -35.612 84.233 154.090 Match found in 1ct9_c04 ASPARAGINE SYNTHETASE B Pattern 1ct9_c04 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- A 1 ALA matches A 42 ALA A 74 ASN matches A 43 ASN A 75 GLY matches A 44 GLY TRANSFORM 0.5454 0.7763 -0.3161 0.4110 -0.5763 -0.7064 -0.7305 0.2553 -0.6334 10.316 -66.644 54.838 Match found in 3j9x_d00 A VIRUS THAT INFECTS A HYPERTHERMOPH Pattern 3j9x_d00 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- A 71 PRO matches A 103 PRO A 74 ALA matches A 98 ALA A 81 LEU matches A 140 LEU TRANSFORM 0.8689 -0.0305 0.4941 -0.4934 0.0272 0.8694 -0.0400 -0.9992 0.0086 144.535 223.812 190.753 Match found in 6z9s_d02 beta_and_beta-prime_subunits_of_DNA_ Pattern 6z9s_d02 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- Y 427 PRO matches A 201 PRO Y 790 THR matches A 15 THR Y 791 ALA matches A 12 ALA TRANSFORM 0.5170 0.7071 -0.4824 0.0157 -0.5713 -0.8206 -0.8558 0.4167 -0.3065 -13.529 96.008 69.704 Match found in 1bd3_c00 URACIL PHOSPHORIBOSYLTRANSFERASE Pattern 1bd3_c00 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- A 137 ARG matches A 142 ARG A 141 THR matches A 192 THR A 235 ASP matches A 147 ASP TRANSFORM -0.8828 -0.4346 -0.1783 0.0224 -0.4181 0.9081 -0.4692 0.7977 0.3788 20.561 10.072 160.080 Match found in 7lri_d01 DNA/RNA_polymerases Pattern 7lri_d01 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 86 PHE A 63 ILE matches A 79 ILE A 74 LEU matches A 74 LEU TRANSFORM -0.4683 -0.6403 0.6089 0.7530 0.0713 0.6541 -0.4623 0.7648 0.4488 15.048 -26.965 65.274 Match found in 1ct9_c06 ASPARAGINE SYNTHETASE B Pattern 1ct9_c06 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- C 1 ALA matches A 42 ALA C 74 ASN matches A 43 ASN C 75 GLY matches A 44 GLY TRANSFORM 0.4288 0.6031 0.6726 -0.2337 0.7933 -0.5622 -0.8726 0.0839 0.4811 107.370 176.521 174.581 Match found in 8k28_d04 ICP1 CSY-DSDNA COMPLEX (FORM 1) Pattern 8k28_d04 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- E 9 VAL matches A 104 VAL E 94 LEU matches A 64 LEU E 300 VAL matches A 96 VAL TRANSFORM -0.4900 -0.8518 -0.1854 0.8327 -0.5203 0.1897 -0.2580 -0.0614 0.9642 -13.418 -8.217 23.937 Match found in 3v4i_d01 DNA/RNA_polymerases Pattern 3v4i_d01 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 23 PHE A 63 ILE matches A 48 ILE A 74 LEU matches A 27 LEU TRANSFORM -0.4900 -0.8518 -0.1854 0.8327 -0.5203 0.1897 -0.2580 -0.0614 0.9642 -13.418 -8.217 23.937 Match found in 3v4i_d00 DNA/RNA_polymerases Pattern 3v4i_d00 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 23 PHE A 63 ILE matches A 48 ILE A 74 LEU matches A 27 LEU TRANSFORM 0.5638 0.7524 0.3407 0.1500 0.3123 -0.9381 -0.8122 0.5799 0.0633 -17.616 82.272 56.540 Match found in 1g9y_d05 Homing_endonucleases Pattern 1g9y_d05 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- B 222 SER matches A 4 SER B 339 LYS matches A 14 LYS B 340 THR matches A 15 THR TRANSFORM 0.4516 -0.8635 0.2244 -0.7937 -0.5037 -0.3411 0.4076 -0.0241 -0.9128 -7.317 104.514 -7.182 Match found in 7jvt_d01 lambda_repressor-like_DNA-binding_do Pattern 7jvt_d01 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- C 44 GLN matches A 171 GLN C 45 SER matches A 92 SER C 55 ASN matches A 168 ASN TRANSFORM -0.1610 0.9494 -0.2697 0.5636 -0.1359 -0.8148 -0.8102 -0.2832 -0.5132 34.278 -11.951 188.231 Match found in 1pjh_c02 ENOYL-COA ISOMERASE; ECI1P Pattern 1pjh_c02 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- C 70 ALA matches A 7 ALA C 126 LEU matches A 5 LEU C 158 GLU matches A 57 GLU TRANSFORM 0.9070 -0.1994 0.3709 0.1478 0.9755 0.1630 -0.3944 -0.0931 0.9142 135.660 239.239 167.411 Match found in 7mei_d01 COMPOSITE STRUCTURE OF EC+EC organis Pattern 7mei_d01 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- A 448 PRO matches A 201 PRO A 831 THR matches A 15 THR A 832 ALA matches A 12 ALA TRANSFORM 0.4691 -0.0265 -0.8827 0.3998 0.8976 0.1855 0.7875 -0.4399 0.4317 65.050 108.339 40.122 Match found in 5w66_d01 RNA POLYMERASE I INITIAL TRANSCRIBIN Pattern 5w66_d01 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- P 293 ARG matches A 142 ARG P 294 HIS matches A 141 HIS P 295 THR matches A 163 THR TRANSFORM -0.0513 -0.2640 0.9631 -0.1078 -0.9573 -0.2682 0.9928 -0.1176 0.0206 44.872 -12.942 -39.940 Match found in 1d6o_c00 FK506-BINDING PROTEIN Pattern 1d6o_c00 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- A 37 ASP matches A 24 ASP A 56 ILE matches A 21 ILE A 82 TYR matches A 90 TYR TRANSFORM -0.0603 0.2694 0.9611 -0.9310 -0.3626 0.0432 0.3601 -0.8922 0.2727 180.652 254.229 258.224 Match found in 8way_d01 beta_and_beta-prime_subunits_of_DNA_ Pattern 8way_d01 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- o 461 GLN matches A 8 GLN o 854 THR matches A 18 THR o 855 ALA matches A 198 ALA TRANSFORM -0.3184 -0.1814 0.9304 0.5289 -0.8486 0.0156 0.7867 0.4970 0.3661 -16.498 -2.544 123.274 Match found in 5i3u_d01 DNA/RNA_polymerases Pattern 5i3u_d01 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 87 PHE A 63 ILE matches A 9 ILE A 74 LEU matches A 85 LEU TRANSFORM 0.5587 0.7653 0.3197 0.1389 0.2937 -0.9458 -0.8177 0.5727 0.0578 -16.232 82.493 56.871 Match found in 1t9i_d05 Homing_endonucleases Pattern 1t9i_d05 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- B 322 SER matches A 4 SER B 439 LYS matches A 14 LYS B 440 THR matches A 15 THR TRANSFORM 0.5587 0.7653 0.3197 0.1389 0.2937 -0.9458 -0.8177 0.5727 0.0578 -16.232 82.493 56.871 Match found in 1t9i_d03 Homing_endonucleases Pattern 1t9i_d03 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- B 322 SER matches A 4 SER B 439 LYS matches A 14 LYS B 440 THR matches A 15 THR TRANSFORM -0.1729 -0.5268 0.8322 -0.7655 -0.4598 -0.4501 0.6198 -0.7148 -0.3238 -2.241 39.327 -7.958 Match found in 1bp2_c00 PHOSPHOLIPASE A2 (E.C.3.1.1.4) (PHOS Pattern 1bp2_c00 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- 30 GLY matches A 45 GLY 48 HIS matches A 40 HIS 99 ASP matches A 51 ASP TRANSFORM 0.3402 0.8530 -0.3957 -0.5648 0.5218 0.6393 0.7519 0.0060 0.6593 35.179 -57.418 -10.239 Match found in 3j9x_d00 A VIRUS THAT INFECTS A HYPERTHERMOPH Pattern 3j9x_d00 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- A 71 PRO matches A 58 PRO A 74 ALA matches A 59 ALA A 81 LEU matches A 62 LEU TRANSFORM -0.9870 0.0708 0.1446 -0.1609 -0.4109 -0.8974 -0.0041 -0.9089 0.4169 -16.340 16.992 1.216 Match found in 1qrz_c21 PLASMINOGEN Pattern 1qrz_c21 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- B 603 HIS matches A 141 HIS B 646 ASP matches A 147 ASP B 739 GLY matches A 158 GLY TRANSFORM 0.4012 0.9112 0.0935 -0.0441 -0.0827 0.9956 0.9149 -0.4035 0.0070 0.169 9.359 -14.621 Match found in 1t9j_d04 Homing_endonucleases Pattern 1t9j_d04 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- A 22 SER matches A 4 SER A 139 LYS matches A 14 LYS A 140 THR matches A 15 THR TRANSFORM 0.4012 0.9112 0.0935 -0.0441 -0.0827 0.9956 0.9149 -0.4035 0.0070 0.169 9.359 -14.621 Match found in 1t9j_d01 Homing_endonucleases Pattern 1t9j_d01 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- A 22 SER matches A 4 SER A 139 LYS matches A 14 LYS A 140 THR matches A 15 THR TRANSFORM 0.9123 -0.2220 0.3441 0.1586 0.9663 0.2027 -0.3775 -0.1303 0.9168 70.026 121.063 112.922 Match found in 7mk9_d03 COMPLEX STRUCTURE OF TRAILING EC OF Pattern 7mk9_d03 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- A 448 PRO matches A 201 PRO A 831 THR matches A 15 THR A 832 ALA matches A 12 ALA TRANSFORM 0.9123 -0.2220 0.3441 0.1586 0.9663 0.2027 -0.3775 -0.1303 0.9168 70.026 121.063 112.922 Match found in 7mk9_d01 beta_and_beta-prime_subunits_of_DNA_ Pattern 7mk9_d01 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- A 448 PRO matches A 201 PRO A 831 THR matches A 15 THR A 832 ALA matches A 12 ALA TRANSFORM 0.4752 -0.8454 -0.2440 0.4217 0.4622 -0.7801 0.7723 0.2678 0.5761 -18.299 63.114 55.702 Match found in 3oda_d06 Glucocorticoid_receptor-like_DNA-bin Pattern 3oda_d06 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- H 44 PHE matches A 86 PHE H 48 VAL matches A 104 VAL H 49 PRO matches A 103 PRO TRANSFORM 0.3948 0.9136 0.0973 -0.0556 -0.0819 0.9951 0.9171 -0.3983 0.0185 0.202 10.029 -14.886 Match found in 1u0c_d04 Homing_endonucleases Pattern 1u0c_d04 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- A 22 SER matches A 4 SER A 139 LYS matches A 14 LYS A 140 THR matches A 15 THR TRANSFORM 0.3948 0.9136 0.0973 -0.0556 -0.0819 0.9951 0.9171 -0.3983 0.0185 0.202 10.029 -14.886 Match found in 1u0c_d01 Homing_endonucleases Pattern 1u0c_d01 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- A 22 SER matches A 4 SER A 139 LYS matches A 14 LYS A 140 THR matches A 15 THR TRANSFORM -0.9509 0.1506 0.2703 0.3052 0.3136 0.8992 0.0507 0.9375 -0.3442 165.184 106.165 137.856 Match found in 7f75_d11 Sigma2_domain_of_RNA_polymerase_sigm Pattern 7f75_d11 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- F 270 ILE matches A 9 ILE F 278 LEU matches A 85 LEU F 281 PHE matches A 87 PHE TRANSFORM -0.9564 -0.2822 -0.0750 0.0723 0.0200 -0.9972 0.2829 -0.9591 0.0013 41.190 66.006 -0.947 Match found in 2v9w_d00 DNA/RNA_polymerases Pattern 2v9w_d00 Query structure RMSD= 1.50 A No. of residues = 3 ------- ------- --------------- A 32 VAL matches A 96 VAL A 42 ALA matches A 98 ALA A 44 ALA matches A 138 ALA TRANSFORM -0.7547 -0.3759 0.5378 -0.6504 0.5361 -0.5380 -0.0861 -0.7558 -0.6491 197.176 172.080 171.330 Match found in 7z9g_d00 Type_II_DNA_topoisomerase Pattern 7z9g_d00 Query structure RMSD= 1.50 A No. of residues = 3 ------- ------- --------------- A 82 ASP matches A 147 ASP A 83 SER matches A 146 SER A 119 ALA matches A 113 ALA TRANSFORM 0.7176 -0.2551 0.6480 -0.5006 0.4580 0.7346 -0.4842 -0.8516 0.2010 94.161 132.481 112.887 Match found in 8i87_d00 Toll/Interleukin_receptor_TIR_domain Pattern 8i87_d00 Query structure RMSD= 1.50 A No. of residues = 3 ------- ------- --------------- B 245 PHE matches A 116 PHE B 248 ILE matches A 107 ILE B 251 HIS matches A 106 HIS TRANSFORM 0.1685 0.9005 -0.4009 -0.1502 -0.3785 -0.9133 -0.9742 0.2141 0.0715 90.352 40.178 41.414 Match found in 2dbt_c00 CHITINASE C Pattern 2dbt_c00 Query structure RMSD= 1.50 A No. of residues = 3 ------- ------- --------------- A 147 GLU matches A 6 GLU A 156 GLU matches A 57 GLU A 194 ASN matches A 36 ASN ******************************************************* user.XUML ************************************************************** TRANSFORM 0.3173 -0.8926 0.3203 0.4214 0.4353 0.7956 0.8495 0.1174 -0.5143 16.048 -92.884 -137.959 Match found in 1xny_c00 PROPIONYL-COA CARBOXYLASE COMPLEX B Pattern 1xny_c00 Query structure RMSD= 0.69 A No. of residues = 3 ------- ------- --------------- A 183 GLY matches A 102 GLY B 419 GLY matches A 99 GLY B 420 ALA matches A 98 ALA TRANSFORM 0.6847 -0.5437 0.4854 0.4675 0.8386 0.2797 0.5591 -0.0354 -0.8283 2.736 -86.796 -124.353 Match found in 1xny_c00 PROPIONYL-COA CARBOXYLASE COMPLEX B Pattern 1xny_c00 Query structure RMSD= 0.71 A No. of residues = 3 ------- ------- --------------- A 183 GLY matches A 101 GLY B 419 GLY matches A 99 GLY B 420 ALA matches A 98 ALA TRANSFORM 0.7158 -0.6279 0.3054 0.0980 -0.3427 -0.9343 -0.6913 -0.6988 0.1838 -34.192 21.653 56.755 Match found in 7yul_d00 CRYSTAL STRUCTURE OF HUMAN BEND6 BEN Pattern 7yul_d00 Query structure RMSD= 0.74 A No. of residues = 3 ------- ------- --------------- A 216 SER matches A 194 SER A 217 SER matches A 193 SER A 218 THR matches A 192 THR TRANSFORM -0.3608 0.1239 -0.9244 0.7320 0.6518 -0.1983 -0.5779 0.7482 0.3259 -19.091 10.206 -8.473 Match found in 5cy2_d05 Resolvase-like Pattern 5cy2_d05 Query structure RMSD= 0.80 A No. of residues = 3 ------- ------- --------------- E 140 PHE matches A 86 PHE E 142 ARG matches A 10 ARG F 127 ASN matches A 28 ASN TRANSFORM -0.6879 -0.2250 0.6900 -0.1116 0.9722 0.2058 0.7172 -0.0646 0.6939 217.880 223.295 125.390 Match found in 7zwc_d02 STRUCTURE OF SNAPC:TBP-TFIIA-TFIIB S Pattern 7zwc_d02 Query structure RMSD= 0.88 A No. of residues = 3 ------- ------- --------------- M 283 VAL matches A 137 VAL M 284 THR matches A 205 THR M 287 GLN matches A 207 GLN TRANSFORM 0.0515 0.2262 -0.9727 0.9895 0.1200 0.0802 -0.1349 0.9667 0.2177 28.131 -108.805 -124.739 Match found in 1xny_c00 PROPIONYL-COA CARBOXYLASE COMPLEX B Pattern 1xny_c00 Query structure RMSD= 0.90 A No. of residues = 3 ------- ------- --------------- A 183 GLY matches A 170 GLY B 419 GLY matches A 165 GLY B 420 ALA matches A 143 ALA TRANSFORM 0.5201 0.4833 -0.7042 0.2323 -0.8734 -0.4280 0.8219 -0.0590 0.5665 2.828 67.952 -5.972 Match found in 1mdm_d02 Homeodomain-like Pattern 1mdm_d02 Query structure RMSD= 0.92 A No. of residues = 3 ------- ------- --------------- A 29 ASN matches A 114 ASN A 83 ILE matches A 107 ILE A 86 SER matches A 92 SER TRANSFORM 0.5742 0.1985 0.7943 0.1617 -0.9786 0.1277 -0.8026 -0.0551 0.5939 10.713 -105.068 -123.349 Match found in 1xny_c01 PROPIONYL-COA CARBOXYLASE COMPLEX B Pattern 1xny_c01 Query structure RMSD= 0.93 A No. of residues = 3 ------- ------- --------------- A 420 ALA matches A 98 ALA B 182 GLY matches A 101 GLY B 183 GLY matches A 102 GLY TRANSFORM -0.0457 0.0323 -0.9984 -0.1512 0.9877 0.0389 -0.9874 -0.1527 0.0402 15.506 9.922 -4.452 Match found in 4yit_d03 Homing_endonucleases Pattern 4yit_d03 Query structure RMSD= 0.95 A No. of residues = 3 ------- ------- --------------- A 173 MET matches A 184 MET A 177 ALA matches A 138 ALA A 181 ALA matches A 160 ALA TRANSFORM -0.1065 -0.7787 -0.6182 0.4865 0.5015 -0.7155 -0.8672 0.3769 -0.3254 117.270 -25.781 58.315 Match found in 5c4j_d01 beta_and_beta-prime_subunits_of_DNA_ Pattern 5c4j_d01 Query structure RMSD= 0.96 A No. of residues = 3 ------- ------- --------------- A 315 LEU matches A 27 LEU A 317 LYS matches A 30 LYS A 318 SER matches A 31 SER TRANSFORM 0.5220 0.4637 -0.7159 -0.8080 0.0002 -0.5891 0.2731 -0.8860 -0.3748 -0.505 51.560 109.289 Match found in 1k78_d06 Homeodomain-like Pattern 1k78_d06 Query structure RMSD= 0.96 A No. of residues = 3 ------- ------- --------------- E 29 ASN matches A 114 ASN E 83 ILE matches A 107 ILE E 86 SER matches A 92 SER TRANSFORM -0.1996 -0.2140 -0.9562 0.9699 0.0961 -0.2239 -0.1398 0.9721 -0.1884 42.379 6.941 55.013 Match found in 1pmi_c00 PHOSPHOMANNOSE ISOMERASE Pattern 1pmi_c00 Query structure RMSD= 0.98 A No. of residues = 3 ------- ------- --------------- 111 GLN matches A 182 GLN 294 GLU matches A 124 GLU 304 ARG matches A 181 ARG TRANSFORM -0.8286 0.2011 -0.5225 0.2834 0.9555 -0.0815 -0.4829 0.2156 0.8487 57.306 8.323 73.216 Match found in 6kql_d04 Sigma2_domain_of_RNA_polymerase_sigm Pattern 6kql_d04 Query structure RMSD= 1.01 A No. of residues = 3 ------- ------- --------------- F 321 ILE matches A 48 ILE F 324 GLU matches A 57 GLU F 332 PHE matches A 87 PHE TRANSFORM -0.1639 -0.4322 -0.8867 -0.5814 -0.6839 0.4408 0.7970 -0.5878 0.1392 -14.287 5.360 105.267 Match found in 1pjh_c01 ENOYL-COA ISOMERASE; ECI1P Pattern 1pjh_c01 Query structure RMSD= 1.02 A No. of residues = 3 ------- ------- --------------- B 70 ALA matches A 7 ALA B 126 LEU matches A 5 LEU B 158 GLU matches A 57 GLU TRANSFORM -0.3893 -0.4010 0.8293 0.4978 0.6659 0.5557 0.7750 -0.6292 0.0596 -16.048 11.832 105.208 Match found in 1pjh_c00 ENOYL-COA ISOMERASE; ECI1P Pattern 1pjh_c00 Query structure RMSD= 1.02 A No. of residues = 3 ------- ------- --------------- A 70 ALA matches A 7 ALA A 126 LEU matches A 5 LEU A 158 GLU matches A 57 GLU TRANSFORM -0.6862 -0.0633 0.7246 0.2224 0.9302 0.2919 0.6926 -0.3615 0.6242 63.401 40.637 54.592 Match found in 1f6d_c02 UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE Pattern 1f6d_c02 Query structure RMSD= 1.03 A No. of residues = 3 ------- ------- --------------- C 95 ASP matches A 128 ASP C 117 GLU matches A 130 GLU C 131 GLU matches A 124 GLU TRANSFORM 0.5183 -0.5757 -0.6324 -0.1422 -0.7872 0.6000 0.8433 0.2211 0.4899 0.070 27.308 -34.223 Match found in 5zk1_d00 Leucine_zipper_domain Pattern 5zk1_d00 Query structure RMSD= 1.04 A No. of residues = 3 ------- ------- --------------- A 293 ASN matches A 3 ASN A 297 ALA matches A 7 ALA A 301 ARG matches A 10 ARG TRANSFORM 0.4164 -0.6406 -0.6452 -0.4523 -0.7616 0.4642 0.7887 -0.0985 0.6068 -8.499 14.606 -50.926 Match found in 6mig_d00 DNA/RNA_polymerases Pattern 6mig_d00 Query structure RMSD= 1.04 A No. of residues = 3 ------- ------- --------------- A 99 LEU matches A 27 LEU A 114 ASP matches A 49 ASP A 116 ARG matches A 47 ARG TRANSFORM 0.6372 0.7677 0.0671 0.1557 -0.0430 -0.9869 0.7548 -0.6393 0.1470 -8.281 9.797 104.791 Match found in 1pjh_c02 ENOYL-COA ISOMERASE; ECI1P Pattern 1pjh_c02 Query structure RMSD= 1.04 A No. of residues = 3 ------- ------- --------------- C 70 ALA matches A 7 ALA C 126 LEU matches A 5 LEU C 158 GLU matches A 57 GLU TRANSFORM -0.7207 0.6931 -0.0180 0.1268 0.1062 -0.9862 0.6816 0.7130 0.1644 231.633 212.354 237.893 Match found in 8dfa_d04 TYPE I-C CASCADE BOUND TO SSDNA TARG Pattern 8dfa_d04 Query structure RMSD= 1.05 A No. of residues = 3 ------- ------- --------------- C 122 VAL matches A 137 VAL C 124 THR matches A 205 THR C 131 GLN matches A 207 GLN TRANSFORM -0.2234 -0.8793 0.4206 0.6421 -0.4574 -0.6153 -0.7334 -0.1326 -0.6668 228.089 180.928 270.454 Match found in 8b3d_d02 P-loop_containing_nucleoside_triphos Pattern 8b3d_d02 Query structure RMSD= 1.06 A No. of residues = 3 ------- ------- --------------- b 795 ILE matches A 61 ILE b 796 PHE matches A 86 PHE b 800 ILE matches A 79 ILE TRANSFORM 0.8066 -0.1357 0.5753 0.5716 -0.0688 -0.8176 -0.1505 -0.9884 -0.0221 -34.863 -21.324 -7.259 Match found in 1be1_c02 GLUTAMATE MUTASE Pattern 1be1_c02 Query structure RMSD= 1.08 A No. of residues = 3 ------- ------- --------------- 14 ASP matches A 108 ASP 16 HIS matches A 106 HIS 67 GLY matches A 195 GLY TRANSFORM -0.2830 0.7039 -0.6515 -0.5332 0.4492 0.7169 -0.7973 -0.5503 -0.2482 43.227 87.099 173.261 Match found in 5fhd_d01 P-loop_containing_nucleoside_triphos Pattern 5fhd_d01 Query structure RMSD= 1.10 A No. of residues = 3 ------- ------- --------------- A 91 TYR matches A 89 TYR A 290 SER matches A 92 SER A 291 LEU matches A 91 LEU TRANSFORM -0.2481 0.8169 -0.5208 -0.6057 -0.5503 -0.5747 0.7560 -0.1729 -0.6313 194.973 251.055 189.161 Match found in 6x43_d02 MFD-BOUND E.COLI RNA POLYMERASE ELON Pattern 6x43_d02 Query structure RMSD= 1.10 A No. of residues = 3 ------- ------- --------------- I1041 ASP matches A 123 ASP I1044 PRO matches A 76 PRO J 259 ARG matches A 181 ARG TRANSFORM 0.8682 0.2641 0.4202 -0.0774 -0.7643 0.6402 -0.4902 0.5883 0.6431 107.335 302.065 68.567 Match found in 6dve_d01 Sigma2_domain_of_RNA_polymerase_sigm Pattern 6dve_d01 Query structure RMSD= 1.12 A No. of residues = 3 ------- ------- --------------- F 25 VAL matches A 82 VAL F 28 ARG matches A 10 ARG F 31 LEU matches A 85 LEU TRANSFORM 0.6740 0.7269 0.1317 -0.7343 0.6399 0.2266 -0.0804 0.2494 -0.9651 -14.622 26.511 44.716 Match found in 1qai_d01 DNA/RNA_polymerases Pattern 1qai_d01 Query structure RMSD= 1.14 A No. of residues = 3 ------- ------- --------------- A 99 LEU matches A 27 LEU A 114 ASP matches A 49 ASP A 116 ARG matches A 47 ARG TRANSFORM -0.1777 0.4007 -0.8988 0.7989 -0.4745 -0.3695 0.5746 0.7837 0.2358 89.710 99.625 30.901 Match found in 6b44_d01 CRYO-EM STRUCTURE OF TYPE I-F CRISPR Pattern 6b44_d01 Query structure RMSD= 1.20 A No. of residues = 3 ------- ------- --------------- B 85 ARG matches A 209 ARG H 231 LEU matches A 156 LEU H 233 LEU matches A 152 LEU TRANSFORM 0.9649 -0.2616 0.0243 0.0609 0.3124 0.9480 0.2556 0.9132 -0.3173 -31.353 4.898 71.331 Match found in 6kqm_d03 THERMUS THERMOPHILUS INITIAL TRANSCR Pattern 6kqm_d03 Query structure RMSD= 1.20 A No. of residues = 3 ------- ------- --------------- D 628 ARG matches A 142 ARG D 705 ALA matches A 109 ALA D 706 PRO matches A 110 PRO TRANSFORM -0.2998 0.3755 0.8770 0.8101 0.5857 0.0261 0.5038 -0.7183 0.4798 -3.531 7.554 -50.115 Match found in 7w5p_d02 CRYSTAL STRUCTURE OF THE DIOXYGENASE Pattern 7w5p_d02 Query structure RMSD= 1.20 A No. of residues = 3 ------- ------- --------------- A 231 PRO matches A 41 PRO A 232 VAL matches A 46 VAL A 234 HIS matches A 40 HIS TRANSFORM -0.2998 0.3755 0.8770 0.8101 0.5857 0.0261 0.5038 -0.7183 0.4798 -3.531 7.554 -50.115 Match found in 7w5p_d00 CRYSTAL STRUCTURE OF THE DIOXYGENASE Pattern 7w5p_d00 Query structure RMSD= 1.20 A No. of residues = 3 ------- ------- --------------- A 231 PRO matches A 41 PRO A 232 VAL matches A 46 VAL A 234 HIS matches A 40 HIS TRANSFORM 0.8141 0.5803 0.0199 -0.3000 0.3910 0.8701 -0.4972 0.7144 -0.4924 -69.981 75.863 0.958 Match found in 7w5p_d04 CRYSTAL STRUCTURE OF THE DIOXYGENASE Pattern 7w5p_d04 Query structure RMSD= 1.20 A No. of residues = 3 ------- ------- --------------- D 231 PRO