*********** PTASSAMj00 ******** FILEIN user.vek ../../CSA/PIK_SPRITE/ TRANSFORM 0.8910 0.1765 0.4184 -0.0984 0.9745 -0.2016 -0.4433 0.1384 0.8856 -11.116 13.351 -132.160 Match found in 7ce1_d08 Periplasmic_binding_protein-like_I Pattern 7ce1_d08 Query structure RMSD= 1.25 A No. of residues = 4 ------- ------- --------------- S 72 LEU matches A 13 LEU S 73 ARG matches A 41 ARG T 72 LEU matches A 10 LEU T 73 ARG matches A 6 ARG TRANSFORM -0.8815 -0.0589 -0.4685 0.2519 0.7805 -0.5721 0.3994 -0.6223 -0.6732 10.141 11.536 -133.609 Match found in 7ce1_d08 Periplasmic_binding_protein-like_I Pattern 7ce1_d08 Query structure RMSD= 1.36 A No. of residues = 4 ------- ------- --------------- S 72 LEU matches A 10 LEU S 73 ARG matches A 6 ARG T 72 LEU matches A 13 LEU T 73 ARG matches A 41 ARG TRANSFORM 0.8339 0.5450 -0.0868 0.1755 -0.1127 0.9780 0.5232 -0.8308 -0.1897 11.243 -11.159 -28.912 Match found in 7ce1_d06 Periplasmic_binding_protein-like_I Pattern 7ce1_d06 Query structure RMSD= 1.36 A No. of residues = 4 ------- ------- --------------- O 72 LEU matches A 13 LEU O 73 ARG matches A 41 ARG P 72 LEU matches A 10 LEU P 73 ARG matches A 6 ARG TRANSFORM -0.4790 0.8767 0.0435 -0.3348 -0.1367 -0.9323 -0.8114 -0.4611 0.3590 -8.762 1.828 -55.954 Match found in 7ce1_d02 Periplasmic_binding_protein-like_I Pattern 7ce1_d02 Query structure RMSD= 1.38 A No. of residues = 4 ------- ------- --------------- C 72 LEU matches A 13 LEU C 73 ARG matches A 41 ARG D 72 LEU matches A 10 LEU D 73 ARG matches A 6 ARG TRANSFORM 0.5809 0.4932 -0.6475 0.3657 0.5526 0.7490 0.7272 -0.6719 0.1406 -16.104 -12.369 -70.041 Match found in 7ce1_d02 Periplasmic_binding_protein-like_I Pattern 7ce1_d02 Query structure RMSD= 1.46 A No. of residues = 4 ------- ------- --------------- C 72 LEU matches A 10 LEU C 73 ARG matches A 6 ARG D 72 LEU matches A 13 LEU D 73 ARG matches A 41 ARG TRANSFORM 0.3342 0.7197 -0.6085 0.9404 -0.2117 0.2660 0.0627 -0.6612 -0.7476 196.341 -17.482 15.866 Match found in 7snz_m01 Crystal Structure of HIV-1 Reverse T Pattern 7snz_m01 Query structure RMSD= 0.78 A No. of residues = 3 ------- ------- --------------- A 380 ILE matches A 23 ILE B 401 TRP matches A 60 TRP B 404 GLU matches A 64 GLU TRANSFORM -0.5148 -0.4621 0.7221 -0.6115 0.7883 0.0685 -0.6009 -0.4063 -0.6884 6.087 115.383 1.570 Match found in 2pe5_d01 Periplasmic_binding_protein-like_I Pattern 2pe5_d01 Query structure RMSD= 0.85 A No. of residues = 3 ------- ------- --------------- A 53 ALA matches A 59 ALA A 56 LEU matches A 63 LEU A 57 ALA matches A 61 ALA TRANSFORM 0.0620 -0.0929 0.9937 0.9240 0.3818 -0.0220 -0.3774 0.9195 0.1095 21.373 18.159 10.962 Match found in 2d32_m01 Crystal Structure of Michaelis Compl Pattern 2d32_m01 Query structure RMSD= 0.92 A No. of residues = 3 ------- ------- --------------- A 27 GLU matches A 74 GLU A 67 GLU matches A 22 GLU A 69 ILE matches A 23 ILE TRANSFORM -0.2951 0.3045 -0.9057 -0.9051 0.2146 0.3671 0.3061 0.9280 0.2122 21.634 10.991 13.571 Match found in 8bzw_m00 Co-soaked stabilizers for ERa - 14-3 Pattern 8bzw_m00 Query structure RMSD= 0.93 A No. of residues = 3 ------- ------- --------------- A 85 ARG matches A 19 ARG A 86 GLU matches A 74 GLU A 89 GLU matches A 22 GLU TRANSFORM -0.9943 -0.0594 -0.0886 -0.0453 -0.5169 0.8548 -0.0966 0.8540 0.5113 233.353 189.657 181.573 Match found in 8ff4_d01 P-loop_containing_nucleoside_triphos Pattern 8ff4_d01 Query structure RMSD= 0.96 A No. of residues = 3 ------- ------- --------------- J 46 GLU matches A 34 GLU J 47 ARG matches A 31 ARG J 50 ALA matches A 35 ALA TRANSFORM -0.9943 -0.0594 -0.0886 -0.0453 -0.5169 0.8548 -0.0966 0.8540 0.5113 233.353 189.657 181.573 Match found in 8fcu_d01 CRYO-EM STRUCTURE OF CASCADE-DNA-TNI Pattern 8fcu_d01 Query structure RMSD= 0.96 A No. of residues = 3 ------- ------- --------------- J 46 GLU matches A 34 GLU J 47 ARG matches A 31 ARG J 50 ALA matches A 35 ALA TRANSFORM -0.0381 -0.8366 0.5464 -0.2693 -0.5180 -0.8119 0.9623 -0.1781 -0.2055 156.654 174.304 161.660 Match found in 7c99_d01 P-loop_containing_nucleoside_triphos Pattern 7c99_d01 Query structure RMSD= 0.97 A No. of residues = 3 ------- ------- --------------- B 236 ARG matches A 6 ARG B 239 LEU matches A 44 LEU B 240 ALA matches A 52 ALA TRANSFORM -0.1837 0.1476 -0.9718 0.2112 0.9715 0.1076 0.9600 -0.1854 -0.2096 218.709 217.706 209.970 Match found in 7x74_d08 "Winged_helix"_DNA-binding_domain Pattern 7x74_d08 Query structure RMSD= 0.97 A No. of residues = 3 ------- ------- --------------- F 410 LEU matches A 44 LEU F 412 GLU matches A 45 GLU F 421 LEU matches A 10 LEU TRANSFORM 0.4683 0.2895 -0.8348 0.8326 0.1718 0.5266 0.2958 -0.9416 -0.1606 -19.449 100.101 -4.746 Match found in 1efa_d04 Periplasmic_binding_protein-like_I Pattern 1efa_d04 Query structure RMSD= 0.97 A No. of residues = 3 ------- ------- --------------- B 53 ALA matches A 59 ALA B 56 LEU matches A 63 LEU B 57 ALA matches A 61 ALA TRANSFORM -0.1053 0.8364 -0.5379 -0.3128 0.4856 0.8163 0.9440 0.2542 0.2105 7.266 -2.938 -4.737 Match found in 3ld0_m01 Crystal structure of B.licheniformis Pattern 3ld0_m01 Query structure RMSD= 1.07 A No. of residues = 3 ------- ------- --------------- H 51 ILE matches A 37 ILE I 151 ILE matches A 16 ILE a 251 ILE matches A 33 ILE TRANSFORM 0.4954 0.7138 -0.4951 -0.2580 0.6651 0.7008 0.8295 -0.2194 0.5136 0.607 62.280 -8.243 Match found in 2v9w_d00 DNA/RNA_polymerases Pattern 2v9w_d00 Query structure RMSD= 1.08 A No. of residues = 3 ------- ------- --------------- A 32 VAL matches A 57 VAL A 42 ALA matches A 61 ALA A 44 ALA matches A 59 ALA TRANSFORM -0.3091 -0.7296 -0.6100 0.3358 0.5164 -0.7878 0.8898 -0.4483 0.0854 5.003 -20.598 -6.776 Match found in 3ld0_m01 Crystal structure of B.licheniformis Pattern 3ld0_m01 Query structure RMSD= 1.09 A No. of residues = 3 ------- ------- --------------- H 51 ILE matches A 16 ILE I 151 ILE matches A 33 ILE a 251 ILE matches A 37 ILE TRANSFORM -0.6867 0.6329 0.3577 0.7083 0.6933 0.1330 -0.1638 0.3446 -0.9243 202.050 153.383 225.647 Match found in 8ph9_d02 E. COLI RNA POLYMERASE PAUSED AT OPS Pattern 8ph9_d02 Query structure RMSD= 1.09 A No. of residues = 3 ------- ------- --------------- I 367 TYR matches A 36 TYR I 380 ALA matches A 35 ALA I 383 SER matches A 38 SER TRANSFORM -0.7169 0.0589 0.6947 -0.1654 -0.9823 -0.0874 0.6773 -0.1776 0.7140 20.144 -14.310 0.414 Match found in 3ld0_m01 Crystal structure of B.licheniformis Pattern 3ld0_m01 Query structure RMSD= 1.12 A No. of residues = 3 ------- ------- --------------- H 51 ILE matches A 33 ILE I 151 ILE matches A 37 ILE a 251 ILE matches A 16 ILE TRANSFORM 0.6107 -0.5620 0.5578 -0.1262 -0.7645 -0.6321 0.7817 0.3157 -0.5379 114.667 18.764 -33.589 Match found in 6jup_d00 DNA/RNA_polymerases Pattern 6jup_d00 Query structure RMSD= 1.12 A No. of residues = 3 ------- ------- --------------- A 246 GLU matches A 17 GLU A 285 ARG matches A 7 ARG A 299 THR matches A 9 THR TRANSFORM -0.7198 0.4278 0.5468 -0.6099 -0.7659 -0.2037 0.3316 -0.4800 0.8121 56.779 58.624 49.237 Match found in 4jjj_m01 The structure of T. fusca GH48 D224N Pattern 4jjj_m01 Query structure RMSD= 1.13 A No. of residues = 3 ------- ------- --------------- A 550 ASP matches A 26 ASP A 603 HIS matches A 73 HIS A 604 LEU matches A 72 LEU TRANSFORM -0.5639 0.8213 -0.0865 -0.7557 -0.4709 0.4552 0.3332 0.3220 0.8862 18.651 -0.813 31.364 Match found in 3dv0_m00 Snapshots of catalysis in the E1 sub Pattern 3dv0_m00 Query structure RMSD= 1.14 A No. of residues = 3 ------- ------- --------------- A 183 GLU matches A 34 GLU B 60 SER matches A 38 SER B 88 GLU matches A 17 GLU TRANSFORM 0.0657 0.9717 -0.2271 0.0411 0.2247 0.9735 0.9970 -0.0733 -0.0252 -6.313 12.603 15.174 Match found in 1g7a_m00 1.2 A structure of T3R3 human insuli Pattern 1g7a_m00 Query structure RMSD= 1.15 A No. of residues = 3 ------- ------- --------------- D 6 LEU matches A 63 LEU H 6 LEU matches A 72 LEU L 6 LEU matches A 67 LEU TRANSFORM 0.0030 -0.2912 0.9566 -0.0778 -0.9538 -0.2901 0.9970 -0.0736 -0.0255 14.069 -0.834 15.171 Match found in 1g7a_m00 1.2 A structure of T3R3 human insuli Pattern 1g7a_m00 Query structure RMSD= 1.15 A No. of residues = 3 ------- ------- --------------- D 6 LEU matches A 72 LEU H 6 LEU matches A 67 LEU L 6 LEU matches A 63 LEU TRANSFORM -0.0688 -0.6805 -0.7295 0.0362 0.7291 -0.6835 0.9970 -0.0734 -0.0255 -7.756 -11.769 15.170 Match found in 1g7a_m00 1.2 A structure of T3R3 human insuli Pattern 1g7a_m00 Query structure RMSD= 1.16 A No. of residues = 3 ------- ------- --------------- D 6 LEU matches A 67 LEU H 6 LEU matches A 63 LEU L 6 LEU matches A 72 LEU TRANSFORM -0.1700 0.1858 0.9678 -0.9649 0.1680 -0.2018 -0.2000 -0.9681 0.1508 38.043 9.033 -30.022 Match found in 3oqn_d01 Periplasmic_binding_protein-like_I Pattern 3oqn_d01 Query structure RMSD= 1.16 A No. of residues = 3 ------- ------- --------------- A 53 ALA matches A 59 ALA A 56 LEU matches A 63 LEU A 57 ALA matches A 61 ALA TRANSFORM -0.9660 -0.0060 -0.2585 -0.1716 -0.7331 0.6581 -0.1935 0.6801 0.7071 210.723 204.031 247.622 Match found in 8fcj_d07 CRYO-EM STRUCTURE OF CASCADE-DNA (P2 Pattern 8fcj_d07 Query structure RMSD= 1.16 A No. of residues = 3 ------- ------- --------------- G 109 LEU matches A 1 LEU H 34 ARG matches A 6 ARG H 39 THR matches A 9 THR TRANSFORM 0.8618 0.2233 -0.4554 -0.4384 -0.1236 -0.8902 -0.2551 0.9669 -0.0086 -25.718 104.743 1.573 Match found in 2pe5_d01 Periplasmic_binding_protein-like_I Pattern 2pe5_d01 Query structure RMSD= 1.16 A No. of residues = 3 ------- ------- --------------- A 53 ALA matches A 61 ALA A 56 LEU matches A 63 LEU A 57 ALA matches A 59 ALA TRANSFORM -0.5978 -0.7364 0.3169 0.7098 -0.3024 0.6362 -0.3726 0.6052 0.7034 24.457 43.792 15.162 Match found in 2v9w_d00 DNA/RNA_polymerases Pattern 2v9w_d00 Query structure RMSD= 1.17 A No. of residues = 3 ------- ------- --------------- A 32 VAL matches A 57 VAL A 42 ALA matches A 59 ALA A 44 ALA matches A 61 ALA TRANSFORM 0.2871 0.9462 0.1492 -0.6954 0.0987 0.7119 0.6588 -0.3081 0.6863 15.569 20.312 24.710 Match found in 7q5x_m00 HIF PROLYL HYDROXYLASE 2 (PHD2/EGLN1 Pattern 7q5x_m00 Query structure RMSD= 1.18 A No. of residues = 3 ------- ------- --------------- A 229 LEU matches A 72 LEU A 234 LYS matches A 71 LYS A 263 GLU matches A 27 GLU TRANSFORM 0.4206 -0.3722 0.8274 -0.8123 0.2518 0.5261 -0.4041 -0.8934 -0.1964 -5.622 0.088 7.582 Match found in 8h0j_m00 Annexin A5 mutant Pattern 8h0j_m00 Query structure RMSD= 1.18 A No. of residues = 3 ------- ------- --------------- A 121 GLU matches A 64 GLU A 124 ALA matches A 61 ALA A 125 ILE matches A 65 ILE TRANSFORM 0.4465 0.3560 0.8209 -0.5665 -0.5978 0.5673 0.6926 -0.7183 -0.0653 -157.455 11.938 -3.379 Match found in 4ylo_d23 E. COLI TRANSCRIPTION INITIATION COM Pattern 4ylo_d23 Query structure RMSD= 1.20 A No. of residues = 3 ------- ------- --------------- O 445 ILE matches A 23 ILE O 541 GLU matches A 14 GLU O 546 GLU matches A 22 GLU TRANSFORM -0.3119 -0.9109 0.2703 -0.9389 0.2517 -0.2349 0.1460 -0.3271 -0.9337 15.279 9.994 43.596 Match found in 3oqo_d04 Periplasmic_binding_protein-like_I Pattern 3oqo_d04 Query structure RMSD= 1.20 A No. of residues = 3 ------- ------- --------------- C 53 ALA matches A 59 ALA C 56 LEU matches A 63 LEU C 57 ALA matches A 61 ALA TRANSFORM 0.9831 -0.1831 0.0087 0.0888 0.4346 -0.8962 0.1603 0.8818 0.4435 -34.616 -29.654 -41.384 Match found in 5bs3_d01 Type_II_DNA_topoisomerase Pattern 5bs3_d01 Query structure RMSD= 1.20 A No. of residues = 3 ------- ------- --------------- B1085 SER matches A 0 SER B1088 GLU matches A 2 GLU B1092 ARG matches A 6 ARG TRANSFORM -0.2594 -0.9228 0.2849 -0.9558 0.2029 -0.2129 0.1387 -0.3275 -0.9346 -21.976 63.443 44.538 Match found in 3oqm_d04 Periplasmic_binding_protein-like_I Pattern 3oqm_d04 Query structure RMSD= 1.20 A No. of residues = 3 ------- ------- --------------- C 53 ALA matches A 59 ALA C 56 LEU matches A 63 LEU C 57 ALA matches A 61 ALA TRANSFORM -0.3902 0.9011 0.1890 -0.7340 -0.4284 0.5269 0.5558 0.0669 0.8286 9.132 26.603 27.844 Match found in 8g9c_m00 Diphosphoinositol polyphosphate phos Pattern 8g9c_m00 Query structure RMSD= 1.21 A No. of residues = 3 ------- ------- --------------- A 65 ARG matches A 19 ARG A 66 GLU matches A 74 GLU A 69 GLU matches A 22 GLU TRANSFORM 0.3454 -0.9357 -0.0719 -0.3793 -0.2093 0.9013 -0.8584 -0.2841 -0.4272 0.592 -3.451 10.012 Match found in 3ld0_m01 Crystal structure of B.licheniformis Pattern 3ld0_m01 Query structure RMSD= 1.22 A No. of residues = 3 ------- ------- --------------- H 51 ILE matches A 16 ILE I 151 ILE matches A 37 ILE a 251 ILE matches A 33 ILE TRANSFORM -0.7066 -0.0605 0.7051 -0.1716 0.9812 -0.0879 -0.6865 -0.1831 -0.7037 -21.043 -12.115 -10.128 Match found in 5yuv_d01 DNA/RNA_polymerases Pattern 5yuv_d01 Query structure RMSD= 1.23 A No. of residues = 3 ------- ------- --------------- A 242 SER matches A 40 SER A 246 GLU matches A 8 GLU A 285 ARG matches A 51 ARG TRANSFORM 0.2489 0.5510 0.7965 0.4601 0.6564 -0.5978 -0.8523 0.5153 -0.0901 38.995 -42.821 52.297 Match found in 5xd5_m00 Crystal structure of Mycobacterium s Pattern 5xd5_m00 Query structure RMSD= 1.23 A No. of residues = 3 ------- ------- --------------- A 80 ARG matches A 19 ARG A 81 GLU matches A 74 GLU A 84 GLU matches A 22 GLU TRANSFORM 0.7239 0.5605 -0.4022 0.2254 -0.7432 -0.6300 -0.6520 0.3654 -0.6644 -1.913 -21.618 7.840 Match found in 3ld0_m01 Crystal structure of B.licheniformis Pattern 3ld0_m01 Query structure RMSD= 1.23 A No. of residues = 3 ------- ------- --------------- H 51 ILE matches A 37 ILE I 151 ILE matches A 33 ILE a 251 ILE matches A 16 ILE TRANSFORM -0.5636 0.4861 0.6679 0.1624 -0.7276 0.6665 0.8099 0.4841 0.3312 191.116 184.973 208.258 Match found in 8urw_d04 CYANOBACTERIAL RNA POLYMERASE ELONGA Pattern 8urw_d04 Query structure RMSD= 1.23 A No. of residues = 3 ------- ------- --------------- G 29 ALA matches A 35 ALA G 30 SER matches A 38 SER G 105 ILE matches A 33 ILE TRANSFORM -0.3524 0.9338 -0.0616 0.3831 0.2040 0.9009 0.8538 0.2939 -0.4296 66.169 42.249 78.204 Match found in 5ue3_m00 proMMP-9desFnII Pattern 5ue3_m00 Query structure RMSD= 1.24 A No. of residues = 3 ------- ------- --------------- C 129 SER matches A 38 SER C 130 GLU matches A 34 GLU C 206 ASP matches A 39 ASP TRANSFORM -0.5557 -0.1374 -0.8199 -0.2092 0.9776 -0.0220 0.8046 0.1593 -0.5720 -9.545 -17.051 -74.204 Match found in 5yut_d01 DNA/RNA_polymerases Pattern 5yut_d01 Query structure RMSD= 1.24 A No. of residues = 3 ------- ------- --------------- F 242 SER matches A 40 SER F 246 GLU matches A 8 GLU F 285 ARG matches A 51 ARG TRANSFORM -0.1114 0.2252 -0.9679 0.2937 0.9379 0.1844 0.9494 -0.2638 -0.1707 22.902 -18.882 16.115 Match found in 3dv0_m00 Snapshots of catalysis in the E1 sub Pattern 3dv0_m00 Query structure RMSD= 1.24 A No. of residues = 3 ------- ------- --------------- A 183 GLU matches A 3 GLU B 60 SER matches A 0 SER B 88 GLU matches A 4 GLU TRANSFORM -0.2540 -0.0944 -0.9626 0.8447 0.4632 -0.2683 0.4712 -0.8812 -0.0380 6.460 -15.633 8.262 Match found in 3ld0_m00 Crystal structure of B.licheniformis Pattern 3ld0_m00 Query structure RMSD= 1.25 A No. of residues = 3 ------- ------- --------------- Y 51 ILE matches A 37 ILE Y 53 GLU matches