matches A 41 PRO D 232 VAL matches A 46 VAL D 234 HIS matches A 40 HIS TRANSFORM 0.7795 0.5443 -0.3100 0.0719 0.4139 0.9075 -0.6223 0.7297 -0.2835 165.665 235.631 280.344 Match found in 7xg0_d07 CRYOEM STRUCTURE OF TYPE IV-A CSF-CR Pattern 7xg0_d07 Query structure RMSD= 1.22 A No. of residues = 3 ------- ------- --------------- H 106 ARG matches A 47 ARG H 228 ASP matches A 51 ASP H 229 LEU matches A 50 LEU TRANSFORM 0.1913 0.8661 -0.4618 -0.6956 0.4516 0.5588 -0.6925 -0.2144 -0.6888 -11.960 -8.366 85.630 Match found in 4gdf_d07 P-loop_containing_nucleoside_triphos Pattern 4gdf_d07 Query structure RMSD= 1.22 A No. of residues = 3 ------- ------- --------------- E 267 GLN matches A 171 GLN E 270 TRP matches A 66 TRP E 332 ASN matches A 28 ASN TRANSFORM 0.1932 0.8658 -0.4616 0.6962 -0.4525 -0.5573 0.6914 0.2137 0.6901 -12.087 -20.062 -2.506 Match found in 4gdf_d01 P-loop_containing_nucleoside_triphos Pattern 4gdf_d01 Query structure RMSD= 1.23 A No. of residues = 3 ------- ------- --------------- A 267 GLN matches A 171 GLN A 270 TRP matches A 66 TRP A 332 ASN matches A 28 ASN TRANSFORM 0.1932 0.8658 -0.4616 0.6962 -0.4525 -0.5573 0.6914 0.2137 0.6901 -12.087 -20.062 -2.506 Match found in 4gdf_d04 P-loop_containing_nucleoside_triphos Pattern 4gdf_d04 Query structure RMSD= 1.23 A No. of residues = 3 ------- ------- --------------- A 267 GLN matches A 171 GLN A 270 TRP matches A 66 TRP A 332 ASN matches A 28 ASN TRANSFORM 0.1420 0.9136 -0.3809 -0.8666 -0.0712 -0.4939 0.4784 -0.4003 -0.7816 143.378 174.433 140.217 Match found in 7r06_d00 DNA/RNA_polymerases Pattern 7r06_d00 Query structure RMSD= 1.23 A No. of residues = 3 ------- ------- --------------- E 145 THR matches A 205 THR E 146 GLN matches A 207 GLN E 295 LYS matches A 210 LYS TRANSFORM -0.9220 -0.3788 -0.0805 -0.0765 0.3819 -0.9210 -0.3796 0.8430 0.3811 82.338 23.008 19.392 Match found in 1t4c_c02 FORMYL-COENZYME A TRANSFERASE Pattern 1t4c_c02 Query structure RMSD= 1.23 A No. of residues = 3 ------- ------- --------------- A 261 GLY matches A 69 GLY B 17 GLN matches A 72 GLN B 140 GLU matches A 70 GLU TRANSFORM -0.7278 -0.6689 0.1513 0.3773 -0.2063 0.9028 0.5727 -0.7142 -0.4025 187.567 151.424 194.349 Match found in 8urw_d03 CYANOBACTERIAL RNA POLYMERASE ELONGA Pattern 8urw_d03 Query structure RMSD= 1.24 A No. of residues = 3 ------- ------- --------------- C 400 THR matches A 133 THR C 402 GLU matches A 130 GLU C 403 ARG matches A 209 ARG TRANSFORM 0.5581 -0.4536 -0.6948 0.1856 -0.7479 0.6373 0.8088 0.4846 0.3332 84.665 39.351 -1.075 Match found in 4e68_d00 p53-like_transcription_factors Pattern 4e68_d00 Query structure RMSD= 1.24 A No. of residues = 3 ------- ------- --------------- A 465 SER matches A 4 SER A 466 ASN matches A 3 ASN A 469 GLN matches A 8 GLN TRANSFORM 0.8452 0.4710 0.2526 -0.3066 0.0401 0.9510 -0.4378 0.8812 -0.1782 129.791 232.261 234.825 Match found in 4hf2_d02 "Winged_helix"_DNA-binding_domain Pattern 4hf2_d02 Query structure RMSD= 1.24 A No. of residues = 3 ------- ------- --------------- B 40 SER matches A 92 SER B 41 TYR matches A 90 TYR B 44 GLN matches A 171 GLN TRANSFORM 0.6758 0.7071 -0.2082 0.7151 -0.5603 0.4179 -0.1788 0.4313 0.8843 136.485 106.394 141.420 Match found in 8hyj_d00 A CRYO-EM STRUCTURE OF KTF1-BOUND PO Pattern 8hyj_d00 Query structure RMSD= 1.25 A No. of residues = 3 ------- ------- --------------- A 416 PRO matches A 65 PRO A 772 LEU matches A 27 LEU A 773 ALA matches A 26 ALA TRANSFORM -0.7024 -0.5974 0.3870 0.5469 -0.1050 0.8306 0.4555 -0.7951 -0.4005 38.055 -6.409 21.427 Match found in 2gb7_d01 Restriction_endonuclease-like Pattern 2gb7_d01 Query structure RMSD= 1.25 A No. of residues = 3 ------- ------- --------------- A 114 GLN matches A 183 GLN A 117 ARG matches A 181 ARG A 118 SER matches A 80 SER TRANSFORM -0.8845 0.2643 -0.3845 -0.2366 -0.9643 -0.1186 0.4022 0.0139 -0.9155 244.644 232.722 279.843 Match found in 8tvy_d02 P-loop_containing_nucleoside_triphos Pattern 8tvy_d02 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- M 478 ASP matches A 123 ASP M 479 SER matches A 122 SER M 480 GLU matches A 127 GLU TRANSFORM -0.8845 0.2643 -0.3845 -0.2366 -0.9643 -0.1186 0.4022 0.0139 -0.9155 244.644 232.722 279.843 Match found in 8tvy_d04 P-loop_containing_nucleoside_triphos Pattern 8tvy_d04 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- M 478 ASP matches A 123 ASP M 479 SER matches A 122 SER M 480 GLU matches A 127 GLU TRANSFORM 0.5653 -0.4643 -0.6819 0.1644 -0.7466 0.6446 0.8084 0.4765 0.3457 83.808 39.982 -1.364 Match found in 1bg1_d00 p53-like_transcription_factors Pattern 1bg1_d00 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- A 465 SER matches A 4 SER A 466 ASN matches A 3 ASN A 469 GLN matches A 8 GLN TRANSFORM -0.7109 0.1508 -0.6869 -0.3715 0.7488 0.5489 -0.5971 -0.6455 0.4763 174.067 15.778 4.840 Match found in 1lij_c01 ADENOSINE KINASE Pattern 1lij_c01 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- A 316 ALA matches A 98 ALA A 317 GLY matches A 99 GLY A 318 ASP matches A 100 ASP TRANSFORM -0.0065 -0.9282 0.3721 -0.5280 0.3192 0.7870 0.8492 0.1914 0.4922 12.815 -23.837 -79.332 Match found in 1tz3_c03 PUTATIVE SUGAR KINASE Pattern 1tz3_c03 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- B 250 ALA matches A 98 ALA B 251 GLY matches A 99 GLY B 252 ASP matches A 100 ASP TRANSFORM -0.8452 0.5186 0.1288 0.2806 0.2255 0.9330 -0.4548 -0.8247 0.3361 19.957 0.502 -103.416 Match found in 5h9f_d07 CRYSTAL STRUCTURE OF E. COLI CASCADE Pattern 5h9f_d07 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- J 85 TYR matches A 90 TYR J 103 THR matches A 191 THR J 105 GLN matches A 171 GLN TRANSFORM -0.8210 -0.3175 0.4745 -0.4564 -0.1345 -0.8796 -0.3431 0.9387 0.0345 31.557 65.199 73.030 Match found in 2c3x_p00 ALPHA-AMYLASE G-6 Pattern 2c3x_p00 Query structure RMSD= 1.28 A No. of residues = 3 ------- ------- --------------- A 26 HIS matches A 141 HIS A 76 ASN matches A 151 ASN A 81 ASP matches A 147 ASP TRANSFORM -0.1148 0.4208 0.8999 0.8440 0.5191 -0.1350 0.5239 -0.7440 0.4147 -30.559 7.979 -4.966 Match found in 3v4i_d01 DNA/RNA_polymerases Pattern 3v4i_d01 Query structure RMSD= 1.29 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 87 PHE A 63 ILE matches A 9 ILE A 74 LEU matches A 85 LEU TRANSFORM -0.1148 0.4208 0.8999 0.8440 0.5191 -0.1350 0.5239 -0.7440 0.4147 -30.559 7.979 -4.966 Match found in 3v4i_d00 DNA/RNA_polymerases Pattern 3v4i_d00 Query structure RMSD= 1.29 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 87 PHE A 63 ILE matches A 9 ILE A 74 LEU matches A 85 LEU TRANSFORM -0.7098 -0.0764 -0.7003 0.6108 -0.5621 -0.5577 0.3510 0.8236 -0.4456 33.927 41.897 -1.446 Match found in 3ugm_d01 Thiolase-like Pattern 3ugm_d01 Query structure RMSD= 1.29 A No. of residues = 3 ------- ------- --------------- A 538 ASP matches A 51 ASP A 572 ASP matches A 49 ASP A 606 ILE matches A 48 ILE TRANSFORM 0.8350 0.5474 0.0557 0.5071 -0.7262 -0.4642 0.2137 -0.4158 0.8840 -26.382 -21.807 8.546 Match found in 8hbm_d01 Glucocorticoid_receptor-like_DNA-bin Pattern 8hbm_d01 Query structure RMSD= 1.29 A No. of residues = 3 ------- ------- --------------- B 145 GLU matches A 124 GLU B 152 ARG matches A 135 ARG B 153 ARG matches A 209 ARG TRANSFORM 0.1980 -0.5585 -0.8055 0.1046 0.8291 -0.5492 -0.9746 -0.0245 -0.2226 37.540 -11.853 25.035 Match found in 1tz3_c02 PUTATIVE SUGAR KINASE Pattern 1tz3_c02 Query structure RMSD= 1.29 A No. of residues = 3 ------- ------- --------------- A 250 ALA matches A 98 ALA A 251 GLY matches A 99 GLY A 252 ASP matches A 100 ASP TRANSFORM 0.6592 0.1476 0.7373 -0.1173 0.9887 -0.0931 0.7428 0.0251 -0.6691 9.292 -63.917 -8.036 Match found in 8g8j_d00 DNA/RNA_polymerases Pattern 8g8j_d00 Query structure RMSD= 1.29 A No. of residues = 3 ------- ------- --------------- A 322 SER matches A 121 SER A 378 LEU matches A 156 LEU A 382 ARG matches A 135 ARG TRANSFORM 0.6917 -0.0005 0.7222 0.6180 -0.5171 -0.5923 -0.3737 -0.8560 0.3573 -8.224 -72.890 32.567 Match found in 3j9x_d00 A VIRUS THAT INFECTS A HYPERTHERMOPH Pattern 3j9x_d00 Query structure RMSD= 1.29 A No. of residues = 3 ------- ------- --------------- A 71 PRO matches A 103 PRO A 74 ALA matches A 98 ALA A 81 LEU matches A 202 LEU TRANSFORM -0.8582 0.5026 0.1043 0.2729 0.2747 0.9220 -0.4347 -0.8197 0.3730 20.728 2.770 -104.895 Match found in 5h9e_d07 CRYSTAL STRUCTURE OF E. COLI CASCADE Pattern 5h9e_d07 Query structure RMSD= 1.30 A No. of residues = 3 ------- ------- --------------- J 85 TYR matches A 90 TYR J 103 THR matches A 191 THR J 105 GLN matches A 171 GLN TRANSFORM 0.5825 0.7930 -0.1784 0.4241 -0.4837 -0.7656 0.6935 -0.3703 0.6180 -12.223 12.091 -0.542 Match found in 2odj_o00 PORIN D Pattern 2odj_o00 Query structure RMSD= 1.30 A No. of residues = 3 ------- ------- --------------- A 156 HIS matches A 141 HIS A 208 ASP matches A 167 ASP A 296 SER matches A 17 SER TRANSFORM -0.9911 -0.1235 0.0502 0.1329 -0.8854 0.4454 0.0106 -0.4481 -0.8939 191.094 105.023 172.235 Match found in 5w64_d02 RNA POLYMERASE I INITIAL TRANSCRIBIN Pattern 5w64_d02 Query structure RMSD= 1.30 A No. of residues = 3 ------- ------- --------------- A1013 THR matches A 18 THR A1014 SER matches A 17 SER A1018 TYR matches A 187 TYR TRANSFORM 0.1204 -0.8442 0.5223 -0.0214 -0.5282 -0.8488 -0.9925 -0.0910 0.0817 31.095 -83.686 -106.784 Match found in 1xny_c01 PROPIONYL-COA CARBOXYLASE COMPLEX B Pattern 1xny_c01 Query structure RMSD= 1.31 A No. of residues = 3 ------- ------- --------------- A 420 ALA matches A 138 ALA B 182 GLY matches A 102 GLY B 183 GLY matches A 99 GLY TRANSFORM -0.0943 0.3886 0.9166 0.8693 0.4808 -0.1145 0.4852 -0.7860 0.3832 -14.535 7.830 118.932 Match found in 7lri_d01 DNA/RNA_polymerases Pattern 7lri_d01 Query structure RMSD= 1.31 A No. of residues = 3 ------- ------- --------------- A 61 PHE matches A 87 PHE A 63 ILE matches A 9 ILE A 74 LEU matches A 85 LEU TRANSFORM -0.3581 -0.9314 0.0653 -0.2664 0.1689 0.9490 0.8949 -0.3224 0.3086 94.867 132.351 36.250 Match found in 5w66_d01 RNA POLYMERASE I INITIAL TRANSCRIBIN Pattern 5w66_d01 Query structure RMSD= 1.31 A No. of residues = 3 ------- ------- --------------- P 293 ARG matches A 142 ARG P 294 HIS matches A 141 HIS P 295 THR matches A 163 THR TRANSFORM -0.0135 -0.9910 -0.1332 0.3064 -0.1309 0.9429 0.9518 0.0281 -0.3054 220.658 209.328 135.112 Match found in 7zwc_d02 STRUCTURE