A 17 GLU Z 151 ILE matches A 16 ILE TRANSFORM -0.1264 0.9809 -0.1478 0.9742 0.1508 0.1678 0.1868 -0.1227 -0.9747 173.788 106.336 117.170 Match found in 8x6f_d04 CRYO-EM STRUCTURE OF STAPHYLOCOCCUS Pattern 8x6f_d04 Query structure RMSD= 1.25 A No. of residues = 3 ------- ------- --------------- E 197 ARG matches A 19 ARG E 211 HIS matches A 73 HIS E 214 GLU matches A 24 GLU TRANSFORM -0.5507 -0.7624 0.3399 0.8308 -0.5399 0.1351 0.0805 0.3568 0.9307 12.043 -26.129 -25.239 Match found in 5wfe_d00 CAS1-CAS2-IHF-DNA HOLO-COMPLEX organ Pattern 5wfe_d00 Query structure RMSD= 1.25 A No. of residues = 3 ------- ------- --------------- A 138 ARG matches A 51 ARG A 143 SER matches A 38 SER A 146 ARG matches A 41 ARG TRANSFORM -0.3325 0.7442 0.5793 0.3030 -0.4973 0.8129 0.8931 0.4459 -0.0601 1.891 -7.990 20.557 Match found in 1g7a_m00 1.2 A structure of T3R3 human insuli Pattern 1g7a_m00 Query structure RMSD= 1.25 A No. of residues = 3 ------- ------- --------------- D 6 LEU matches A 44 LEU H 6 LEU matches A 13 LEU L 6 LEU matches A 10 LEU TRANSFORM 0.4288 -0.8028 0.4143 0.1364 -0.3958 -0.9081 0.8930 0.4459 -0.0602 -7.865 2.355 20.558 Match found in 1g7a_m00 1.2 A structure of T3R3 human insuli Pattern 1g7a_m00 Query structure RMSD= 1.25 A No. of residues = 3 ------- ------- --------------- D 6 LEU matches A 13 LEU H 6 LEU matches A 10 LEU L 6 LEU matches A 44 LEU TRANSFORM -0.0963 0.0587 -0.9936 -0.4397 0.8931 0.0953 0.8930 0.4461 -0.0602 5.974 5.632 20.559 Match found in 1g7a_m00 1.2 A structure of T3R3 human insuli Pattern 1g7a_m00 Query structure RMSD= 1.25 A No. of residues = 3 ------- ------- --------------- D 6 LEU matches A 10 LEU H 6 LEU matches A 44 LEU L 6 LEU matches A 13 LEU TRANSFORM 0.4235 0.4314 0.7966 0.8641 0.0717 -0.4982 -0.2720 0.8993 -0.3424 30.341 14.902 86.148 Match found in 1s6m_d01 Origin_of_replication-binding_domain Pattern 1s6m_d01 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- A 72 SER matches A 40 SER A 73 ALA matches A 52 ALA A 75 ARG matches A 51 ARG TRANSFORM -0.5439 -0.1430 -0.8268 -0.2221 0.9748 -0.0225 0.8092 0.1714 -0.5620 -10.222 -15.903 -74.348 Match found in 5yux_d01 DNA/RNA_polymerases Pattern 5yux_d01 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- F 242 SER matches A 40 SER F 246 GLU matches A 8 GLU F 285 ARG matches A 51 ARG TRANSFORM 0.0439 0.2062 0.9775 0.2957 0.9319 -0.2099 -0.9543 0.2983 -0.0201 13.798 -15.303 15.261 Match found in 3ld0_m01 Crystal structure of B.licheniformis Pattern 3ld0_m01 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- H 51 ILE matches A 33 ILE I 151 ILE matches A 16 ILE a 251 ILE matches A 37 ILE TRANSFORM -0.4362 -0.6436 0.6289 -0.8998 0.3100 -0.3069 0.0026 -0.6998 -0.7144 116.588 144.444 101.668 Match found in 8k21_d01 CAS1-CAS2-DSDNA SUBREGION IN ICP1 CS Pattern 8k21_d01 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- E 18 ARG matches A 19 ARG E 33 GLU matches A 64 GLU E 52 GLU matches A 22 GLU TRANSFORM -0.9709 0.2244 -0.0842 0.1881 0.4955 -0.8480 -0.1486 -0.8391 -0.5233 58.626 46.780 -10.124 Match found in 1rzr_d06 Periplasmic_binding_protein-like_I Pattern 1rzr_d06 Query structure RMSD= 1.26 A No. of residues = 3 ------- ------- --------------- D 52 ALA matches A 59 ALA D 55 LEU matches A 63 LEU D 56 ALA matches A 61 ALA TRANSFORM 0.6048 -0.5556 0.5705 -0.0674 -0.7496 -0.6585 0.7935 0.3598 -0.4908 24.785 15.542 21.490 Match found in 4q44_d01 DNA/RNA_polymerases Pattern 4q44_d01 Query structure RMSD= 1.27 A No. of residues = 3 ------- ------- --------------- A 246 GLU matches A 17 GLU A 285 ARG matches A 7 ARG A 299 THR matches A 9 THR TRANSFORM 0.7128 0.0621 -0.6987 -0.1826 0.9782 -0.0994 0.6772 0.1984 0.7085 -22.294 -6.244 10.469 Match found in 4r8u_d00 DNA/RNA_polymerases Pattern 4r8u_d00 Query structure RMSD= 1.27 A No. of residues = 3 ------- ------- --------------- B 243 SER matches A 40 SER B 247 GLU matches A 8 GLU B 286 ARG matches A 51 ARG TRANSFORM -0.7052 -0.0798 0.7045 -0.1965 0.9767 -0.0861 -0.6812 -0.1992 -0.7044 -21.082 -12.128 -10.371 Match found in 5yv0_d01 DNA/RNA_polymerases Pattern 5yv0_d01 Query structure RMSD= 1.27 A No. of residues = 3 ------- ------- --------------- A 242 SER matches A 40 SER A 246 GLU matches A 8 GLU A 285 ARG matches A 51 ARG TRANSFORM 0.9647 -0.1530 -0.2145 -0.1232 -0.9816 0.1460 -0.2329 -0.1144 -0.9657 39.290 -14.611 279.750 Match found in 7khs_m00 OgOGA IN COMPLEX WITH LIGAND 55 Pattern 7khs_m00 Query structure RMSD= 1.28 A No. of residues = 3 ------- ------- --------------- B 388 GLU matches A 14 GLU B 391 GLU matches A 17 GLU B 392 GLU matches A 18 GLU TRANSFORM -0.7026 0.6714 -0.2357 0.1802 0.4883 0.8539 0.6884 0.5574 -0.4640 90.003 105.550 52.142 Match found in 6b44_d01 CRYO-EM STRUCTURE OF TYPE I-F CRISPR Pattern 6b44_d01 Query structure RMSD= 1.28 A No. of residues = 3 ------- ------- --------------- B 85 ARG matches A 41 ARG H 231 LEU matches A 13 LEU H 233 LEU matches A 10 LEU TRANSFORM -0.8360 -0.0282 0.5479 0.2730 -0.8876 0.3709 0.4759 0.4597 0.7498 12.873 107.832 -0.187 Match found in 1efa_d04 Periplasmic_binding_protein-like_I