OF SNAPC:TBP-TFIIA-TFIIB S Pattern 7zwc_d02 Query structure RMSD= 1.31 A No. of residues = 3 ------- ------- --------------- M 283 VAL matches A 137 VAL M 284 THR matches A 205 THR M 287 GLN matches A 136 GLN TRANSFORM 0.4731 -0.7605 -0.4447 0.7979 0.5839 -0.1498 -0.3737 0.2840 -0.8830 -3.454 89.814 80.190 Match found in 1dfo_c04 SERINE HYDROXYMETHYLTRANSFERASE Pattern 1dfo_c04 Query structure RMSD= 1.32 A No. of residues = 3 ------- ------- --------------- A 57 GLU matches A 70 GLU A 226 THR matches A 34 THR A 229 LYS matches A 60 LYS TRANSFORM -0.8497 0.4164 -0.3235 -0.5198 -0.5582 0.6467 -0.0887 -0.7176 -0.6908 165.936 163.861 145.060 Match found in 7ye1_d06 Insert_subdomain_of_RNA_polymerase_a Pattern 7ye1_d06 Query structure RMSD= 1.32 A No. of residues = 3 ------- ------- --------------- C 512 GLU matches A 127 GLU C 516 SER matches A 122 SER C 522 PHE matches A 116 PHE TRANSFORM 0.5680 -0.6034 0.5597 -0.7862 -0.5990 0.1521 -0.2435 0.5264 0.8146 -9.953 53.048 68.423 Match found in 1dfo_c06 SERINE HYDROXYMETHYLTRANSFERASE Pattern 1dfo_c06 Query structure RMSD= 1.32 A No. of residues = 3 ------- ------- --------------- C 57 GLU matches A 70 GLU C 226 THR matches A 34 THR C 229 LYS matches A 60 LYS TRANSFORM 0.6985 0.6075 0.3782 0.6351 -0.7698 0.0638 -0.3299 -0.1956 0.9235 4.468 70.567 54.211 Match found in 1dfo_c05 SERINE HYDROXYMETHYLTRANSFERASE Pattern 1dfo_c05 Query structure RMSD= 1.32 A No. of residues = 3 ------- ------- --------------- B 57 GLU matches A 70 GLU B 226 THR matches A 34 THR B 229 LYS matches A 60 LYS TRANSFORM 0.8521 0.5000 0.1546 0.4023 -0.8147 0.4177 -0.3348 0.2937 0.8953 29.046 16.607 26.258 Match found in 1grc_c02 GLYCINAMIDE RIBONUCLEOTIDE TRANSFORM Pattern 1grc_c02 Query structure RMSD= 1.32 A No. of residues = 3 ------- ------- --------------- A 106 ASN matches A 54 ASN A 108 HIS matches A 40 HIS A 144 ASP matches A 51 ASP TRANSFORM 0.8267 0.4226 -0.3715 -0.3751 -0.0784 -0.9237 0.4195 -0.9029 -0.0937 123.832 177.863 123.879 Match found in 7py6_d02 beta_and_beta-prime_subunits_of_DNA_ Pattern 7py6_d02 Query structure RMSD= 1.32 A No. of residues = 3 ------- ------- --------------- D 426 ALA matches A 42 ALA D 790 THR matches A 18 THR D 791 ALA matches A 198 ALA TRANSFORM 0.8267 0.4226 -0.3715 -0.3751 -0.0784 -0.9237 0.4195 -0.9029 -0.0937 123.832 177.863 123.879 Match found in 7py6_d01 CRYOEM STRUCTURE OF E.COLI RNA POLYM Pattern 7py6_d01 Query structure RMSD= 1.32 A No. of residues = 3 ------- ------- --------------- D 426 ALA matches A 42 ALA D 790 THR matches A 18 THR D 791 ALA matches A 198 ALA TRANSFORM 0.6346 0.4498 -0.6284 -0.6196 0.7821 -0.0659 -0.4618 -0.4312 -0.7751 16.272 72.681 74.157 Match found in 1dfo_c07 SERINE HYDROXYMETHYLTRANSFERASE Pattern 1dfo_c07 Query structure RMSD= 1.33 A No. of residues = 3 ------- ------- --------------- D 57 GLU matches A 70 GLU D 226 THR matches A 34 THR D 229 LYS matches A 60 LYS TRANSFORM 0.7581 -0.3486 -0.5512 -0.6462 -0.5161 -0.5623 0.0884 -0.7824 0.6165 170.620 245.621 281.725 Match found in 8way_d01 beta_and_beta-prime_subunits_of_DNA_ Pattern 8way_d01 Query structure RMSD= 1.33 A No. of residues = 3 ------- ------- --------------- o 461 GLN matches A 171 GLN o 854 THR matches A 163 THR o 855 ALA matches A 143 ALA TRANSFORM 0.6003 0.6223 -0.5024 0.3065 -0.7592 -0.5741 0.7387 -0.1906 0.6465 -3.688 44.060 14.239 Match found in 4ebd_d00 DNA/RNA_polymerases Pattern 4ebd_d00 Query structure RMSD= 1.33 A No. of residues = 3 ------- ------- --------------- A 305 GLU matches A 127 GLU A 343 ARG matches A 118 ARG A 361 GLN matches A 115 GLN TRANSFORM -0.5355 0.8442 -0.0235 0.8383 0.5347 0.1067 -0.1027 -0.0374 0.9940 9.633 13.763 29.022 Match found in 1ddj_c15 PLASMINOGEN Pattern 1ddj_c15 Query structure RMSD= 1.33 A No. of residues = 3 ------- ------- --------------- D 603 HIS matches A 40 HIS D 646 ASP matches A 49 ASP D 739 GLY matches A 44 GLY TRANSFORM -0.6774 -0.0474 -0.7340 -0.0728 -0.9887 0.1311 0.7320 -0.1422 -0.6663 167.953 119.068 105.904 Match found in 7f75_d11 Sigma2_domain_of_RNA_polymerase_sigm Pattern 7f75_d11 Query structure RMSD= 1.33 A No. of residues = 3 ------- ------- --------------- F 270 ILE matches A 48 ILE F 278 LEU matches A 27 LEU F 281 PHE matches A 23 PHE TRANSFORM 0.6951 -0.3560 0.6245 -0.6234 -0.7312 0.2771 -0.3580 0.5819 0.7302 -31.330 49.503 41.937 Match found in 3od8_d00 Glucocorticoid_receptor-like_DNA-bin Pattern 3od8_d00 Query structure RMSD= 1.33 A No. of residues = 3 ------- ------- --------------- D 44 PHE matches A 86 PHE D 48 VAL matches A 104 VAL D 49 PRO matches A 103 PRO TRANSFORM -0.6959 0.1136 0.7091 0.7166 0.1749 0.6752 0.0473 -0.9780 0.2031 -25.475 -89.351 -26.364 Match found in 3v4i_d02 DNA/RNA_polymerases Pattern 3v4i_d02 Query structure RMSD= 1.34 A No. of residues = 3 ------- ------- --------------- C 61 PHE matches A 87 PHE C 63 ILE matches A 9 ILE C 74 LEU matches A 85 LEU TRANSFORM -0.9619 0.2676 -0.0566 0.1369 0.2919 -0.9466 0.2368 0.9183 0.3174 199.324 159.980 176.966 Match found in 7z9k_d01 Type_II_DNA_topoisomerase Pattern 7z9k_d01 Query structure RMSD= 1.34 A No. of residues = 3 ------- ------- --------------- C 32 ARG matches A 47 ARG C 84 ALA matches A 26 ALA C 174 ILE matches A 21 ILE TRANSFORM 0.1047 0.6178 -0.7793 0.6058 -0.6611 -0.4427 0.7887 0.4257 0.4435 0.798 -11.831 35.527 Match found in 6kqm_d02 THERMUS THERMOPHILUS INITIAL TRANSCR Pattern 6kqm_d02 Query structure RMSD= 1.34 A No. of residues = 3 ------- ------- --------------- C 447 ALA matches A 159 ALA D1088 THR matches A 203 THR D1089 ALA matches A 138 ALA TRANSFORM -0.4503 -0.2769 0.8489 0.3686 -0.9235 -0.1057 -0.8133 -0.2653 -0.5179 214.714 150.052 247.133 Match found in 8flj_d02 CAS1-CAS2/3 INTEGRASE AND IHF BOUND Pattern 8flj_d02 Query structure RMSD= 1.34 A No. of residues = 3 ------- ------- --------------- C 25 HIS matches A 106 HIS C 40 ASP matches A 108 ASP C 62 THR matches A 88 THR TRANSFORM -0.2342 0.9718 0.0282 -0.7407 -0.1972 0.6422 -0.6297 -0.1295 -0.7660 -11.961 12.881 -3.043 Match found in 5hp4_d02 PIN_domain-like Pattern 5hp4_d02 Query structure RMSD= 1.34 A No. of residues = 3 ------- ------- --------------- A 54 LEU matches A 152 LEU A 58 TYR matches A 155 TYR A 172 ARG matches A 119 ARG TRANSFORM 0.1659 0.1258 -0.9781 -0.7465 -0.6321 -0.2079 0.6444 -0.7647 0.0110 168.971 155.914 81.216 Match found in 7p3f_d01 STREPTOMYCES COELICOLOR DATP/ATP-LOA Pattern 7p3f_d01 Query structure RMSD= 1.34 A No. of residues = 3 ------- ------- --------------- D 13 VAL matches A 37 VAL D 15 ASP matches A 49 ASP D 17 ARG matches A 47 ARG TRANSFORM 0.6432 0.7583 0.1060 0.7513 -0.6518 0.1037 -0.1477 -0.0130 0.9889 23.527 -23.749 49.033 Match found in 3khh_d00 DNA/RNA_polymerases Pattern 3khh_d00 Query structure RMSD= 1.35 A No. of residues = 3 ------- ------- --------------- B1285 HIS matches A 40 HIS B1295 ILE matches A 21 ILE B1336 ARG matches A 47 ARG TRANSFORM 0.2065 -0.1555 -0.9660 -0.6391 0.7262 -0.2535 -0.7409 -0.6697 -0.0506 30.500 -23.069 -103.184 Match found in 1xny_c00 PROPIONYL-COA CARBOXYLASE COMPLEX B Pattern 1xny_c00 Query structure RMSD= 1.35 A No. of residues = 3 ------- ------- --------------- A 183 GLY matches A 44 GLY B 419 GLY matches A 45 GLY B 420 ALA matches A 42 ALA TRANSFORM -0.1405 0.6387 -0.7565 0.2448 0.7628 0.5986 -0.9593 0.1012 0.2635 85.995 33.319 156.771 Match found in 6n1p_d02 Type_II_DNA_topoisomerase Pattern 6n1p_d02 Query structure RMSD= 1.35 A No. of residues = 3 ------- ------- --------------- G 432 LEU matches A 156 LEU G 433 GLU matches A 157 GLU G 436 LYS matches A 210 LYS TRANSFORM -0.0471 0.7438 -0.6667 0.5547 0.5745 0.6019 -0.8307 0.3415 0.4396 31.322 -26.534 39.837 Match found in 1qrz_c22 PLASMINOGEN Pattern 1qrz_c22 Query structure RMSD= 1.35 A No. of residues = 3 ------- ------- --------------- C 603 HIS matches A 40 HIS C 646 ASP matches A 24 ASP C 739 GLY matches A 44 GLY TRANSFORM -0.7746 0.3544 0.5239 -0.1026 -0.8877 0.4490 -0.6241 -0.2940 -0.7239 37.063 -14.299 47.255 Match found in 4kb1_d00 Ribonuclease_H-like Pattern 4kb1_d00 Query structure RMSD= 1.35 A No. of residues = 3 ------- ------- --------------- B 29 PHE matches A 116 PHE B 71 GLN matches A 115 GLN B 73 GLU matches A 112 GLU TRANSFORM 0.8448 0.0456 0.5332 0.0448 0.9868 -0.1554 0.5332 -0.1551 -0.8316 174.853 182.821 195.189 Match found in 8btg_d03 P-loop_containing_nucleoside_triphos Pattern 8btg_d03 Query structure RMSD= 1.36 A No. of residues = 3 ------- ------- --------------- C 431 ASP matches A 108 ASP C 432 GLU matches A 70 GLU C 433 GLN matches A 68 GLN TRANSFORM 0.6595 0.1525 0.7360 -0.1136 0.9882 -0.1029 0.7430 0.0157 -0.6691 9.492 -63.977 -8.054 Match found in 8gbf_d00 DNA/RNA_polymerases Pattern 8gbf_d00 Query structure RMSD= 1.36 A No. of residues = 3 ------- ------- --------------- A 322 SER matches A 121 SER A 378 LEU matches A 156 LEU A 382 ARG matches A 135 ARG TRANSFORM -0.6631 -0.1482 -0.7337 0.1145 -0.9888 0.0962 0.7397 0.0202 -0.6726 -9.015 63.788 5.646 Match found in 8ski_d00 DNA/RNA_polymerases Pattern 8ski_d00 Query structure RMSD= 1.36 A No. of residues = 3 ------- ------- --------------- A 322 SER matches A 121 SER A 378 LEU matches A 156 LEU A 382 ARG matches A 135 ARG TRANSFORM -0.5369 -0.6106 0.5822 -0.3373 0.7878 0.5153 0.7733 -0.0803 0.6289 1.741 -43.392 13.285 Match found in 3epg_d00 DNA/RNA_polymerases Pattern 3epg_d00 Query structure RMSD= 1.36 A No. of residues = 3 ------- ------- --------------- A 305 GLU matches A 127 GLU A 343 ARG matches A 118 ARG A 361 GLN matches A 115 GLN TRANSFORM 0.6176 0.3898 0.6831 -0.4436 0.8899 -0.1067 0.6495 0.2372 -0.7225 -48.022 7.991 16.031 Match found in 5k1y_d02 "Winged_helix"_DNA-binding_domain Pattern 5k1y_d02 Query structure RMSD= 1.36 A No. of residues = 3 ------- ------- --------------- E 41 TYR matches A 204 TYR E 42 GLN matches A 136 GLN E 43 THR matches A 205 THR TRANSFORM 0.4221 -0.1097 -0.8999 -0.3575 -0.9323 -0.0540 0.8331 -0.3445 0.4328 71.727 41.656 -6.977 Match found in 4pzi_d00 ZINC FINGER REGION OF MLL2 IN COMPLE Pattern 4pzi_d00 Query structure RMSD= 1.36 A No. of residues = 3 ------- ------- --------------- A 962 ARG matches A 119 ARG A 997 LYS matches A 67 LYS A 998 GLN matches A 68 GLN TRANSFORM 0.7567 -0.1085 -0.6447 -0.5904 -0.5367 -0.6028 0.2806 -0.8368 0.4702 -68.222 22.441 -41.321 Match found in 1qrz_c21 PLASMINOGEN Pattern 1qrz_c21 Query structure RMSD= 1.37 A No. of residues = 3 ------- ------- --------------- B 603 HIS matches A 40 HIS B 646 ASP matches A 24 ASP B 739 GLY matches A 44 GLY TRANSFORM -0.6769 -0.1201 -0.7263 0.3679 -0.9098 -0.1924 0.6376 0.3974 -0.6599 58.771 -2.713 -16.350 Match found in 2bhg_c02 FOOT-AND-MOUTH DISEASE VIRUS 3C PROT Pattern 2bhg_c02 Query structure RMSD= 1.38 A No. of residues = 3 ------- ------- --------------- B 46 HIS matches A 141 HIS B 163 ALA matches A 160 ALA B 182 SER matches A 162 SER TRANSFORM -0.0154 0.7038 -0.7102 0.9776 0.1599 0.1372 -0.2101 0.6922 0.6905 -19.939 8.775 -15.809 Match found in 1ddj_c13 PLASMINOGEN Pattern 1ddj_c13 Query structure RMSD= 1.39 A No. of residues = 3 ------- ------- --------------- B 603 HIS matches A 106 HIS B 646 ASP matches A 108 ASP B 739 GLY matches A 170 GLY TRANSFORM 0.7129 -0.3453 0.6104 -0.6109 -0.7332 0.2987 -0.3445 0.5858 0.7336 -31.863 49.202 42.221 Match found in 3oda_d02 Glucocorticoid_receptor-like_DNA-bin Pattern 3oda_d02 Query structure RMSD= 1.39 A No. of residues = 3 ------- ------- --------------- D 44 PHE matches A 86 PHE D 48 VAL matches A 104 VAL D 49 PRO matches A 103 PRO TRANSFORM -0.2147 0.0247 -0.9764 -0.8606 0.4680 0.2011 -0.4619 -0.8834 0.0792 59.702 25.697 -2.081 Match found in 4gg4_d00 Thiolase-like Pattern 4gg4_d00 Query structure RMSD= 1.39 A No. of residues = 3 ------- ------- --------------- A 301 ASP matches A 51 ASP A 335 ASP matches A 49 ASP A 369 ASP matches A 24 ASP TRANSFORM -0.5465 -0.8001 0.2473 -0.0702 -0.2505 -0.9656 -0.8345 0.5450 -0.0807 150.405 141.221 198.440 Match found in 7oz3_d02 TrkA_C-terminal_domain-like Pattern 7oz3_d02 Query structure RMSD= 1.39 A No. of residues = 3 ------- ------- --------------- D 39 THR matches A 203 THR D 48 SER matches A 200 SER D 49 PRO matches A 201 PRO TRANSFORM 0.4891 -0.8253 -0.2823 -0.5199 -0.5357 0.6654 0.7004 0.1787 0.6910 57.195 37.649 76.848 Match found in 7xx7_d01 CRYSTAL STRUCTURE OF NUCLEOSOME-H1X Pattern 7xx7_d01 Query structure RMSD= 1.40 A No. of residues = 3 ------- ------- --------------- D 17 ALA matches A 138 ALA D 18 VAL matches A 137 VAL D 19 THR matches A 205 THR TRANSFORM 0.7896 -0.0916 -0.6068 -0.5362 -0.5838 -0.6096 0.2984 -0.8067 0.5101 -42.049 19.518 -3.691 Match found in 1qrz_c20 PLASMINOGEN Pattern 1qrz_c20 Query structure RMSD= 1.41 A No. of residues = 3 ------- ------- --------------- A 603 HIS matches A 40 HIS A 646 ASP matches A 24 ASP A 739 GLY matches A 44 GLY TRANSFORM -0.8496 -0.4320 0.3027 -0.5233 0.6178 -0.5869 -0.0666 0.6570 0.7509 36.932 62.749 -13.710 Match found in 1rgq_c01 NS4A PEPTIDE Pattern 1rgq_c01 Query structure RMSD= 1.41 A No. of residues = 3 ------- ------- --------------- B 60 HIS matches A 40 HIS B 84 ASP matches A 51 ASP B 140 GLY matches A 45 GLY TRANSFORM -0.9274 0.2541 0.2745 0.1242 -0.4831 0.8667 -0.3528 -0.8379 -0.4165 165.362 104.797 134.809 Match found in 7f75_d11 Sigma2_domain_of_RNA_polymerase_sigm Pattern 7f75_d11 Query structure RMSD= 1.41 A No. of residues = 3 ------- ------- --------------- F 270 ILE matches A 9 ILE F 278 LEU matches A 85 LEU F 281 PHE matches A 87 PHE TRANSFORM 0.6843 -0.3209 0.6548 0.5592 0.8072 -0.1887 0.4680 -0.4953 -0.7319 -37.344 50.583 83.417 Match found in 3oda_d06 Glucocorticoid_receptor-like_DNA-bin Pattern 3oda_d06 Query structure RMSD= 1.41 A No. of residues = 3 ------- ------- --------------- H 44 PHE matches A 86 PHE H 48 VAL matches A 104 VAL H 49 PRO matches A 103 PRO TRANSFORM 0.5932 -0.0757 -0.8015 0.6214 -0.5899 0.5156 0.5118 0.8039 0.3029 -11.414 -48.196 46.584 Match found in 6kqm_d02 THERMUS THERMOPHILUS INITIAL TRANSCR Pattern 6kqm_d02 Query structure RMSD= 1.41 A No. of residues = 3 ------- ------- --------------- C 447 ALA matches A 198 ALA D1088 THR matches A 15 THR D1089 ALA matches A 12 ALA TRANSFORM 0.8149 -0.5437 -0.2006 0.3885 0.7693 -0.5072 -0.4301 -0.3354 -0.8382 202.163 229.041 260.629 Match found in 5vvr_d02 P-loop_containing_nucleoside_triphos Pattern 5vvr_d02 Query structure RMSD= 1.41 A No. of residues = 3 ------- ------- --------------- A 448 PRO matches A 201 PRO A 831 THR matches A 15 THR A 832 ALA matches A 12 ALA TRANSFORM 0.1399 0.8523 0.5040 -0.8456 0.3677 -0.3870 0.5152 0.3721 -0.7721 31.274 -64.830 -145.661 Match found in 1xny_c01 PROPIONYL-COA CARBOXYLASE COMPLEX B Pattern 1xny_c01 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- A 420 ALA matches A 172 ALA B 182 GLY matches A 165 GLY B 183 GLY matches A 170 GLY TRANSFORM -0.1435 0.4235 -0.8944 0.9444 0.3287 0.0042 -0.2958 0.8441 0.4472 177.717 84.574 162.915 Match found in 5w64_d02 RNA POLYMERASE I INITIAL TRANSCRIBIN Pattern 5w64_d02 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- A1013 THR matches A 15 THR A1014 SER matches A 17 SER A1018 TYR matches A 189 TYR TRANSFORM 0.7462 0.0557 -0.6634 -0.5012 -0.6088 -0.6150 0.4381 -0.7914 0.4263 -6.631 31.878 -48.996 Match found in 6mig_d00 DNA/RNA_polymerases Pattern 6mig_d00 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- A 99 LEU matches A 27 LEU A 114 ASP matches A 24 ASP A 116 ARG matches A 47 ARG TRANSFORM 0.1322 -0.4321 -0.8921 -0.3224 -0.8698 0.3735 0.9373 -0.2382 0.2543 31.457 -36.544 4.500 Match found in 3rzd_d00 RNA POLYMERASE II INITIATION COMPLEX Pattern 3rzd_d00 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- A 448 PRO matches A 201 PRO A 831 THR matches A 15 THR A 832 ALA matches A 12 ALA TRANSFORM -0.9081 -0.0430 -0.4166 0.0492 -0.9988 -0.0040 0.4159 0.0241 -0.9091 145.458 52.442 107.567 Match found in 5n8o_d00 Origin_of_replication-binding_domain Pattern 5n8o_d00 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- A 333 GLN matches A 55 GLN A 832 SER matches A 52 SER A 833 PHE matches A 38 PHE TRANSFORM -0.6230 0.4192 -0.6604 0.3691 -0.5868 -0.7207 0.6897 0.6927 -0.2108 243.703 230.467 263.762 Match found in 8tvy_d04 P-loop_containing_nucleoside_triphos Pattern 8tvy_d04 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- M 478 ASP matches A 123 ASP M 479 SER matches A 121 SER M 480 GLU matches A 127 GLU TRANSFORM -0.6230 0.4192 -0.6604 0.3691 -0.5868 -0.7207 0.6897 0.6927 -0.2108 243.703 230.467 263.762 Match found in 8tvy_d02 P-loop_containing_nucleoside_triphos Pattern 8tvy_d02 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- M 478 ASP matches A 123 ASP M 479 SER matches A 121 SER M 480 GLU matches A 127 GLU TRANSFORM -0.0737 -0.5282 -0.8459 0.2731 0.8051 -0.5265 -0.9592 0.2698 -0.0849 59.236 120.272 117.532 Match found in 1zvv_d00 Periplasmic_binding_protein-like_I Pattern 1zvv_d00 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- A 15 SER matches A 4 SER A 17 ALA matches A 7 ALA A 21 ARG matches A 10 ARG TRANSFORM -0.6333 0.7591 -0.1503 -0.6739 -0.4455 0.5894 -0.3805 -0.4746 -0.7938 24.066 104.138 34.017 Match found in 1ok4_c04 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS Pattern 1ok4_c04 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- E 24 ASP matches A 83 ASP E 146 TYR matches A 187 TYR E 177 LYS matches A 14 LYS TRANSFORM -0.2957 0.9087 -0.2948 0.9406 0.3308 0.0762 -0.1668 0.2548 0.9525 18.984 79.998 28.996 Match found in 1ok4_c01 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS Pattern 1ok4_c01 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- B 24 ASP matches A 83 ASP B 146 TYR matches A 187 TYR B 177 LYS matches A 14 LYS TRANSFORM -0.2172 -0.4232 -0.8796 0.5161 -0.8147 0.2645 0.8285 0.3965 -0.3954 158.150 102.828 114.097 Match found in 6m6c_d02 beta_and_beta-prime_subunits_of_DNA_ Pattern 6m6c_d02 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- D 706 PRO matches A 201 PRO D1088 THR matches A 15 THR D1089 ALA matches A 12 ALA TRANSFORM -0.2172 -0.4232 -0.8796 0.5161 -0.8147 0.2645 0.8285 0.3965 -0.3954 158.150 102.828 114.097 Match found in 6m6c_d01 CRYOEM STRUCTURE OF THERMUS THERMOPH Pattern 6m6c_d01 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- D 706 PRO matches A 201 PRO D1088 THR matches A 15 THR D1089 ALA matches A 12 ALA TRANSFORM 0.3213 0.0828 0.9433 0.2883 0.9403 -0.1808 0.9020 -0.3301 -0.2783 11.493 98.154 5.063 Match found in 2amg_c02 1,4-ALPHA-D-GLUCAN MALTOTETRAHYDROLA Pattern 2amg_c02 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- 193 ASP matches A 123 ASP 219 GLU matches A 127 GLU 294 ASP matches A 128 ASP TRANSFORM -0.1059 0.5276 -0.8428 0.1862 -0.8221 -0.5380 0.9768 0.2140 0.0112 109.625 52.780 20.929 Match found in 1lxa_c00 acyl-[acyl-carrier-protein]-UDP-N-ac Pattern 1lxa_c00 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- A 125 HIS matches A 40 HIS A 126 ASP matches A 51 ASP A 143 GLY matches A 56 GLY TRANSFORM -0.3219 0.5311 0.7838 0.3870 -0.6817 0.6209 -0.8641 -0.5032 -0.0139 164.551 147.083 159.740 Match found in 8syi_d02 CYANOBACTERIAL RNAP-EC Pattern 8syi_d02 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- G 29 ALA matches A 7 ALA G 30 SER matches A 4 SER G 105 ILE matches A 9 ILE TRANSFORM 0.3920 -0.7900 0.4713 -0.4378 0.2903 0.8509 0.8091 0.5399 0.2321 -78.871 118.523 13.263 Match found in 1ok4_c06 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS Pattern 1ok4_c06 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- G 24 ASP matches A 83 ASP G 146 TYR matches A 187 TYR G 177 LYS matches A 14 LYS TRANSFORM 0.4293 -0.3138 -0.8469 -0.0477 -0.9443 0.3257 0.9019 0.0994 0.4204 -24.820 -2.923 -16.547 Match found in 5k1y_d02 "Winged_helix"_DNA-binding_domain Pattern 5k1y_d02 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- E 41 TYR matches A 164 TYR E 42 GLN matches A 171 GLN E 43 THR matches A 191 THR TRANSFORM -0.0075 0.7668 -0.6418 0.5816 0.5255 0.6210 -0.8134 0.3686 0.4499 -24.144 -28.650 77.836 Match found in 1qrz_c23 PLASMINOGEN Pattern 1qrz_c23 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- D 603 HIS matches A 40 HIS D 646 ASP matches A 24 ASP D 739 GLY matches A 44 GLY TRANSFORM 0.6009 -0.6990 0.3876 0.5496 0.7135 0.4346 0.5803 0.0481 -0.8129 -81.808 103.554 17.842 Match found in 1ok4_c05 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS Pattern 1ok4_c05 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- F 24 ASP matches A 83 ASP F 146 TYR matches A 187 TYR F 177 LYS matches A 14 LYS TRANSFORM 0.7471 -0.3622 0.5574 -0.5878 -0.7515 0.2996 -0.3104 0.5515 0.7743 -7.739 38.938 83.608 Match found in 3oda_d04 Glucocorticoid_receptor-like_DNA-bin Pattern 3oda_d04 