Pattern 1efa_d04 Query structure RMSD= 1.28 A No. of residues = 3 ------- ------- --------------- B 53 ALA matches A 61 ALA B 56 LEU matches A 63 LEU B 57 ALA matches A 59 ALA TRANSFORM -0.3240 -0.9214 -0.2146 0.6185 -0.0347 -0.7850 0.7159 -0.3871 0.5811 20.580 -2.545 8.054 Match found in 3dv0_m00 Snapshots of catalysis in the E1 sub Pattern 3dv0_m00 Query structure RMSD= 1.28 A No. of residues = 3 ------- ------- --------------- A 183 GLU matches A 3 GLU B 60 SER matches A 0 SER B 88 GLU matches A 2 GLU TRANSFORM -0.6788 0.6066 -0.4140 0.6932 0.3433 -0.6337 -0.2423 -0.7171 -0.6535 185.877 163.188 156.156 Match found in 8d3q_d00 TYPE I-C CAS4-CAS1-CAS2 COMPLEX BOUN Pattern 8d3q_d00 Query structure RMSD= 1.30 A No. of residues = 3 ------- ------- --------------- E 11 THR matches A 9 THR E 20 LEU matches A 44 LEU E 21 ARG matches A 41 ARG TRANSFORM 0.6231 0.3117 -0.7173 -0.7821 0.2501 -0.5707 0.0015 0.9167 0.3997 246.624 170.040 167.806 Match found in 9no7_m43 Cryo-EM structure of the wild-type T Pattern 9no7_m43 Query structure RMSD= 1.30 A No. of residues = 3 ------- ------- --------------- R 100 LEU matches A 49 LEU R 101 ALA matches A 52 ALA y 45 VAL matches A 50 VAL TRANSFORM -0.0048 -0.2100 -0.9777 0.9754 -0.2166 0.0417 -0.2205 -0.9534 0.2059 103.505 98.561 122.231 Match found in 6kj6_d04 CRYO-EM STRUCTURE OF ESCHERICHIA COL Pattern 6kj6_d04 Query structure RMSD= 1.30 A No. of residues = 3 ------- ------- --------------- C 508 SER matches A 40 SER F 226 LEU matches A 63 LEU F 237 ILE matches A 23 ILE TRANSFORM -0.2658 -0.8029 0.5335 -0.5765 -0.3112 -0.7555 0.7727 -0.5084 -0.3801 44.180 28.146 27.888 Match found in 3kb8_m00 2.09 Angstrom resolution structure o Pattern 3kb8_m00 Query structure RMSD= 1.31 A No. of residues = 3 ------- ------- --------------- A 104 SER matches A 40 SER A 106 LEU matches A 13 LEU A 107 THR matches A 9 THR TRANSFORM 0.6207 -0.7568 -0.2050 0.5730 0.6163 -0.5402 0.5351 0.2179 0.8162 42.805 -100.146 57.307 Match found in 8cvl_m06 Crystal structure of the Thermus the Pattern 8cvl_m06 Query structure RMSD= 1.31 A No. of residues = 3 ------- ------- --------------- D 27 LEU matches A 72 LEU D 179 GLU matches A 64 GLU O 6 LEU matches A 67 LEU TRANSFORM 0.0063 -0.2035 -0.9791 -0.9536 -0.2959 0.0553 -0.3010 0.9333 -0.1959 44.549 18.651 33.141 Match found in 5d5g_m00 Structure of colocasia esculenta agg Pattern 5d5g_m00 Query structure RMSD= 1.32 A No. of residues = 3 ------- ------- --------------- A 6 LEU matches A 44 LEU A 55 LEU matches A 13 LEU A 85 ALA matches A 52 ALA TRANSFORM 0.2033 0.7489 0.6307 0.7764 0.2692 -0.5699 -0.5966 0.6055 -0.5267 243.434 167.817 242.631 Match found in 8b3d_d02 P-loop_containing_nucleoside_triphos Pattern 8b3d_d02 Query structure RMSD= 1.33 A No. of residues = 3 ------- ------- --------------- b 795 ILE matches A 65 ILE b 796 PHE matches A 29 PHE b 800 ILE matches A 33 ILE TRANSFORM 0.6145 -0.5232 -0.5905 -0.2362 0.5922 -0.7704 0.7527 0.6129 0.2404 12.649 -7.357 -44.624 Match found in 3oqn_d01 Periplasmic_binding_protein-like_I Pattern 3oqn_d01 Query structure RMSD= 1.33 A No. of residues = 3 ------- ------- --------------- A 53 ALA matches A 61 ALA A 56 LEU matches A 63 LEU A 57 ALA matches A 59 ALA TRANSFORM -0.6646 0.6677 -0.3353 0.6822 0.3593 -0.6368 -0.3047 -0.6520 -0.6943 185.534 163.206 157.394 Match found in 8d3l_d01 TYPE I-C CAS4-CAS1-CAS2 COMPLEX BOUN Pattern 8d3l_d01 Query structure RMSD= 1.33 A No. of residues = 3 ------- ------- --------------- E 11 THR matches A 9 THR E 20 LEU matches A 44 LEU E 21 ARG matches A 41 ARG TRANSFORM -0.6683 0.6633 -0.3368 0.6954 0.3961 -0.5997 -0.2643 -0.6350 -0.7259 185.995 163.024 157.310 Match found in 8d3m_d00 TYPE I-C CAS4-CAS1-CAS2 COMPLEX BOUN Pattern 8d3m_d00 Query structure RMSD= 1.33 A No. of residues = 3 ------- ------- --------------- E 11 THR matches A 9 THR E 20 LEU matches A 44 LEU E 21 ARG matches A 41 ARG TRANSFORM 0.8130 0.5760 0.0856 -0.3142 0.5577 -0.7683 -0.4902 0.5977 0.6343 -4.343 -4.430 66.680 Match found in 3oqo_d04 Periplasmic_binding_protein-like_I Pattern 3oqo_d04 Query structure RMSD= 1.33 A No. of residues = 3 ------- ------- --------------- C 53 ALA matches A 61 ALA C 56 LEU matches A 63 LEU C 57 ALA matches A 59 ALA TRANSFORM -0.0040 0.9872 -0.1596 0.3329 0.1518 0.9307 0.9430 -0.0494 -0.3292 210.952 211.570 210.637 Match found in 7x74_d08 "Winged_helix"_DNA-binding_domain Pattern 7x74_d08 Query structure RMSD= 1.34 A No. of residues = 3 ------- ------- --------------- F 410 LEU matches A 13 LEU F 412 GLU matches A 17 GLU F 421 LEU matches A 10 LEU TRANSFORM 0.1533 0.0592 -0.9864 0.9863 0.0528 0.1565 0.0614 -0.9968 -0.0503 17.121 -25.022 35.634 Match found in 1cns_c01 CHITINASE Pattern 1cns_c01 Query structure RMSD= 1.34 A No. of residues = 3 ------- ------- --------------- B 67 GLU matches A 45 GLU B 89 GLU matches A 17 GLU B 120 SER matches A 40 SER TRANSFORM 0.0182 0.8118 -0.5836 0.4631 0.5105 0.7245 0.8861 -0.2834 -0.3666 170.028 160.560 163.121 Match found in 7c99_d01 P-loop_containing_nucleoside_triphos Pattern 