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- F 44 PHE matches A 86 PHE F 48 VAL matches A 104 VAL F 49 PRO matches A 103 PRO TRANSFORM 0.6805 -0.4733 -0.5593 0.1645 -0.6452 0.7461 0.7140 0.5998 0.3612 -15.560 -8.933 -30.577 Match found in 6mig_d00 DNA/RNA_polymerases Pattern 6mig_d00 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- A 99 LEU matches A 50 LEU A 114 ASP matches A 49 ASP A 116 ARG matches A 47 ARG TRANSFORM -0.9669 0.2530 -0.0320 0.1141 0.3169 -0.9416 0.2280 0.9141 0.3353 199.029 161.226 176.779 Match found in 7z9m_d00 Type_II_DNA_topoisomerase Pattern 7z9m_d00 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- C 32 ARG matches A 47 ARG C 84 ALA matches A 26 ALA C 174 ILE matches A 21 ILE TRANSFORM 0.4449 -0.8909 0.0917 -0.2909 -0.2406 -0.9260 -0.8470 -0.3853 0.3662 -79.258 117.891 38.698 Match found in 1ok4_c08 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS Pattern 1ok4_c08 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- I 24 ASP matches A 83 ASP I 146 TYR matches A 187 TYR I 177 LYS matches A 14 LYS TRANSFORM -0.3332 -0.9024 -0.2732 -0.6204 -0.0083 0.7843 0.7100 -0.4308 0.5570 22.079 72.303 33.224 Match found in 1ddj_c14 PLASMINOGEN Pattern 1ddj_c14 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- C 603 HIS matches A 106 HIS C 646 ASP matches A 108 ASP C 739 GLY matches A 170 GLY TRANSFORM 0.8624 -0.5038 -0.0491 0.4467 0.8031 -0.3943 -0.2381 -0.3181 -0.9177 197.426 222.158 257.678 Match found in 5vvs_d00 RNA POL II ELONGATION COMPLEX Pattern 5vvs_d00 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- A 448 PRO matches A 201 PRO A 831 THR matches A 15 THR A 832 ALA matches A 12 ALA TRANSFORM 0.4403 -0.4432 -0.7809 -0.8961 -0.2711 -0.3514 0.0560 -0.8545 0.5165 132.131 161.599 131.299 Match found in 7xg2_d02 CRYOEM STRUCTURE OF TYPE IV-A NTS-NI Pattern 7xg2_d02 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- A 175 TYR matches A 204 TYR A 178 ARG matches A 135 ARG A 182 ALA matches A 98 ALA TRANSFORM 0.6324 -0.7587 0.1565 0.6292 0.3852 -0.6751 -0.4519 -0.5254 -0.7209 -82.027 103.718 33.648 Match found in 1ok4_c09 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS Pattern 1ok4_c09 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- J 24 ASP matches A 83 ASP J 146 TYR matches A 187 TYR J 177 LYS matches A 14 LYS TRANSFORM -0.6106 0.6906 -0.3876 -0.4875 -0.7135 -0.5033 0.6242 0.1184 -0.7723 23.866 102.171 18.624 Match found in 1ok4_c03 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS Pattern 1ok4_c03 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- D 24 ASP matches A 83 ASP D 146 TYR matches A 187 TYR D 177 LYS matches A 14 LYS TRANSFORM -0.4307 0.8978 -0.0919 0.2120 0.1997 0.9566 -0.8772 -0.3925 0.2764 20.734 90.124 40.539 Match found in 1ok4_c00 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS Pattern 1ok4_c00 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- A 24 ASP matches A 83 ASP A 146 TYR matches A 187 TYR A 177 LYS matches A 14 LYS TRANSFORM -0.4624 -0.4071 -0.7877 0.8134 -0.5485 -0.1940 0.3531 0.7304 -0.5847 188.248 175.692 201.437 Match found in 6xh8_d05 cAMP-binding_domain-like Pattern 6xh8_d05 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- F 394 TYR matches A 139 TYR F 437 GLN matches A 145 GLN F 443 ILE matches A 107 ILE TRANSFORM 0.5624 0.4457 0.6965 0.6186 0.3322 -0.7120 0.5487 -0.8313 0.0889 -35.542 -23.225 44.733 Match found in 6kqm_d02 THERMUS THERMOPHILUS INITIAL TRANSCR Pattern 6kqm_d02 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- C 447 ALA matches A 198 ALA D1088 THR matches A 191 THR D1089 ALA matches A 190 ALA TRANSFORM 0.6689 -0.3068 0.6770 0.5343 0.8317 -0.1511 0.5167 -0.4628 -0.7203 -36.596 50.582 81.444 Match found in 3od8_d04 Glucocorticoid_receptor-like_DNA-bin Pattern 3od8_d04 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- H 44 PHE matches A 86 PHE H 48 VAL matches A 104 VAL H 49 PRO matches A 103 PRO TRANSFORM -0.0795 -0.2037 -0.9758 0.4076 -0.9000 0.1547 0.9097 0.3854 -0.1546 14.499 -48.871 -40.365 Match found in 3ebc_d03 Restriction_endonuclease-like Pattern 3ebc_d03 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- A 199 TYR matches A 164 TYR B 109 GLN matches A 25 GLN B 110 ASN matches A 28 ASN TRANSFORM -0.3972 0.7883 -0.4699 0.5131 -0.2338 -0.8259 0.7609 0.5691 0.3116 20.543 87.249 15.233 Match found in 1ok4_c02 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS Pattern 1ok4_c02 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- C 24 ASP matches A 83 ASP C 146 TYR matches A 187 TYR C 177 LYS matches A 14 LYS TRANSFORM 0.2934 -0.9128 0.2840 -0.9537 -0.3000 0.0213 -0.0658 0.2771 0.9586 -77.150 126.998 25.981 Match found in 1ok4_c07 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS Pattern 1ok4_c07 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- H 24 ASP matches A 83 ASP H 146 TYR matches A 187 TYR H 177 LYS matches A 14 LYS TRANSFORM 0.6257 -0.1405 -0.7673 0.7124 -0.2978 0.6355 0.3178 0.9442 0.0863 132.893 132.353 177.118 Match found in 6cnf_d03 TATA-box_binding_protein-like Pattern 6cnf_d03 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- R 72 ALA matches A 26 ALA R 73 LEU matches A 27 LEU R 75 SER matches A 31 SER TRANSFORM -0.0262 0.5798 -0.8143 -0.9526 0.2326 0.1962 -0.3032 -0.7808 -0.5462 51.009 -40.662 35.352 Match found in 3j9x_d00 A VIRUS THAT INFECTS A HYPERTHERMOPH Pattern 3j9x_d00 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- A 71 PRO matches A 58 PRO A 74 ALA matches A 59 ALA A 81 LEU matches A 62 LEU TRANSFORM 0.1919 -0.9740 -0.1204 -0.3822 -0.1872 0.9049 0.9039 0.1277 0.4082 121.568 9.655 -46.506 Match found in 6jup_d00 DNA/RNA_polymerases Pattern 6jup_d00 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- A 246 GLU matches A 124 GLU A 285 ARG matches A 119 ARG A 299 THR matches A 73 THR TRANSFORM -0.2750 0.9613 0.0137 0.8738 0.2440 0.4206 -0.4010 -0.1277 0.9071 54.600 -20.777 45.560 Match found in 6amo_d00 DNA/RNA_polymerases Pattern 6amo_d00 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- A 94 ILE matches A 21 ILE A 161 GLN matches A 171 GLN A 183 TYR matches A 189 TYR TRANSFORM -0.6812 -0.1317 -0.7201 0.1649 -0.9860 0.0244 0.7133 0.1021 -0.6934 -8.361 63.251 -6.620 Match found in 7m7o_d00 DNA/RNA_polymerases Pattern 7m7o_d00 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- A 322 SER matches A 121 SER A 378 LEU matches A 156 LEU A 382 ARG matches A 135 ARG TRANSFORM -0.1750 -0.4222 -0.8894 -0.6805 -0.6010 0.4192 0.7115 -0.6786 0.1821 115.288 167.530 107.482 Match found in 8b1u_d02 P-loop_containing_nucleoside_triphos Pattern 8b1u_d02 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- D 241 HIS matches A 106 HIS D 247 GLN matches A 68 GLN D 248 PRO matches A 110 PRO TRANSFORM 0.8377 0.4379 0.3262 -0.5429 0.6028 0.5847 -0.0594 0.6669 -0.7427 -18.656 55.438 14.257 Match found in 2v9w_d00 DNA/RNA_polymerases Pattern 2v9w_d00 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- A 32 VAL matches A 137 VAL A 42 ALA matches A 138 ALA A 44 ALA matches A 98 ALA TRANSFORM -0.4692 0.8660 -0.1731 0.5226 0.1143 -0.8449 0.7118 0.4869 0.5062 41.019 -5.045 121.558 Match found in 1pjh_c02 ENOYL-COA ISOMERASE; ECI1P Pattern 1pjh_c02 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- C 70 ALA matches A 59 ALA C 126 LEU matches A 39 LEU C 158 GLU matches A 57 GLU TRANSFORM 0.9749 0.0985 -0.1996 0.2197 -0.5700 0.7917 0.0358 0.8157 0.5774 141.629 141.640 157.176 Match found in 6vvy_d10 beta_and_beta-prime_subunits_of_DNA_ Pattern 6vvy_d10 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- D 502 PRO matches A 201 PRO D 867 THR matches A 15 THR D 868 ALA matches A 12 ALA TRANSFORM 0.9749 0.0985 -0.1996 0.2197 -0.5700 0.7917 0.0358 0.8157 0.5774 141.629 141.640 157.176 Match found in 6vvy_d08 MYCOBACTERIUM TUBERCULOSIS WT RNAP T Pattern 6vvy_d08 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- D 502 PRO matches A 201 PRO D 867 THR matches A 15 THR D 868 ALA matches A 12 ALA TRANSFORM 0.0403 -0.0130 -0.9991 0.8476 0.5299 0.0273 -0.5291 0.8480 -0.0324 175.393 186.972 202.958 Match found in 6x2n_d02 MFD-BOUND E.COLI RNA POLYMERASE ELON Pattern 6x2n_d02 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- J 46 TYR matches A 164 TYR J 255 LEU matches A 149 LEU J 259 ARG matches A 142 ARG TRANSFORM -0.7218 -0.6398 -0.2639 0.6898 -0.6336 -0.3504 -0.0570 0.4350 -0.8986 51.601 -33.218 37.777 Match found in 4enk_d00 Methylated_DNA-protein_cysteine_meth Pattern 4enk_d00 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- A 39 ARG matches A 181 ARG A 40 GLN matches A 182 GLN A 43 GLN matches A 183 GLN TRANSFORM 0.9776 -0.0306 0.2082 -0.2097 -0.2215 0.9523 -0.0169 0.9747 0.2230 -33.847 -36.787 2.852 Match found in 3ebc_d03 Restriction_endonuclease-like Pattern 3ebc_d03 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- A 199 TYR matches A 90 TYR B 109 GLN matches A 55 GLN B 110 ASN matches A 54 ASN TRANSFORM 0.8309 -0.3826 0.4040 -0.2226 0.4369 0.8715 0.5100 0.8141 -0.2779 144.526 168.643 152.994 Match found in 6xl5_d09 cAMP-binding_domain-like Pattern 6xl5_d09 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- C 542 ARG matches A 209 ARG C 567 PRO matches A 161 PRO D 790 THR matches A 203 THR TRANSFORM -0.4182 -0.0451 -0.9072 -0.7697 0.5480 0.3276 -0.4824 -0.8353 0.2639 169.737 152.334 90.086 Match found in 7ecw_d00 THE CSY-ACRIF14-DSDNA COMPLEX organ Pattern 7ecw_d00 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- B 94 THR matches A 20 THR B 97 ILE matches A 9 ILE H 231 LEU matches A 39 LEU TRANSFORM 0.8144 -0.4748 0.3337 -0.0465 -0.6265 -0.7781 -0.5785 -0.6181 0.5323 168.514 118.166 168.459 Match found in 4q10_d01 PIN_domain-like Pattern 4q10_d01 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- B 36 TYR matches A 187 TYR B 37 GLN matches A 188 GLN B 41 ALA matches A 198 ALA TRANSFORM 0.1927 -0.2111 0.9583 0.9107 0.4022 -0.0945 0.3655 -0.8909 -0.2698 160.994 189.635 180.883 Match found in 6z9s_d02 beta_and_beta-prime_subunits_of_DNA_ Pattern 6z9s_d02 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- Y 427 PRO matches A 201 PRO Y 790 THR matches A 15 THR Y 791 ALA matches A 12 ALA TRANSFORM -0.6452 -0.1523 -0.7487 0.1322 -0.9874 0.0869 0.7525 0.0429 -0.6572 -9.053 63.613 -7.850 Match found in 4j9n_d00 DNA/RNA_polymerases Pattern 4j9n_d00 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- A 322 SER matches A 121 SER A 378 LEU matches A 156 LEU A 382 ARG matches A 135 ARG TRANSFORM -0.2561 0.6849 0.6822 0.9646 0.1346 0.2269 -0.0636 -0.7161 0.6951 100.287 -5.753 -29.405 Match found in 7fvt_d04 Type_II_DNA_topoisomerase Pattern 7fvt_d04 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- A1084 SER matches A 194 SER A1085 SER matches A 193 SER B1122 ARG matches A 166 ARG TRANSFORM -0.9916 -0.1264 -0.0290 0.1290 -0.9848 -0.1160 0.0139 0.1187 -0.9928 73.039 62.231 22.578 Match found in 4wqs_d00 THERMUS THERMOPHILUS RNA POLYMERASE Pattern 4wqs_d00 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- C 422 ARG matches A 47 ARG C 423 ALA matches A 42 ALA D1093 TYR matches A 89 TYR TRANSFORM -0.1285 -0.4419 0.8878 0.8391 -0.5256 -0.1401 -0.5285 -0.7270 -0.4383 195.832 137.120 210.235 Match found in 8ozd_d02 Toll/Interleukin_receptor_TIR_domain Pattern 8ozd_d02 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- D 245 PHE matches A 116 PHE D 248 ILE matches A 107 ILE D 251 HIS matches A 106 HIS TRANSFORM 0.7009 -0.3234 -0.6357 0.1948 -0.7706 0.6068 0.6861 0.5492 0.4772 -51.290 -29.041 125.291 Match found in 1pjh_c01 ENOYL-COA ISOMERASE; ECI1P Pattern 1pjh_c01 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- B 70 ALA matches A 59 ALA B 126 LEU matches A 39 LEU B 158 GLU matches A 57 GLU TRANSFORM 0.8230 -0.4661 -0.3247 -0.4891 -0.8721 0.0122 0.2889 -0.1488 0.9457 102.868 133.771 59.751 Match found in 7ecw_d00 THE CSY-ACRIF14-DSDNA COMPLEX organ Pattern 7ecw_d00 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- B 94 THR matches A 191 THR B 97 ILE matches A 21 ILE H 231 LEU matches A 19 LEU TRANSFORM 0.4011 0.0473 0.9148 -0.9087 0.1465 0.3909 0.1155 0.9881 -0.1018 149.701 173.352 163.562 Match found in 8t79_d00 SPRY-CAS9:GRNA COMPLEX BOUND TO NON- Pattern 8t79_d00 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- A1136 TRP matches A 66 TRP A1219 GLN matches A 145 GLN A1337 ARG matches A 142 ARG TRANSFORM 0.1070 0.4221 -0.9002 -0.8587 0.4956 0.1303 -0.5012 -0.7591 -0.4155 169.254 227.968 209.001 Match found in 8ozd_d01 Ribonuclease_H-like Pattern 8ozd_d01 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- B 245 PHE matches A 116 PHE B 248 ILE matches A 107 ILE B 251 HIS matches A 106 HIS TRANSFORM 0.1070 0.4221 -0.9002 -0.8587 0.4956 0.1303 -0.5012 -0.7591 -0.4155 169.254 227.968 209.001 Match found in 8ozd_d00 Toll/Interleukin_receptor_TIR_domain Pattern 8ozd_d00 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- B 245 PHE matches A 116 PHE B 248 ILE matches A 107 ILE B 251 HIS matches A 106 HIS ************************************************* user.SUMS ******************************************************** 3tu8_o00 BURKHOLDERIA LETHAL FACTOR 1 (BLF1) : 0.00 < 2f9z_c01 PROTEIN (CHEMOTAXIS METHYLATION PROT : 0.49 < 2f9z_c00 PROTEIN (CHEMOTAXIS METHYLATION PROT : 0.54 < 5c4j_d01 beta_and_beta-prime_subunits_of_DNA_ : 0.78 < 7xx7_d01 CRYSTAL STRUCTURE OF NUCLEOSOME-H1X : 0.86 < 7eqg_d05 STRUCTURE OF CSY-ACRIF5 organism=PS : 0.86 < 6kql_d04 Sigma2_domain_of_RNA_polymerase_sigm : 0.86 < 1xny_c00 PROPIONYL-COA CARBOXYLASE COMPLEX B : 0.87 < 1q6l_c05 3-KETO-L-GULONATE 6-PHOSPHATE DECARB : 0.90 < 7z9m_d00 Type_II_DNA_topoisomerase : 0.91 < 1xny_c01 PROPIONYL-COA CARBOXYLASE COMPLEX B : 0.91 < 7z9k_d01 Type_II_DNA_topoisomerase : 0.95 < 1qrz_c22 PLASMINOGEN : 0.97 < 1xny_c00 PROPIONYL-COA CARBOXYLASE COMPLEX B : 0.99 < 1qrz_c21 PLASMINOGEN : 1.00 < 1f6d_c02 UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE : 1.02 < 1xny_c00 PROPIONYL-COA CARBOXYLASE COMPLEX B : 1.03 < 1tz3_c03 PUTATIVE SUGAR KINASE : 1.03 < 1lij_c01 ADENOSINE KINASE : 1.04 < 1qrz_c20 PLASMINOGEN : 1.06 < 1tz3_c02 PUTATIVE SUGAR KINASE : 1.06 < 8k28_d03 ICP1 CSY-DSDNA COMPLEX (FORM 1) : 1.06 < 7yul_d00 CRYSTAL STRUCTURE OF HUMAN BEND6 BEN : 1.07 < 1qrz_c23 PLASMINOGEN : 1.08 < 1qho_c07 ALPHA-AMYLASE : 1.09 < 1lij_c01 ADENOSINE KINASE : 1.10 < 1grc_c02 GLYCINAMIDE RIBONUCLEOTIDE TRANSFORM : 1.11 < 7py6_d01 CRYOEM STRUCTURE OF E.COLI RNA POLYM : 1.11 < 7py6_d02 beta_and_beta-prime_subunits_of_DNA_ : 1.11 < 5bs3_d01 Type_II_DNA_topoisomerase : 1.11 < 1tz3_c03 PUTATIVE SUGAR KINASE : 1.12 < 3kqu_d02 P-loop_containing_nucleoside_triphos : 1.13 < 1tz3_c02 PUTATIVE SUGAR KINASE : 1.13 < 4wqs_d00 THERMUS THERMOPHILUS RNA POLYMERASE : 1.14 < 8tvy_d04 P-loop_containing_nucleoside_triphos : 1.14 < 8tvy_d02 P-loop_containing_nucleoside_triphos : 1.14 < 3ugm_d01 Thiolase-like : 1.15 < 2gb7_d01 Restriction_endonuclease-like : 1.16 < 5fhd_d01 P-loop_containing_nucleoside_triphos : 1.17 < 2fvq_d00 DNA/RNA_polymerases : 1.18 < 1be1_c02 GLUTAMATE MUTASE : 1.18 < 5hp4_d02 PIN_domain-like : 1.18 < 7zwc_d02 STRUCTURE OF SNAPC:TBP-TFIIA-TFIIB S : 1.18 < 2fvs_d00 DNA/RNA_polymerases : 1.20 < 4kb1_d00 Ribonuclease_H-like : 1.21 < 3v4i_d01 DNA/RNA_polymerases : 1.22 < 3v4i_d00 DNA/RNA_polymerases : 1.22 < 7f75_d11 Sigma2_domain_of_RNA_polymerase_sigm : 1.23 < 7khb_d06 ESCHERICHIA COLI RNA POLYMERASE AND : 1.23 < 2odj_o00 PORIN D : 1.24 < 8btg_d03 P-loop_containing_nucleoside_triphos : 1.25 < 7z4d_d01 CRYSTAL STRUCTURE OF SPCAS9 BOUND TO : 1.25 < 8ozd_d02 Toll/Interleukin_receptor_TIR_domain : 1.25 < 7xg0_d07 CRYOEM STRUCTURE OF TYPE IV-A CSF-CR : 1.25 < 6kqm_d03 THERMUS THERMOPHILUS INITIAL TRANSCR : 1.26 < 7lri_d01 DNA/RNA_polymerases : 1.26 < 3epg_d00 DNA/RNA_polymerases : 1.26 < 8ozd_d01 Ribonuclease_H-like : 1.26 < 8ozd_d00 Toll/Interleukin_receptor_TIR_domain : 1.26 < 5tkz_d03 RNA-binding_domain,_RBD : 1.26 < 7n4e_d05 ESCHERICHIA COLI SIGMA 70-DEPENDENT : 1.26 < 4enk_d00 Methylated_DNA-protein_cysteine_meth : 1.27 < 7yul_d00 CRYSTAL STRUCTURE OF HUMAN BEND6 BEN : 1.27 < 3v4i_d02 DNA/RNA_polymerases : 1.27 < 3v4i_d01 DNA/RNA_polymerases : 1.27 < 3v4i_d00 DNA/RNA_polymerases : 1.27 < 2i0q_d02 Nucleic_acid-binding_proteins : 1.27 < 2i0q_d06 Nucleic_acid-binding_proteins : 1.27 < 7lri_d01 DNA/RNA_polymerases : 1.28 < 3v4i_d02 DNA/RNA_polymerases : 1.29 < 8way_d01 beta_and_beta-prime_subunits_of_DNA_ : 1.29 < 7z9g_d00 Type_II_DNA_topoisomerase : 1.29 < 1xny_c01 PROPIONYL-COA CARBOXYLASE COMPLEX B : 1.30 < 6kqm_d02 THERMUS THERMOPHILUS INITIAL TRANSCR : 1.30 < 5i3u_d01 DNA/RNA_polymerases : 1.31 < 7z4g_d00 SPCAS9 BOUND TO 12-NUCLEOTIDE COMPLE : 1.31 < 1f0v_d00 RNase_A-like : 1.31 < 7wwv_d07 DNA BOUND-ICP1 CSY COMPLEX : 1.32 < 4fs1_d00 DNA/RNA_polymerases : 1.32 < 5w64_d02 RNA POLYMERASE I INITIAL TRANSCRIBIN : 1.33 < 4ebd_d00 DNA/RNA_polymerases : 1.33 < 3v4i_d02 DNA/RNA_polymerases : 1.33 < 6x43_d02 MFD-BOUND E.COLI RNA POLYMERASE ELON : 1.34 < 3v4i_d02 DNA/RNA_polymerases : 1.34 < 6b44_d01 CRYO-EM STRUCTURE OF TYPE I-F CRISPR : 1.34 < 1bd3_c03 URACIL PHOSPHORIBOSYLTRANSFERASE : 1.34 < 8w8f_d01 Translation_proteins_SH3-like_domain : 1.35 < 5vvr_d02 P-loop_containing_nucleoside_triphos : 1.35 < 7py6_d02 beta_and_beta-prime_subunits_of_DNA_ : 1.35 < 7py6_d01 CRYOEM STRUCTURE OF E.COLI RNA POLYM : 1.35 < 8w8e_d02 Translation_proteins_SH3-like_domain : 1.35 < 6kqm_d02 THERMUS THERMOPHILUS INITIAL TRANSCR : 1.35 < 3rzd_d00 RNA POLYMERASE II INITIATION COMPLEX : 1.36 < 6xh8_d05 cAMP-binding_domain-like : 1.36 < 3x1l_d03 CRYSTAL STRUCTURE OF THE CRISPR-CAS : 1.37 < 7u19_d00 RFC:PCNA BOUND TO NICKED DNA : 1.37 < 6dve_d01 Sigma2_domain_of_RNA_polymerase_sigm : 1.37 < 8k28_d04 ICP1 CSY-DSDNA COMPLEX (FORM 1) : 1.38 < 6kqm_d02 THERMUS THERMOPHILUS INITIAL TRANSCR : 1.38 < 1ddj_c13 PLASMINOGEN : 1.38 < 5ua2_d00 Homeodomain-like : 1.38 < 6m6c_d01 CRYOEM STRUCTURE OF THERMUS THERMOPH : 1.38 < 6m6c_d02 beta_and_beta-prime_subunits_of_DNA_ : 1.38 < 5ld2_d06 P-loop_containing_nucleoside_triphos : 1.38 < 5ld2_d00 P-loop_containing_nucleoside_triphos : 1.38 < 4aqu_d02 Homing_endonucleases : 1.39 < 1ddj_c15 PLASMINOGEN : 1.39 < 6p4f_d00 CRYSTAL STRUCTURE OF THE XPB-BAX1-FO : 1.39 < 2i3p_d05 Homing_endonucleases : 1.40 < 2i3p_d03 Homing_endonucleases : 1.40 < 1dfo_c04 SERINE HYDROXYMETHYLTRANSFERASE : 1.41 < 1dfo_c06 SERINE HYDROXYMETHYLTRANSFERASE : 1.41 < 1dfo_c07 SERINE HYDROXYMETHYLTRANSFERASE : 1.41 < 1dfo_c05 SERINE HYDROXYMETHYLTRANSFERASE : 1.41 < 3j9x_d00 A VIRUS THAT INFECTS A HYPERTHERMOPH : 1.42 < 1xny_c01 PROPIONYL-COA CARBOXYLASE COMPLEX B : 1.42 < 6kqm_d03 THERMUS THERMOPHILUS INITIAL TRANSCR : 1.42 < 7lri_d01 DNA/RNA_polymerases : 1.42 < 1pnl_c00 PENICILLIN AMIDOHYDROLASE : 1.42 < 1ct9_c07 ASPARAGINE SYNTHETASE B : 1.42 < 1u0c_d05 Homing_endonucleases : 1.42 < 8e8m_d02 MYCOBACTERIUM TUBERCULOSIS RNAP PAUS : 1.42 < 8b3d_d02 P-loop_containing_nucleoside_triphos : 1.42 < 3qym_d06 p53-like_transcription_factors : 1.43 < 3qym_d01 p53-like_transcription_factors : 1.43 < 4aqu_d05 Homing_endonucleases : 1.43 < 4aqu_d03 Homing_endonucleases : 1.43 < 4gg4_d00 Thiolase-like : 1.43 < 8dy7_d00 STREPTOMYCES VENEZUELAE RNAP TRANSCR : 1.43 < 3v4i_d01 DNA/RNA_polymerases : 1.43 < 3v4i_d00 DNA/RNA_polymerases : 1.43 < 7wwv_d07 DNA BOUND-ICP1 CSY COMPLEX : 1.43 < 7ye2_d06 Insert_subdomain_of_RNA_polymerase_a : 1.43 < 6xl5_d09 cAMP-binding_domain-like : 1.43 < 1t4c_c02 FORMYL-COENZYME A TRANSFERASE : 1.43 < 1ct9_c05 ASPARAGINE SYNTHETASE B : 1.43 < 6vvy_d10 beta_and_beta-prime_subunits_of_DNA_ : 1.43 < 6vvy_d08 MYCOBACTERIUM TUBERCULOSIS WT RNAP T : 1.43 < 8e74_d05 beta_and_beta-prime_subunits_of_DNA_ : 1.43 < 8e74_d03 MYCOBACTERIUM TUBERCULOSIS RNAP PAUS : 1.43 < 3qym_d03 p53-like_transcription_factors : 1.43 < 1ddj_c14 PLASMINOGEN : 1.43 < 3qym_d02 p53-like_transcription_factors : 1.44 < 3qym_d00 p53-like_transcription_factors : 1.44 < 1g9y_d01 Homing_endonucleases : 1.44 < 1pjh_c00 ENOYL-COA ISOMERASE; ECI1P : 1.44 < 3qym_d04 p53-like_transcription_factors : 1.44 < 5i3u_d01 DNA/RNA_polymerases : 1.44 < 1t9j_d05 Homing_endonucleases : 1.44 < 5vvs_d00 RNA POL II ELONGATION COMPLEX : 1.44 < 3qym_d05 p53-like_transcription_factors : 1.44 < 7wwv_d07 DNA BOUND-ICP1 CSY COMPLEX : 1.44 < 4yg7_d04 lambda_repressor-like_DNA-binding_do : 1.44 < 2fll_d01 DNA/RNA_polymerases : 1.45 < 1pjh_c01 ENOYL-COA ISOMERASE; ECI1P : 1.45 < 8b3d_d02 P-loop_containing_nucleoside_triphos : 1.45 < 2i3p_d02 Homing_endonucleases : 1.45 < 6kj6_d04 CRYO-EM STRUCTURE OF ESCHERICHIA COL : 1.45 < 1lxa_c00 acyl-[acyl-carrier-protein]-UDP-N-ac : 1.45 < 4uqm_d00 Uracil-DNA_glycosylase-like : 1.46 < 3exj_d02 p53-like_transcription_factors : 1.46 < 1i6h_d01 RNA POLYMERASE II ELONGATION COMPLEX : 1.46 < 1i6h_d00 