7c99_d01 Query structure RMSD= 1.35 A No. of residues = 3 ------- ------- --------------- B 236 ARG matches A 41 ARG B 239 LEU matches A 44 LEU B 240 ALA matches A 52 ALA TRANSFORM -0.2565 0.0717 0.9639 0.9397 -0.2149 0.2660 0.2262 0.9740 -0.0123 43.394 8.801 23.294 Match found in 2cfs_m00 crystal structure of human pyridoxal Pattern 2cfs_m00 Query structure RMSD= 1.36 A No. of residues = 3 ------- ------- --------------- A 258 LEU matches A 13 LEU A 263 ARG matches A 41 ARG A 264 LEU matches A 44 LEU TRANSFORM -0.1873 -0.8643 0.4668 -0.9746 0.1042 -0.1981 0.1226 -0.4920 -0.8619 81.288 -27.204 21.867 Match found in 4ndy_d02 HUMAN MHF1-MHF2 DNA COMPLEX organis Pattern 4ndy_d02 Query structure RMSD= 1.37 A No. of residues = 3 ------- ------- --------------- V 13 GLU matches A 3 GLU V 17 ARG matches A 7 ARG V 35 LEU matches A 49 LEU TRANSFORM -0.5775 -0.7941 -0.1895 -0.6978 0.6006 -0.3903 0.4237 -0.0932 -0.9010 129.110 22.886 10.332 Match found in 4y4o_m00 Crystal structure of the Thermus the Pattern 4y4o_m00 Query structure RMSD= 1.37 A No. of residues = 3 ------- ------- --------------- A 11 GLU matches A 34 GLU A 12 ILE matches A 37 ILE A 17 ARG matches A 41 ARG TRANSFORM 0.6224 0.7221 0.3021 0.7318 -0.4000 -0.5518 -0.2776 0.5645 -0.7774 20.141 -16.525 26.940 Match found in 1azy_c00 THYMIDINE PHOSPHORYLASE Pattern 1azy_c00 Query structure RMSD= 1.38 A No. of residues = 3 ------- ------- --------------- A 85 HIS matches A 73 HIS A 171 ARG matches A 31 ARG A 190 LYS matches A 71 LYS TRANSFORM 0.1079 0.4554 -0.8837 0.8387 0.4356 0.3268 0.5337 -0.7765 -0.3350 199.357 -18.776 12.747 Match found in 7snz_m01 Crystal Structure of HIV-1 Reverse T Pattern 7snz_m01 Query structure RMSD= 1.38 A No. of residues = 3 ------- ------- --------------- A 380 ILE matches A 33 ILE B 401 TRP matches A 60 TRP B 404 GLU matches A 64 GLU TRANSFORM -0.0592 0.5585 -0.8274 0.8662 0.4407 0.2355 0.4961 -0.7028 -0.5099 -17.100 30.938 -54.191 Match found in 6zio_m00 CRYSTAL STRUCTURE OF NRAS (C118S) IN Pattern 6zio_m00 Query structure RMSD= 1.39 A No. of residues = 3 ------- ------- --------------- B 18 ALA matches A 59 ALA B 21 ILE matches A 16 ILE B 29 VAL matches A 56 VAL TRANSFORM 0.6716 -0.1507 0.7254 0.7229 0.3479 -0.5970 -0.1624 0.9253 0.3426 161.405 162.594 150.450 Match found in 8d3q_d00 TYPE I-C CAS4-CAS1-CAS2 COMPLEX BOUN Pattern 8d3q_d00 Query structure RMSD= 1.39 A No. of residues = 3 ------- ------- --------------- E 11 THR matches A 9 THR E 20 LEU matches A 10 LEU E 21 ARG matches A 7 ARG TRANSFORM 0.8630 -0.3292 -0.3831 -0.1303 -0.8779 0.4608 -0.4880 -0.3478 -0.8005 -19.096 10.147 -9.376 Match found in 8chx_m00 Structure and function of LolA from Pattern 8chx_m00 Query structure RMSD= 1.39 A No. of residues = 3 ------- ------- --------------- B 63 PHE matches A 53 PHE B 64 ARG matches A 51 ARG B 76 VAL matches A 50 VAL TRANSFORM 0.8577 0.4877 0.1626 0.4175 -0.8453 0.3333 0.3000 -0.2180 -0.9287 201.491 210.132 218.401 Match found in 7x74_d08 "Winged_helix"_DNA-binding_domain Pattern 7x74_d08 Query structure RMSD= 1.39 A No. of residues = 3 ------- ------- --------------- F 410 LEU matches A 13 LEU F 412 GLU matches A 14 GLU F 421 LEU matches A 44 LEU TRANSFORM 0.8290 0.5426 0.1353 -0.2603 0.5885 -0.7654 -0.4950 0.5993 0.6292 -40.723 47.722 67.547 Match found in 3oqm_d04 Periplasmic_binding_protein-like_I Pattern 3oqm_d04 Query structure RMSD= 1.40 A No. of residues = 3 ------- ------- --------------- C 53 ALA matches A 61 ALA C 56 LEU matches A 63 LEU C 57 ALA matches A 59 ALA TRANSFORM -0.9083 0.3679 -0.1993 -0.1516 -0.7333 -0.6628 -0.3899 -0.5718 0.7218 218.649 212.203 233.776 Match found in 7x74_d08 "Winged_helix"_DNA-binding_domain Pattern 7x74_d08 Query structure RMSD= 1.40 A No. of residues = 3 ------- ------- --------------- F 410 LEU matches A 63 LEU F 412 GLU matches A 64 GLU F 421 LEU matches A 72 LEU TRANSFORM -0.6603 -0.7110 -0.2420 0.6366 -0.3589 -0.6826 0.3984 -0.6047 0.6896 -2.263 -15.961 9.720 Match found in 1azy_c01 THYMIDINE PHOSPHORYLASE Pattern 1azy_c01 Query structure RMSD= 1.40 A No. of residues = 3 ------- ------- --------------- B 85 HIS matches A 73 HIS B 171 ARG matches A 31 ARG B 190 LYS matches A 71 LYS TRANSFORM 0.7382 0.2053 -0.6426 -0.3065 -0.7465 -0.5906 -0.6009 0.6329 -0.4881 -14.537 -12.912 -6.857 Match found in 4ibr_m00 Crystal structure of stabilized TEM- Pattern 4ibr_m00 Query structure RMSD= 1.41 A No. of residues = 3 ------- ------- --------------- A 36 GLU matches A 22 GLU A 60 ARG matches A 19 ARG B 36 GLU matches A 74 GLU TRANSFORM 0.7805 0.3259 0.5335 0.0310 0.8321 -0.5537 -0.6244 0.4487 0.6394 37.614 123.639 129.633 Match found in 3bsd_m00 Light harvesting protein from RC of Pattern 3bsd_m00 Query structure RMSD= 1.41 A No. of residues = 3 ------- ------- --------------- A 195 GLU matches A 17 GLU B 195 GLU matches A 18 GLU C 195 GLU matches A 14 GLU TRANSFORM 0.0304 0.8324 -0.5534 0.6249 -0.4480 -0.6394 -0.7801 -0.3264 -0.5338 39.797 121.908 130.083 Match found in 3bsd_m00 Light harvesting protein from RC of Pattern 3bsd_m00 Query