beta_and_beta-prime_subunits_of_DNA_ : 1.46 < 3v4i_d02 DNA/RNA_polymerases : 1.46 < 3ksb_d02 Type_II_DNA_topoisomerase : 1.46 < 7vpz_d09 "Winged_helix"_DNA-binding_domain : 1.47 < 6uqi_d00 DNA/RNA_polymerases : 1.47 < 8k27_d07 ICP1 CSY-DSDNA COMPLEX (PARTIAL DUPL : 1.47 < 2ivk_d02 His-Me_finger_endonucleases : 1.47 < 2ivk_d01 His-Me_finger_endonucleases : 1.47 < 1ddj_c12 PLASMINOGEN : 1.47 < 1ct9_c04 ASPARAGINE SYNTHETASE B : 1.47 < 3j9x_d00 A VIRUS THAT INFECTS A HYPERTHERMOPH : 1.47 < 6z9s_d02 beta_and_beta-prime_subunits_of_DNA_ : 1.47 < 1bd3_c00 URACIL PHOSPHORIBOSYLTRANSFERASE : 1.47 < 7lri_d01 DNA/RNA_polymerases : 1.48 < 1ct9_c06 ASPARAGINE SYNTHETASE B : 1.48 < 8k28_d04 ICP1 CSY-DSDNA COMPLEX (FORM 1) : 1.48 < 3v4i_d01 DNA/RNA_polymerases : 1.48 < 3v4i_d00 DNA/RNA_polymerases : 1.48 < 1g9y_d05 Homing_endonucleases : 1.48 < 7jvt_d01 lambda_repressor-like_DNA-binding_do : 1.48 < 1pjh_c02 ENOYL-COA ISOMERASE; ECI1P : 1.48 < 7mei_d01 COMPOSITE STRUCTURE OF EC+EC organis : 1.48 < 5w66_d01 RNA POLYMERASE I INITIAL TRANSCRIBIN : 1.48 < 1d6o_c00 FK506-BINDING PROTEIN : 1.48 < 8way_d01 beta_and_beta-prime_subunits_of_DNA_ : 1.48 < 5i3u_d01 DNA/RNA_polymerases : 1.48 < 1t9i_d05 Homing_endonucleases : 1.49 < 1t9i_d03 Homing_endonucleases : 1.49 < 1bp2_c00 PHOSPHOLIPASE A2 (E.C.3.1.1.4) (PHOS : 1.49 < 3j9x_d00 A VIRUS THAT INFECTS A HYPERTHERMOPH : 1.49 < 1qrz_c21 PLASMINOGEN : 1.49 < 1t9j_d04 Homing_endonucleases : 1.49 < 1t9j_d01 Homing_endonucleases : 1.49 < 7mk9_d03 COMPLEX STRUCTURE OF TRAILING EC OF : 1.49 < 7mk9_d01 beta_and_beta-prime_subunits_of_DNA_ : 1.49 < 3oda_d06 Glucocorticoid_receptor-like_DNA-bin : 1.49 < 1u0c_d04 Homing_endonucleases : 1.49 < 1u0c_d01 Homing_endonucleases : 1.49 < 7f75_d11 Sigma2_domain_of_RNA_polymerase_sigm : 1.49 < 2v9w_d00 DNA/RNA_polymerases : 1.50 < 7z9g_d00 Type_II_DNA_topoisomerase : 1.50 < 8i87_d00 Toll/Interleukin_receptor_TIR_domain : 1.50 < 2dbt_c00 CHITINASE C : 1.50 < ************************************************* user.SUML ******************************************************** 1xny_c00 PROPIONYL-COA CARBOXYLASE COMPLEX B : 0.69 < 1xny_c00 PROPIONYL-COA CARBOXYLASE COMPLEX B : 0.71 < 7yul_d00 CRYSTAL STRUCTURE OF HUMAN BEND6 BEN : 0.74 < 5cy2_d05 Resolvase-like : 0.80 < 7zwc_d02 STRUCTURE OF SNAPC:TBP-TFIIA-TFIIB S : 0.88 < 1xny_c00 PROPIONYL-COA CARBOXYLASE COMPLEX B : 0.90 < 1mdm_d02 Homeodomain-like : 0.92 < 1xny_c01 PROPIONYL-COA CARBOXYLASE COMPLEX B : 0.93 < 4yit_d03 Homing_endonucleases : 0.95 < 5c4j_d01 beta_and_beta-prime_subunits_of_DNA_ : 0.96 < 1k78_d06 Homeodomain-like : 0.96 < 1pmi_c00 PHOSPHOMANNOSE ISOMERASE : 0.98 < 6kql_d04 Sigma2_domain_of_RNA_polymerase_sigm : 1.01 < 1pjh_c01 ENOYL-COA ISOMERASE; ECI1P : 1.02 < 1pjh_c00 ENOYL-COA ISOMERASE; ECI1P : 1.02 < 1f6d_c02 UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE : 1.03 < 5zk1_d00 Leucine_zipper_domain : 1.04 < 6mig_d00 DNA/RNA_polymerases : 1.04 < 1pjh_c02 ENOYL-COA ISOMERASE; ECI1P : 1.04 < 8dfa_d04 TYPE I-C CASCADE BOUND TO SSDNA TARG : 1.05 < 8b3d_d02 P-loop_containing_nucleoside_triphos : 1.06 < 1be1_c02 GLUTAMATE MUTASE : 1.08 < 5fhd_d01 P-loop_containing_nucleoside_triphos : 1.10 < 6x43_d02 MFD-BOUND E.COLI RNA POLYMERASE ELON : 1.10 < 6dve_d01 Sigma2_domain_of_RNA_polymerase_sigm : 1.12 < 1qai_d01 DNA/RNA_polymerases : 1.14 < 6b44_d01 CRYO-EM STRUCTURE OF TYPE I-F CRISPR : 1.20 < 6kqm_d03 THERMUS THERMOPHILUS INITIAL TRANSCR : 1.20 < 7w5p_d02 CRYSTAL STRUCTURE OF THE DIOXYGENASE : 1.20 < 7w5p_d00 CRYSTAL STRUCTURE OF THE DIOXYGENASE : 1.20 < 7w5p_d04 CRYSTAL STRUCTURE OF THE DIOXYGENASE : 1.20 < 7xg0_d07 CRYOEM STRUCTURE OF TYPE IV-A CSF-CR : 1.22 < 4gdf_d07 P-loop_containing_nucleoside_triphos : 1.22 < 4gdf_d01 P-loop_containing_nucleoside_triphos : 1.23 < 4gdf_d04 P-loop_containing_nucleoside_triphos : 1.23 < 7r06_d00 DNA/RNA_polymerases : 1.23 < 1t4c_c02 FORMYL-COENZYME A TRANSFERASE : 1.23 < 8urw_d03 CYANOBACTERIAL RNA POLYMERASE ELONGA : 1.24 < 4e68_d00 p53-like_transcription_factors : 1.24 < 4hf2_d02 "Winged_helix"_DNA-binding_domain : 1.24 < 8hyj_d00 A CRYO-EM STRUCTURE OF KTF1-BOUND PO : 1.25 < 2gb7_d01 Restriction_endonuclease-like : 1.25 < 8tvy_d02 P-loop_containing_nucleoside_triphos : 1.26 < 8tvy_d04 P-loop_containing_nucleoside_triphos : 1.26 < 1bg1_d00 p53-like_transcription_factors : 1.26 < 1lij_c01 ADENOSINE KINASE : 1.26 < 1tz3_c03 PUTATIVE SUGAR KINASE : 1.26 < 5h9f_d07 CRYSTAL STRUCTURE OF E. COLI CASCADE : 1.26 < 2c3x_p00 ALPHA-AMYLASE G-6 : 1.28 < 3v4i_d01 DNA/RNA_polymerases : 1.29 < 3v4i_d00 DNA/RNA_polymerases : 1.29 < 3ugm_d01 Thiolase-like : 1.29 < 8hbm_d01 Glucocorticoid_receptor-like_DNA-bin : 1.29 < 1tz3_c02 PUTATIVE SUGAR KINASE : 1.29 < 8g8j_d00 DNA/RNA_polymerases : 1.29 < 3j9x_d00 A VIRUS THAT INFECTS A HYPERTHERMOPH : 1.29 < 5h9e_d07 CRYSTAL STRUCTURE OF E. COLI CASCADE : 1.30 < 2odj_o00 PORIN D : 1.30 < 5w64_d02 RNA POLYMERASE I INITIAL TRANSCRIBIN : 1.30 < 1xny_c01 PROPIONYL-COA CARBOXYLASE COMPLEX B : 1.31 < 7lri_d01 DNA/RNA_polymerases : 1.31 < 5w66_d01 RNA POLYMERASE I INITIAL TRANSCRIBIN : 1.31 < 7zwc_d02 STRUCTURE OF SNAPC:TBP-TFIIA-TFIIB S : 1.31 < 1dfo_c04 SERINE HYDROXYMETHYLTRANSFERASE : 1.32 < 7ye1_d06 Insert_subdomain_of_RNA_polymerase_a : 1.32 < 1dfo_c06 SERINE HYDROXYMETHYLTRANSFERASE : 1.32 < 1dfo_c05 SERINE HYDROXYMETHYLTRANSFERASE : 1.32 < 1grc_c02 GLYCINAMIDE RIBONUCLEOTIDE TRANSFORM : 1.32 < 7py6_d02 beta_and_beta-prime_subunits_of_DNA_ : 1.32 < 7py6_d01 CRYOEM STRUCTURE OF E.COLI RNA POLYM : 1.32 < 1dfo_c07 SERINE HYDROXYMETHYLTRANSFERASE : 1.33 < 8way_d01 beta_and_beta-prime_subunits_of_DNA_ : 1.33 < 4ebd_d00 DNA/RNA_polymerases : 1.33 < 1ddj_c15 PLASMINOGEN : 1.33 < 7f75_d11 Sigma2_domain_of_RNA_polymerase_sigm : 1.33 < 3od8_d00 Glucocorticoid_receptor-like_DNA-bin : 1.33 < 3v4i_d02 DNA/RNA_polymerases : 1.34 < 7z9k_d01 Type_II_DNA_topoisomerase : 1.34 < 6kqm_d02 THERMUS THERMOPHILUS INITIAL TRANSCR : 1.34 < 8flj_d02 CAS1-CAS2/3 INTEGRASE AND IHF BOUND : 1.34 < 5hp4_d02 PIN_domain-like : 1.34 < 7p3f_d01 STREPTOMYCES COELICOLOR DATP/ATP-LOA : 1.34 < 3khh_d00 DNA/RNA_polymerases : 1.35 < 1xny_c00 PROPIONYL-COA CARBOXYLASE COMPLEX B : 1.35 < 6n1p_d02 Type_II_DNA_topoisomerase : 1.35 < 1qrz_c22 PLASMINOGEN : 1.35 < 4kb1_d00 Ribonuclease_H-like : 1.35 < 8btg_d03 P-loop_containing_nucleoside_triphos : 1.36 < 8gbf_d00 DNA/RNA_polymerases : 1.36 < 8ski_d00 DNA/RNA_polymerases : 1.36 < 3epg_d00 DNA/RNA_polymerases : 1.36 < 5k1y_d02 "Winged_helix"_DNA-binding_domain : 1.36 < 4pzi_d00 ZINC FINGER REGION OF MLL2 IN COMPLE : 1.36 < 1qrz_c21 PLASMINOGEN : 1.37 < 2bhg_c02 FOOT-AND-MOUTH DISEASE VIRUS 3C PROT : 1.38 < 1ddj_c13 PLASMINOGEN : 1.39 < 3oda_d02 Glucocorticoid_receptor-like_DNA-bin : 1.39 < 4gg4_d00 Thiolase-like : 1.39 < 7oz3_d02 TrkA_C-terminal_domain-like : 1.39 < 7xx7_d01 CRYSTAL STRUCTURE OF NUCLEOSOME-H1X : 1.40 < 1qrz_c20 PLASMINOGEN : 1.41 < 1rgq_c01 NS4A PEPTIDE : 1.41 < 7f75_d11 Sigma2_domain_of_RNA_polymerase_sigm : 1.41 < 3oda_d06 Glucocorticoid_receptor-like_DNA-bin : 1.41 < 6kqm_d02 THERMUS THERMOPHILUS INITIAL TRANSCR : 1.41 < 5vvr_d02 P-loop_containing_nucleoside_triphos : 1.41 < 1xny_c01 PROPIONYL-COA CARBOXYLASE COMPLEX B : 1.42 < 5w64_d02 RNA POLYMERASE I INITIAL TRANSCRIBIN : 1.42 < 6mig_d00 DNA/RNA_polymerases : 1.42 < 3rzd_d00 RNA POLYMERASE II INITIATION COMPLEX : 1.42 < 5n8o_d00 Origin_of_replication-binding_domain : 1.42 < 8tvy_d04 P-loop_containing_nucleoside_triphos : 1.42 < 8tvy_d02 P-loop_containing_nucleoside_triphos : 1.42 < 1zvv_d00 Periplasmic_binding_protein-like_I : 1.42 < 1ok4_c04 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS : 1.42 < 1ok4_c01 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS : 1.43 < 6m6c_d02 beta_and_beta-prime_subunits_of_DNA_ : 1.43 < 6m6c_d01 CRYOEM STRUCTURE OF THERMUS THERMOPH : 1.43 < 2amg_c02 1,4-ALPHA-D-GLUCAN MALTOTETRAHYDROLA : 1.43 < 1lxa_c00 acyl-[acyl-carrier-protein]-UDP-N-ac : 1.43 < 8syi_d02 CYANOBACTERIAL RNAP-EC : 1.43 < 1ok4_c06 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS : 1.43 < 5k1y_d02 "Winged_helix"_DNA-binding_domain : 1.43 < 1qrz_c23 PLASMINOGEN : 1.44 < 1ok4_c05 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS : 1.44 < 3oda_d04 Glucocorticoid_receptor-like_DNA-bin : 1.44 < 6mig_d00 DNA/RNA_polymerases : 1.44 < 7z9m_d00 Type_II_DNA_topoisomerase : 1.44 < 1ok4_c08 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS : 1.44 < 1ddj_c14 PLASMINOGEN : 1.44 < 5vvs_d00 RNA POL II ELONGATION COMPLEX : 1.44 < 7xg2_d02 CRYOEM STRUCTURE OF TYPE IV-A NTS-NI : 1.44 < 1ok4_c09 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS : 1.45 < 1ok4_c03 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS : 1.45 < 1ok4_c00 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS : 1.45 < 6xh8_d05 cAMP-binding_domain-like : 1.45 < 6kqm_d02 THERMUS THERMOPHILUS INITIAL TRANSCR : 1.45 < 3od8_d04 Glucocorticoid_receptor-like_DNA-bin : 1.45 < 3ebc_d03 Restriction_endonuclease-like : 1.45 < 1ok4_c02 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS : 1.45 < 1ok4_c07 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS : 1.46 < 6cnf_d03 TATA-box_binding_protein-like : 1.46 < 3j9x_d00 A VIRUS THAT INFECTS A HYPERTHERMOPH : 1.46 < 6jup_d00 DNA/RNA_polymerases : 1.46 < 6amo_d00 DNA/RNA_polymerases : 1.46 < 7m7o_d00 DNA/RNA_polymerases : 1.46 < 8b1u_d02 P-loop_containing_nucleoside_triphos : 1.47 < 2v9w_d00 DNA/RNA_polymerases : 1.47 < 1pjh_c02 ENOYL-COA ISOMERASE; ECI1P : 1.47 < 6vvy_d10 beta_and_beta-prime_subunits_of_DNA_ : 1.47 < 6vvy_d08 MYCOBACTERIUM TUBERCULOSIS WT RNAP T : 1.47 < 6x2n_d02 MFD-BOUND E.COLI RNA POLYMERASE ELON : 1.47 < 4enk_d00 Methylated_DNA-protein_cysteine_meth : 1.47 < 3ebc_d03 Restriction_endonuclease-like : 1.48 < 6xl5_d09 cAMP-binding_domain-like : 1.48 < 7ecw_d00 THE CSY-ACRIF14-DSDNA COMPLEX organ : 1.48 < 4q10_d01 PIN_domain-like : 1.48 < 6z9s_d02 beta_and_beta-prime_subunits_of_DNA_ : 1.48 < 4j9n_d00 DNA/RNA_polymerases : 1.48 < 7fvt_d04 Type_II_DNA_topoisomerase : 1.48 < 4wqs_d00 THERMUS THERMOPHILUS RNA POLYMERASE : 1.48 < 8ozd_d02 Toll/Interleukin_receptor_TIR_domain : 1.48 < 1pjh_c01 ENOYL-COA ISOMERASE; ECI1P : 1.48 < 7ecw_d00 THE CSY-ACRIF14-DSDNA COMPLEX organ : 1.49 < 8t79_d00 SPRY-CAS9:GRNA COMPLEX BOUND TO NON- : 1.49 < 8ozd_d01 Ribonuclease_H-like : 1.49 < 8ozd_d00 Toll/Interleukin_receptor_TIR_domain : 1.49 <