structure RMSD= 1.41 A No. of residues = 3 ------- ------- --------------- A 195 GLU matches A 14 GLU B 195 GLU matches A 17 GLU C 195 GLU matches A 18 GLU TRANSFORM 0.6243 -0.4483 -0.6397 0.7806 0.3264 0.5331 -0.0302 -0.8322 0.5537 38.065 121.458 127.900 Match found in 3bsd_m00 Light harvesting protein from RC of Pattern 3bsd_m00 Query structure RMSD= 1.41 A No. of residues = 3 ------- ------- --------------- A 195 GLU matches A 18 GLU B 195 GLU matches A 14 GLU C 195 GLU matches A 17 GLU TRANSFORM 0.3638 0.8685 0.3368 0.5787 -0.4941 0.6489 0.7299 -0.0411 -0.6823 -22.082 5.106 -38.558 Match found in 8s87_m04 KOD-H4 DNA polymerase mutant - apo s Pattern 8s87_m04 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- A 216 PHE matches A 53 PHE A 217 ALA matches A 52 ALA A 250 VAL matches A 57 VAL TRANSFORM 0.8247 -0.3601 0.4362 0.5382 0.7366 -0.4095 -0.1738 0.5725 0.8013 18.795 55.115 15.588 Match found in 5zb4_m01 Crystal structure of thymidylate kin Pattern 5zb4_m01 Query structure RMSD= 1.42 A No. of residues = 3 ------- ------- --------------- A 61 GLU matches A 17 GLU A 104 ARG matches A 41 ARG A 148 GLU matches A 34 GLU TRANSFORM -0.8033 -0.4467 -0.3939 0.2160 -0.8349 0.5063 -0.5550 0.3217 0.7671 14.345 2.103 28.047 Match found in 2w1w_m00 Native structure of a family 35 carb Pattern 2w1w_m00 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- A 9 ALA matches A 52 ALA A 10 GLU matches A 54 GLU A 124 ASP matches A 48 ASP TRANSFORM -0.6183 0.5462 -0.5651 -0.0560 -0.7478 -0.6616 -0.7840 -0.3774 0.4929 -24.581 -11.126 -21.548 Match found in 5yuz_d01 DNA/RNA_polymerases Pattern 5yuz_d01 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- A 246 GLU matches A 17 GLU A 285 ARG matches A 7 ARG A 299 THR matches A 9 THR TRANSFORM 0.7007 0.3591 0.6164 0.5698 -0.8017 -0.1807 0.4293 0.4779 -0.7664 -13.512 10.960 -5.410 Match found in 8ipp_d00 Ankyrin_repeat Pattern 8ipp_d00 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- B 23 ARG matches A 51 ARG B 46 TYR matches A 36 TYR B 56 TYR matches A 42 TYR TRANSFORM 0.6522 0.7553 0.0642 -0.3465 0.2217 0.9115 0.6742 -0.6167 0.4063 40.187 -13.992 277.061 Match found in 7khs_m00 OgOGA IN COMPLEX WITH LIGAND 55 Pattern 7khs_m00 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- B 388 GLU matches A 18 GLU B 391 GLU matches A 14 GLU B 392 GLU matches A 17 GLU TRANSFORM 0.5161 -0.2108 -0.8302 0.0429 0.9744 -0.2208 0.8555 0.0783 0.5119 44.199 93.647 6.588 Match found in 1ahb_c00 rRNA N-glycosylase Pattern 1ahb_c00 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- A 71 ILE matches A 33 ILE A 160 GLU matches A 27 GLU A 163 ARG matches A 31 ARG TRANSFORM -0.2907 0.9240 0.2484 0.6361 0.3806 -0.6713 -0.7148 -0.0371 -0.6983 54.607 -85.529 61.937 Match found in 8cvl_m06 Crystal structure of the Thermus the Pattern 8cvl_m06 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- D 27 LEU matches A 10 LEU D 179 GLU matches A 17 GLU O 6 LEU matches A 13 LEU TRANSFORM 0.9839 -0.1126 0.1386 0.1301 -0.0797 -0.9883 0.1224 0.9904 -0.0638 -4.546 32.485 -5.437 Match found in 4pw7_d02 PUA_domain-like Pattern 4pw7_d02 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- E 475 VAL matches A 20 VAL E 520 ARG matches A 19 ARG E 521 ILE matches A 16 ILE TRANSFORM 0.9839 -0.1126 0.1386 0.1301 -0.0797 -0.9883 0.1224 0.9904 -0.0638 -4.546 32.485 -5.437 Match found in 4pw7_d01 PUA_domain-like Pattern 4pw7_d01 Query structure RMSD= 1.43 A No. of residues = 3 ------- ------- --------------- E 475 VAL matches A 20 VAL E 520 ARG matches A 19 ARG E 521 ILE matches A 16 ILE TRANSFORM 0.8974 -0.2551 0.3599 0.3979 0.8204 -0.4106 -0.1905 0.5117 0.8378 -0.236 -10.686 25.624 Match found in 3ld0_m00 Crystal structure of B.licheniformis Pattern 3ld0_m00 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- Y 51 ILE matches A 37 ILE Y 53 GLU matches A 34 GLU Z 151 ILE matches A 33 ILE TRANSFORM -0.8157 0.5106 -0.2720 -0.2814 0.0606 0.9577 0.5054 0.8577 0.0943 181.470 183.430 154.378 Match found in 6vvy_d07 MYCOBACTERIUM TUBERCULOSIS WT RNAP T Pattern 6vvy_d07 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- C 463 LEU matches A 44 LEU C 464 SER matches A 40 SER C 467 ARG matches A 41 ARG TRANSFORM 0.6112 -0.5524 0.5669 -0.0571 -0.7451 -0.6645 0.7894 0.3737 -0.4870 101.276 15.573 131.118 Match found in 5yuy_d01 DNA/RNA_polymerases Pattern 5yuy_d01 Query structure RMSD= 1.44 A No. of residues = 3 ------- ------- --------------- A 246 GLU matches A 17 GLU A 285 ARG matches A 7 ARG A 299 THR matches A 9 THR TRANSFORM 0.1329 0.1394 0.9813 0.7181 0.6689 -0.1923 -0.6832 0.7302 -0.0112 62.648 -96.460 58.757 Match found in 8cvl_m06 Crystal structure of the Thermus the Pattern 8cvl_m06 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- D 27 LEU matches A 63 LEU D 179 GLU matches A 74 GLU O 6 LEU matches A 67 LEU TRANSFORM -0.4693 0.6946 -0.5452 -0.8173 -0.1079 0.5660 0.3343 0.7113 0.6183 -35.079 -32.022 -4.611 Match found in 3v4i_d02 DNA/RNA_polymerases Pattern 3v4i_d02 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- C 61 PHE matches A 29 PHE C 63 ILE matches A 33 ILE C 74 LEU matches A 72 LEU TRANSFORM 0.2467 -0.8509 -0.4638 0.0413 -0.4689 0.8823 -0.9682 -0.2368 -0.0805 152.968 189.265 143.102 Match found in 8syi_d02 CYANOBACTERIAL RNAP-EC Pattern 8syi_d02 Query structure RMSD= 1.45 A No. of residues = 3 ------- ------- --------------- G 29 ALA matches A 35 ALA G 30 SER matches A 38 SER G 105 ILE matches A 33 ILE TRANSFORM 0.3872 0.3951 -0.8331 -0.9192 0.0952 -0.3821 -0.0716 0.9137 0.4001 41.009 -12.257 279.212 Match found in 7khs_m00 OgOGA IN COMPLEX WITH LIGAND 55 Pattern 7khs_m00 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- B 388 GLU matches A 17 GLU B 391 GLU matches A 18 GLU B 392 GLU matches A 14 GLU TRANSFORM 0.6080 -0.7881 0.0961 -0.2751 -0.3228 -0.9056 0.7447 0.5242 -0.4131 21.555 10.574 -8.370 Match found in 4ecw_d00 DNA/RNA_polymerases Pattern 4ecw_d00 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- A 322 SER matches A 40 SER A 378 LEU matches A 5 LEU A 382 ARG matches A 6 ARG TRANSFORM 0.6442 0.7358 -0.2091 0.2214 0.0822 0.9717 0.7321 -0.6722 -0.1100 -1.973 17.509 2.173 Match found in 2w1w_m00 Native structure of a family 35 carb Pattern 2w1w_m00 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- A 9 ALA matches A 35 ALA A 10 GLU matches A 34 GLU A 124 ASP matches A 39 ASP TRANSFORM 0.6110 0.6660 0.4279 -0.1850 -0.4054 0.8952 0.7697 -0.6262 -0.1245 -71.948 75.133 13.392 Match found in 6ojr_m01 Crystal structure of Sphingomonas pa Pattern 6ojr_m01 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- A 353 ARG matches A 19 ARG A 354 ILE matches A 23 ILE A 356 GLU matches A 74 GLU TRANSFORM -0.0814 -0.6521 -0.7538 0.6975 0.5030 -0.5104 0.7120 -0.5673 0.4139 19.580 90.808 43.534 Match found in 6j7q_m02 Crystal structure of toxin TglT (unu Pattern 6j7q_m02 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- A 216 GLU matches A 2 GLU A 219 LEU matches A 5 LEU A 286 ARG matches A 6 ARG TRANSFORM -0.5194 0.8520 -0.0654 -0.7485 -0.4905 -0.4464 -0.4124 -0.1828 0.8925 116.706 132.998 84.723 Match found in 8k87_d01 Ribonuclease_H-like Pattern 8k87_d01 Query structure RMSD= 1.46 A No. of residues = 3 ------- ------- --------------- B 415 THR matches A 9 THR B 416 PHE matches A 53 PHE B 442 ARG matches A 15 ARG TRANSFORM 0.7385 0.0330 -0.6735 -0.5924 0.5090 -0.6245 0.3222 0.8601 0.3954 139.416 160.345 194.802 Match found in 6eec_d05 MYCOBACTERIUM TUBERCULOSIS RNAP PROM Pattern 6eec_d05 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- C 398 ARG matches A 41 ARG C 402 GLU matches A 14 GLU F 309 ARG matches A 15 ARG TRANSFORM 0.8756 0.3525 -0.3304 -0.2226 -0.3126 -0.9234 -0.4288 0.8821 -0.1952 75.051 116.885 62.096 Match found in 6b44_d01 CRYO-EM STRUCTURE OF TYPE I-F CRISPR Pattern 6b44_d01 Query structure RMSD= 1.47 A No. of residues = 3 ------- ------- --------------- B 85 ARG matches A 6 ARG H 231 LEU matches A 10 LEU H 233 LEU matches A 13 LEU TRANSFORM 0.1802 0.8263 -0.5336 -0.9153 0.3396 0.2167 0.3603 0.4494 0.8175 178.316 168.379 127.039 Match found in 8d3m_d02 TTP0101/SSO1404-like Pattern 8d3m_d02 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- F 11 THR matches A 9 THR F 20 LEU matches A 44 LEU F 21 ARG matches A 41 ARG TRANSFORM 0.1802 0.8263 -0.5336 -0.9153 0.3396 0.2167 0.3603 0.4494 0.8175 178.316 168.379 127.039 Match found in 8d3m_d01 TYPE I-C CAS4-CAS1-CAS2 COMPLEX BOUN Pattern 8d3m_d01 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- F 11 THR matches A 9 THR F 20 LEU matches A 44 LEU F 21 ARG matches A 41 ARG TRANSFORM -0.4178 0.9084 -0.0171 0.4257 0.1791 -0.8869 -0.8026 -0.3779 -0.4616 2.176 39.273 20.714 Match found in 6cbs_m00 DnaG Primase C-terminal domain compl Pattern 6cbs_m00 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- A 476 GLU matches A 2 GLU A 486 ARG matches A 6 ARG A 487 GLU matches A 3 GLU TRANSFORM -0.4239 0.8927 0.1531 -0.9042 -0.4269 -0.0142 0.0527 -0.1444 0.9881 56.880 -0.102 -42.339 Match found in 6j7s_m00 Crystal structure of toxin TglT (unu Pattern 6j7s_m00 Query structure RMSD= 1.48 A No. of residues = 3 ------- ------- --------------- A 267 LEU matches A 5 LEU A 269 LEU matches A 49 LEU A 271 ARG matches A 6 ARG TRANSFORM -0.1239 0.5638 0.8166 -0.4489 0.7021 -0.5528 -0.8850 -0.4350 0.1661 14.279 -7.658 15.372 Match found in 8dq3_m00 X-ray crystal structure of Aggregati Pattern 8dq3_m00 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- A 194 GLU matches A 8 GLU A 198 LYS matches A 11 LYS A 299 GLU matches A 4 GLU TRANSFORM 0.8674 0.3517 0.3520 0.3622 -0.9313 0.0380 0.3412 0.0945 -0.9352 153.014 139.703 167.444 Match found in 7z9m_d00 Type_II_DNA_topoisomerase Pattern 7z9m_d00 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- C 32 ARG matches A 41 ARG C 84 ALA matches A 52 ALA C 174 ILE matches A 33 ILE TRANSFORM -0.1353 -0.7348 -0.6647 0.6382 -0.5777 0.5088 -0.7579 -0.3554 0.5471 -6.213 -10.077 37.153 Match found in 1ea7_m02 Sphericase Pattern 1ea7_m02 Query structure RMSD= 1.49 A No. of residues = 3 ------- ------- --------------- A 186 ALA matches A 61 ALA A 188 ALA matches A 59 ALA A 220 ILE matches A 16 ILE